mRNA_H-paniculata_contig2836.7738.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Match: A0A6H5JZW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW8_9PHAE) HSP 1 Score: 880 bits (2273), Expect = 1.800e-294 Identity = 424/544 (77.94%), Postives = 471/544 (86.58%), Query Frame = 1
Query: 496 NVADCIKPGCESEGVLVVCDNCVGAVHLECADPPMIQIPAEFYLCENCRGMCSICLNENKRD-TDIRCHQCFRLYHSSCLDSVPDSDNFHWMCSTCIESDQLKASQCLLCLIVETILHCRTHKPMDPAVRLKRVNAFRKKKEFPPLTSVELKNVKSPYRGREYLVRWEGKAYWHCTWLVPYLLQRKSAMKLNNFIKKTHGVLTAFPQSVDQVLLNECKPKCTIPHRVIARSTKCMDGVSEQSLYLVKWRGLEYEEATWEMEGDLEDWMHLVEEFKEREEHGPVKQMLGNLHPPEDWDGETPLTKPTRFEMLMGQPWGLHRGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTIAFVRSILLERPLNEHRPCLVLCPLSTTDNWERELEGWCPDLNCVRFVGNVKSRTVALEHELFQDPDNNPGGASWDGGAGSSVGRHRNAKGKGKQRAGAAGKGGVVRAGIPKFHVMITHYEMLLQCAHVLKAIKWELLIVDEAHRLKAGATSKVCQLTDSLDTQHRLLLTGTPLQNTVSSFLSLLQ 2124
N ADC+KPGCES+G+LVVCD+CVGAVHLECADPPMIQ+PAEFYLCENCRGMCSICL+ KRD TD+RC QC+RL+HSSCLDSVPD DNFHWMCS C+ES++LK VETILHCR+HKPM+ VRL RVN+FR+KK PP+TS L+++ S YRGREY VRWEGKAYWHCTWL P LLQRKSA KLNNFIKKT G LTAFP+S DQVLL E KP+CT+PHRVIAR TKCMDG++ QS+YLVKWRGLEYEE TWEMEGDLE + HLVE F +RE++GP ++MLGNLHPPE WD TPL KPTRFE+L QPWGL +GPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQT+AFVRSIL ERP +EHRP LV+CPLSTTDNWERELE WCP+LNCVRFVGN+KSRTVALEHELFQD D G W+G A S GR R KGK KQRAGAAGKGGVV+AG+PKFHVMITHYEMLLQC+H+LKAIKWELL+VDEAHRLKAGATSKVCQLT SLDT+HRLLLTGTPLQNTV +LLQ
Sbjct: 257 NEADCVKPGCESDGMLVVCDHCVGAVHLECADPPMIQVPAEFYLCENCRGMCSICLDTAKRDDTDVRCFQCYRLFHSSCLDSVPDPDNFHWMCSECVESEELK---------VETILHCRSHKPMNAVVRLARVNSFREKKGLPPITSRGLRSIDSSYRGREYFVRWEGKAYWHCTWLSPELLQRKSAAKLNNFIKKTEGTLTAFPESRDQVLLKEYKPRCTLPHRVIARRTKCMDGITLQSMYLVKWRGLEYEECTWEMEGDLEGYPHLVEAFLDREKYGPTREMLGNLHPPEGWDRVTPLPKPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALEHELFQDGDGGVG-VQWEGAA-SPRGRTR--KGKSKQRAGAAGKGGVVKAGVPKFHVMITHYEMLLQCSHILKAIKWELLVVDEAHRLKAGATSKVCQLTASLDTRHRLLLTGTPLQNTVDELFNLLQ 787
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Match: D7G7A4_ECTSI (Similar to chromodomain helicase DNA binding protein 4 isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A4_ECTSI) HSP 1 Score: 840 bits (2171), Expect = 7.300e-279 Identity = 408/544 (75.00%), Postives = 453/544 (83.27%), Query Frame = 1
Query: 496 NVADCIKPGCESEGVLVVCDNCVGAVHLECADPPMIQIPAEFYLCENCRGMCSICLNENKRD-TDIRCHQCFRLYHSSCLDSVPDSDNFHWMCSTCIESDQLKASQCLLCLIVETILHCRTHKPMDPAVRLKRVNAFRKKKEFPPLTSVELKNVKSPYRGREYLVRWEGKAYWHCTWLVPYLLQRKSAMKLNNFIKKTHGVLTAFPQSVDQVLLNECKPKCTIPHRVIARSTKCMDGVSEQSLYLVKWRGLEYEEATWEMEGDLEDWMHLVEEFKEREEHGPVKQMLGNLHPPEDWDGETPLTKPTRFEMLMGQPWGLHRGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTIAFVRSILLERPLNEHRPCLVLCPLSTTDNWERELEGWCPDLNCVRFVGNVKSRTVALEHELFQDPDNNPGGASWDGGAGSSVGRHRNAKGKGKQRAGAAGKGGVVRAGIPKFHVMITHYEMLLQCAHVLKAIKWELLIVDEAHRLKAGATSKVCQLTDSLDTQHRLLLTGTPLQNTVSSFLSLLQ 2124
N ADC+KPGCES+G+LVVCD+CVGAVHLECADPPMIQ+PAEFYLCE+CRGMCSICL+ KRD TD+RC QC+RL+HSSCLD VPD DNFHWMC C+ES++LK VETILHCR+HKPMD AVRL RVN+FR+KK PP+TS L+++ S YRGREY VRWEGKAYWHCTWL P LLQRKSA KLNNFIKKT G LTAFP+S DQVLL E KP+CT+PHRVIAR TKCMDG++ QS+YLVKWRGLEYEE TWEMEGDLE + HLVE F +RE++GP K+MLGNLHPPE WD TPL KPTRFE+L QPWGL +GPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQT+AFVRSIL ERP +EHRP LV+CPLSTTDNWERELE WCP+LNCVRFVGN+KSRTVALEHELFQD D G W+G A S GR R K G+PKFHVMITHYEMLLQC+H+LKAIKWELL+VDEAHRLKAGATSKVCQLT SLDT+HRLLLTGTPLQNTV +LLQ
Sbjct: 305 NEADCVKPGCESDGMLVVCDHCVGAVHLECADPPMIQVPAEFYLCESCRGMCSICLDTAKRDDTDVRCFQCYRLFHSSCLDRVPDPDNFHWMCLECVESEELK---------VETILHCRSHKPMDAAVRLARVNSFREKKGLPPITSRGLRSIDSSYRGREYFVRWEGKAYWHCTWLSPELLQRKSAAKLNNFIKKTEGTLTAFPESRDQVLLKEYKPRCTLPHRVIARRTKCMDGITLQSMYLVKWRGLEYEECTWEMEGDLEGYPHLVEAFLDREKYGPTKEMLGNLHPPEGWDRVTPLPKPTRFELLTEQPWGLRQGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTLAFVRSILHERPSSEHRPVLVICPLSTTDNWERELEMWCPELNCVRFVGNMKSRTVALEHELFQDGDGGVG-VQWEGAA-SRSGRTR--KXXXXXXXXXXXXXXXXXXGVPKFHVMITHYEMLLQCSHILKAIKWELLVVDEAHRLKAGATSKVCQLTASLDTRHRLLLTGTPLQNTVDELFNLLQ 835
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Match: A0A7R9U7G4_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7G4_9STRA) HSP 1 Score: 256 bits (654), Expect = 8.810e-69 Identity = 182/543 (33.52%), Postives = 261/543 (48.07%), Query Frame = 1
Query: 523 CESEGVLVVCDNCVGAVHLECADP-PMIQIPAEFYLCENC--RGMCSICLNENKRDTDIRCHQCFRLYHSSCLDSVPDSDNFHWMCSTCIESDQLKASQCLLCLIVETILHCRTHKPMDPAVRLKRVNAFRKKKEFPPLTSVELKNVKSPYRGREYLVRWEGKAYWHCTWLVPYLLQRKSAMKLNNFIKKTHGVLTAFPQSVDQVLLNECKPKCTIPHRVIARSTKCMDGVSEQSLYLVKWRGLEYEEATWEMEGDLEDWMHLVEEFKEREEHGPVKQMLGNLHPPEDWDGETPLTKPTRFEMLMGQPWGLHRG-PMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTIAFVRSILLERPLNEH------RPCLVLCPLSTTDNWERELEGWCPDLNCVRFVGNVKSRTVALEHELFQDPDNNPGGASWDGGAGSSVGRHRNAKGKGKQRAGAAGKGGVVRAGIPKFHVMITHYEMLLQCAHVLKAIKWELLIVDEAHRLKAGATSKVCQLTDSLDTQHRLLLTGTPLQNTVSSFLSLL 2121
C EG ++VC+ C H C P P+ ++P E + C C R C +C K RC C R YH CL W+C+ C E + I + L T DPA + ++ KE P V +++LV W+G+++ H +W+ +Q +A KL N+ + T +++ + + PHRVI+ C+DG+ Q LVKWRG+ Y++ TWE +L D L+E F R VK +L P + L + F P + ++ YQLEG+N+LRQ+WW+ T+VILADEMGLGKTIQ+ F RSIL E+ RP LV+ PLST +NWERE W P+LN + F G+ SR ++EL W S+ AKG R AA + + + P FHV +T YE+ + +L+ I+WE LIVDE HRLK G + K+ Q +L ++LLTGTPLQN++ +LL
Sbjct: 47 CGLEGEVLVCETCPRVYHQACTRPVPLTKVPEEHWQCSACQDRKQCCVC---RKPGATHRCAHCLRQYHRHCLVWESVEPVQAWLCTMCQEKSTVHK-------IYSSRLFKETRAKYDPA------DPTKEPKENPDAPLV-----------KQFLVHWKGRSFRHLSWVNREHMQILAAHKLRNYERANPFTPTVSYDALEDLEFHNINATWKQPHRVISAKWVCLDGLEMQRFLLVKWRGVSYDDVTWEPAQELADARELIEAFDRR----CVKYRGFDLKP-------SGLGRQKAFRPFSEDPQFIPEDLKLHDYQLEGVNWLRQAWWNETSVILADEMGLGKTIQSATFSRSILEEQVWRSKQEGHTLRPILVVAPLSTLENWEREFALWAPELNVIVFTGDRSSREKIQKYEL-----------DWPV---KSL-----AKGTEAYRRAAAAETQISQMRWP-FHVFLTSYELAKGESKLLRKIEWESLIVDEGHRLKGGVSGKLFQELVTLPAFQKVLLTGTPLQNSMEELFNLL 531
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Match: A0A1B6MKX7_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6MKX7_9HEMI) HSP 1 Score: 237 bits (604), Expect = 9.510e-64 Identity = 185/593 (31.20%), Postives = 262/593 (44.18%), Query Frame = 1
Query: 523 CESEGVLVVCDNCVGAVHLECADPPMIQIPAEFYLCENC-------------RGMCSICLNENKRDTDIRCHQCFRLYHSSCLD----SVPDSDNFHWMCSTCIESDQLKASQCLLCLIVETILHCRTHKPMDPAVRLKRVNAFRKKKEFPPLTSVELKNVKSPYRGREYLVRWEGKAYWHCTWLVPYLLQRKSAMKLNNFIKK------------THGVLTAFPQSVDQVLLNEC----------KPKCTIPHRVIARSTKCMDGVSEQSLYLVKWRGLEYEEATWEMEGD-LEDWMHLVEEFKE----------REEHGPVKQMLGNLHPPEDWDGETP--LTKP-----TRFEMLMG-QPWGLHRGPM--YPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTIAFVRSILLERPLNEHRPCLVLCPLSTTDNWERELEGWCPDLNCVRFVGNVKSRTVALEHELFQDPDNNPGGASWDGGAGSSVGRHRNAKGKGKQRAGAAGKGGVVRAGIPKFHVMITHYEMLLQCAHVLKAIKWELLIVDEAHRLKAGATSKVCQLTDSLDTQHRLLLTGTPLQNTVSSFLSLL 2121
C+ G +++CD C A HL C DP + P + C +C + C +C + + + C C YH+ CL+ +PD D W C C +Q +L T+ ++ + + K K P R REY V+W K+YWHC W+ ++ + + ++ +K + T + D + +C KP+ I HR+I T DG LYLVKWR L Y++ATWE E D + H +E +++ R++ G K+ E+ D P T P T + QP + + M +PYQLEGLN+LR SW T+ ILADEMGLGKTIQTI F+ S+ E P LV PLST NWERE E W PD C+ +VG+ SR V EHEL D N GG + G +R KFHV++T YE++ L +I+W +L+VDEAHRLK+ SK ++ S + ++LLLTGTPLQN + LL
Sbjct: 156 CQQGGEIILCDTCPRAYHLVCLDPELEDTPEGKWSCPHCETEGTQEQDDDEHQEFCRVCKDGGEL---LCCDSCPAAYHTHCLNPPLTDIPDGD---WKCPRCSAKPLKGKAQKILTWRWVTVPDTKSAEEASSSTTKK----------------------KRPTRTREYFVKWYEKSYWHCDWVSEIQMEVFHPLMIRSYTRKYDMDEPPKLEEPLDEMDTRMKRIRDFSINEQCLEEKYYRYGVKPEWLIAHRIINHRTM-RDGTM---LYLVKWRDLSYDQATWEEESDSIPGLKHAIEYYQDLRAANNFEGTRKKKGKGKKTKAREIADEELDPRLPRRYTPPPDKPITDLKKKYDKQPDFIEQTGMMLHPYQLEGLNWLRYSWGQGTDTILADEMGLGKTIQTITFLYSLYKEGHCKG--PFLVSAPLSTIINWEREFETWAPDFYCITYVGDKDSRAVIREHELSFDESANRGG-----------------------------RAGRMRTNNLKFHVLLTSYELISIDVTCLGSIEWAVLVVDEAHRLKSNQ-SKFFRILASYNIAYKLLLTGTPLQNNLEELFHLL 684
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Match: A0A1B6JYG4_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6JYG4_9HEMI) HSP 1 Score: 227 bits (579), Expect = 4.980e-60 Identity = 184/582 (31.62%), Postives = 255/582 (43.81%), Query Frame = 1
Query: 523 CESEGVLVVCDNCVGAVHLECADPPMIQIPAEFYLCENC-------------RGMCSICLNENKRDTDIRCHQCFRLYHSSCLD----SVPDSDNFHWMCSTCIESDQLKASQCLLCLIVETILHCRTHKPMDPAVRLKRVNAFRKKKEFPPLTSVELKNVKSPYRGREYLVRWEGKAYWHCTWLVPYLLQRKSAMKLNNFIKK----------------THGVLTAFPQSVDQVLLNE------CKPKCTIPHRVIARSTKCMDGVSEQSLYLVKWRGLEYEEATWEMEGDLEDWMHLVEEFKE-----------REEHGPVKQMLGNLHPPEDWDGETP--LTKP-----TRFEMLMG-QPWGLHRGPM--YPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTIAFVRSILLERPLNEHRPCLVLCPLSTTDNWERELEGWCPDLNCVRFVGNVKSRTVALEHELFQDPDNNPGGASWDGGAGSSVGRHRNAKGKGKQRAGAAGKGGVVRAGIPKFHVMITHYEMLLQCAHVLKAIKWELLIVDEAHRLKAGATSKVCQLTDSLDTQHRLLLTGTPL 2088
C+ G +++CD C A HL C DP + P + C +C + C +C + + + C C YH+ CL+ +PD D W C C + LK + IL R D K +S K P R REY V+W K+YWHC W+ ++ + + ++ +K + + S+++ L E KP+ I HR+I T DG + LYLVKWR L Y++ATWE E D + E+ R++ G K+ E+ D P T P T + QP + + M +PYQLEGLN+LR SW T+ ILADEMGLGKTIQTI F+ S+ E P LV PLST NWERE E W PD C+ +VG+ SR V EHEL D N GG + G +R KFHV++T YE++ L +I+W +L+VDEAHRLK+ SK ++ S + ++LLLTGTPL
Sbjct: 371 CQQGGEIILCDTCPRAYHLVCLDPELEDTPEGKWSCPHCETEGTQEQDDDEHQEFCRVCKDGGEL---LCCDSCPAAYHTHCLNPPLTDIPDGD---WKCPRC-SAKPLKGK-------AQKILTWRWVNVPD-------------NKATEEASSSTTSKKKRPTRTREYFVKWYEKSYWHCDWVSEIQMEVFHPLMIRSYTRKYDMDEPPKLEEPLDEMDNRMKRIRDFSINEQSLEEKYYRYGVKPEWLIAHRIINHRTM-RDGTT---LYLVKWRDLSYDQATWEEENDEVPGLKPAIEYYHDLRAANNFEGTRKKKGKGKKTKAREIADEELDPRLPRRYTPPPDKPITDLKKKYDKQPDFIEQTGMMLHPYQLEGLNWLRYSWGQGTDTILADEMGLGKTIQTITFLYSLYKEGHCKG--PFLVSAPLSTIINWEREFETWAPDFYCITYVGDKDSRAVIREHELSFDESANRGG-----------------------------RAGRMRTNNLKFHVLLTSYELISIDVTCLGSIEWAVLVVDEAHRLKSNQ-SKFFRILASYNIAYKLLLTGTPL 889
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Match: A0A1S4DCC2_TOBAC (CHD3-type chromatin-remodeling factor PICKLE-like n=2 Tax=Nicotiana TaxID=4085 RepID=A0A1S4DCC2_TOBAC) HSP 1 Score: 221 bits (562), Expect = 1.820e-59 Identity = 142/390 (36.41%), Postives = 201/390 (51.54%), Query Frame = 1
Query: 973 REYLVRWEGKAYWHCTW------LVPYLLQRKSAMKLNNFIKKTHGVLTAFPQSVDQVLLNECKPKCTIPHRVIARSTKCMDGVSEQSLYLVKWRGLEYEEATWEMEGDLEDWMHLVEEF-KEREEHGPVKQMLGNLHPPEDWDGETPLTKPTRFEMLMGQPWGLHRGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTIAFVRSILLERPLNEHRPCLVLCPLSTTDNWERELEGWCPDLNCVRFVGNVKSRTVALEHELFQDPDNNPGGASWDGGAGSSVGRHRNAKGKGKQRAGAAGKGGVVRAGIPKFHVMITHYEMLLQCAHVLKAIKWELLIVDEAHRLKAGATSKVCQLTDSLDTQHRLLLTGTPLQNTVSSFLSLL 2121
++YLV+W+G +Y HCTW L Y + K+NNF H +++ S ++ + +P+ T R++AR G E+ YLVKW+ L Y+E WE E D+ + H +E F + + + + G L + + K F+ P L G ++PYQLEGLNFLR +W T+VILADEMGLGKTIQ+IAF+ S+ E P LV+ PLST NWERE W P +N V +VG ++R + ++E F +N K K+++G K R KF V++T YEM+ + LK IKWE +IVDE HRLK SK+ T+HR+LLTGTPLQN + L+
Sbjct: 130 KQYLVKWKGLSYLHCTWVPEKDFLKAYKAHPRLKTKVNNF----HRQMSSMTNSEEEYVA--IRPEWTTVDRILARR-----GDGEEKEYLVKWKELPYDECYWEFESDISSFQHEIERFHRVQSRYKKSSKQKGELKETTESN-----KKAKEFQQYESSPEFLSGGSLHPYQLEGLNFLRFAWSKQTHVILADEMGLGKTIQSIAFLASLFKENV----SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGGAQARAIIRQYEFFFP---------------------KNLKKSKKKKSGQTVKSKQDRI---KFDVLLTSYEMINMDSASLKPIKWECMIVDEGHRLK-NKDSKLFSTLKQYSTRHRVLLTGTPLQNNLDELFMLM 474
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Match: A9TI22_PHYPA (SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9TI22_PHYPA) HSP 1 Score: 225 bits (574), Expect = 1.480e-58 Identity = 173/509 (33.99%), Postives = 249/509 (48.92%), Query Frame = 1
Query: 631 ENCRGMCSICLNENKRDTDIRCHQCFRLYHSSCLDS----VPDSDNFHWMCSTCIE--SDQLKASQCLLCLIVETILHCRTHKPMDPAVRLKRVNAFRKKKEFPPLTSVELKNVKSPYRGREYLVRWEGKAYWHCTWLVPYLLQRKSA------MKLNNFIKKTHGVLTAFPQSVDQVLLNECKPKCTIPHRVIARSTKCMDGVSEQSLYLVKWRGLEYEEATWEMEGDLEDWMHLVEEFKEREEHGPVKQMLGNLHPPEDWDGETPLTKPTRFEMLMGQPWGLHRGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTIAFVRSILLERPLNEHRPCLVLCPLSTTDNWERELEGWCPDLNCVRFVGNVKSRTVALEHELFQDPDNNPGGASWDGGAGSSVGRHRNAKGKGKQRAGAAGKGGVVRAGIPKFHVMITHYEMLLQCAHVLKAIKWELLIVDEAHRLKAGATSKVCQLTDSLDTQHRLLLTGTPLQNTVSSFLSLL 2121
E CSIC + + C C ++H CLD VP W C C+ D K ++T + +PM R+ NA K E P P ++YLV+W+ ++Y HC+W+ L+R MKLN+F K G D++ + +P+ T RV+ M + + YLVKW+ L Y+EATWE+E D+ + V++FKE +K+ G+ D + + F+ P L G ++PYQLEGLNFLR +W N +VILADEMGLGKTIQ+I+ + S++ E N P LV+ PLST NWERE WCP +N V +VG+ ++R + ++E F ++ + +K KGK++ K V KF V++T YEM+ +LKA+KWE LIVDE HRLK SK+ Q + T+HR+LLTGTPLQN + L+
Sbjct: 50 EQSEDFCSIC---HLGGDLLCCDTCTAVFHLGCLDPPMKVVPRGK---WSCPKCVNPLGDVEK--------FIDTQM-----RPMKVPGRIAH-NAEEKVSEDQP-----------PKLVKQYLVKWKSRSYLHCSWVTAEDLERGMKTFAGLRMKLNHFHKMLDGSKNWNTPDEDRMPI---RPEWTTVDRVLD-----MRHNGDITEYLVKWKELGYDEATWEVEEDVLAFQAEVDKFKEIMSRQALKKRKGSA-----LDNKDLKRRRKDFKPFKKTPKFLVGGSLHPYQLEGLNFLRFAWEQNKHVILADEMGLGKTIQSISLLGSLIEE---NVGLPHLVVAPLSTLRNWEREFATWCPQMNVVMYVGSSQARAILRQYEFFFPQKSS-----------------KKSKDKGKKKMAGESKQDRV-----KFDVLLTSYEMINLDTTILKALKWECLIVDEGHRLK-NKDSKLFQTLTTFSTRHRVLLTGTPLQNNLDELFMLM 488
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Match: A0A2K1IRI0_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IRI0_PHYPA) HSP 1 Score: 225 bits (574), Expect = 1.900e-58 Identity = 174/507 (34.32%), Postives = 249/507 (49.11%), Query Frame = 1
Query: 631 ENCRGMCSICLNENKRDTDIRCHQCFRLYHSSCLDS----VPDSDNFHWMCSTCIESDQLKASQCLLCLIVETILHCRTHKPMDPAVRLKRVNAFRKKKEFPPLTSVELKNVKSPYRGREYLVRWEGKAYWHCTWLVPYLLQRKSA------MKLNNFIKKTHGVLTAFPQSVDQVLLNECKPKCTIPHRVIARSTKCMDGVSEQSLYLVKWRGLEYEEATWEMEGDLEDWMHLVEEFKEREEHGPVKQMLGNLHPPEDWDGETPLTKPTRFEMLMGQPWGLHRGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTIAFVRSILLERPLNEHRPCLVLCPLSTTDNWERELEGWCPDLNCVRFVGNVKSRTVALEHELFQDPDNNPGGASWDGGAGSSVGRHRNAKGKGKQRAGAAGKGGVVRAGIPKFHVMITHYEMLLQCAHVLKAIKWELLIVDEAHRLKAGATSKVCQLTDSLDTQHRLLLTGTPLQNTVSSFLSLL 2121
E CSIC + + C C ++H CLD VP W C C +D L VE + + +PM R+ NA K E P P ++YLV+W+ ++Y HC+W+ L+R MKLN+F K G D++ + +P+ T RV+ M + + YLVKW+ L Y+EATWE+E D+ + V++FKE +K+ G+ D + + F+ P L G ++PYQLEGLNFLR +W N +VILADEMGLGKTIQ+I+ + S++ E N P LV+ PLST NWERE WCP +N V +VG+ ++R + ++E F ++ + +K KGK++ K V KF V++T YEM+ +LKA+KWE LIVDE HRLK SK+ Q + T+HR+LLTGTPLQN + L+
Sbjct: 71 EQSEDFCSIC---HLGGDLLCCDTCTAVFHLGCLDPPMKVVPRGK---WSCPKC--ADPLGD--------VEKFIDTQM-RPMKVPGRIAH-NAEEKVSEDQP-----------PKLVKQYLVKWKSRSYLHCSWVTAEDLERGMKTFAGLRMKLNHFHKMLDGSKNWNTPDEDRMPI---RPEWTTVDRVLD-----MRHNGDITEYLVKWKELGYDEATWEVEEDVLAFQAEVDKFKEIMSRQALKKRKGSA-----LDNKDLKRRRKDFKPFKKTPKFLVGGSLHPYQLEGLNFLRFAWEQNKHVILADEMGLGKTIQSISLLGSLIEE---NVGLPHLVVAPLSTLRNWEREFATWCPQMNVVMYVGSSQARAILRQYEFFFPQKSS-----------------KKSKDKGKKKMAGESKQDRV-----KFDVLLTSYEMINLDTTILKALKWECLIVDEGHRLK-NKDSKLFQTLTTFSTRHRVLLTGTPLQNNLDELFMLM 509
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Match: A0A2G3BRM4_CAPCH (CHD3-type chromatin-remodeling factor PICKLE n=3 Tax=Capsicum TaxID=4071 RepID=A0A2G3BRM4_CAPCH) HSP 1 Score: 219 bits (557), Expect = 3.400e-58 Identity = 144/389 (37.02%), Postives = 203/389 (52.19%), Query Frame = 1
Query: 973 REYLVRWEGKAYWHCTW------LVPYLLQRKSAMKLNNFIKKTHGVLTAFPQSVDQVLLNECKPKCTIPHRVIARSTKCMDGVSEQSLYLVKWRGLEYEEATWEMEGDLEDWMHLVEEFKEREEHGPVKQMLGNLHPPEDWDGETPLTKPTRFEMLMGQPWGLHRGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTIAFVRSILLERPLNEHRPCLVLCPLSTTDNWERELEGWCPDLNCVRFVGNVKSRTVALEHELFQDPDNNPGGASWDGGAGSSVGRHRNAKGKGKQRAGAAGKGGVVRAGIPKFHVMITHYEMLLQCAHVLKAIKWELLIVDEAHRLKAGATSKVCQLTDSLDTQHRLLLTGTPLQNTVSSFLSLL 2121
++YLV+W+G +Y HCTW L Y + K+NNF ++ +++ S D+ + +P+ T R++AR G E+ YLVKW+ L Y+E WE E D+ + H +E F+ + P E + K F+ P L G ++PYQLEGLNFLR +W T+VILADEMGLGKTIQ+IAF+ S L E ++ H LV+ PLST NWERE W P +N V +VG ++R + E+ELF P+N + K K Q G + + + KF V++T YEM+ + LK IKWE +IVDE HRLK SK+ ++HR+LLTGTPLQN + L+
Sbjct: 202 KQYLVKWKGLSYLHCTWVPEKEFLKAYKAYPRLKTKVNNFQRQ----MSSMTNSEDEYVA--IRPEWTTVDRLLARR-----GDGEEREYLVKWKELPYDECYWEFESDISSFQHEIERFRIVQSRHKKSSSKQKGRPIETTESNK---KAKEFQQYESSPEFLSGGSLHPYQLEGLNFLRFAWSKQTHVILADEMGLGKTIQSIAFLAS-LFEENVSPH---LVVAPLSTLRNWEREFATWAPQMNVVMYVGGAQARAIIREYELFF-PNN----------------LKKTKKKKSGQMVGESKQDRI------KFDVLLTSYEMINMDSASLKPIKWECMIVDEGHRLK-NKDSKLFSSLKQYSSRHRVLLTGTPLQNNLDELFMLM 548
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Match: A0A7N0TB11_KALFE (Uncharacterized protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TB11_KALFE) HSP 1 Score: 224 bits (571), Expect = 4.180e-58 Identity = 172/502 (34.26%), Postives = 237/502 (47.21%), Query Frame = 1
Query: 643 GMCSICLNENKRDTDIRCHQCFRLYHSSCLDSVPD-SDNFHWMCSTCIE--SDQLKASQCLLCLIVETILHCRTHKPMDPAVRLKRVNAFRKKKEFPPLTSVELKNVKSPYRGREYLVRWEGKAYWHCTWLVP--YLLQRKSAMKLNNFIKKTHGVLTAFPQSVDQVLLNECKPKCTIPHRVIARSTKCMDGVSEQSLYLVKWRGLEYEEATWEMEGDLEDWMHLVE---EFKEREEHGPV-KQMLGNLHPPEDWDGETPLTKPTRFEMLMGQPWGLHRGPMYPYQLEGLNFLRQSWWSNTNVILADEMGLGKTIQTIAFVRSILLERPLNEHRPCLVLCPLSTTDNWERELEGWCPDLNCVRFVGNVKSRTVALEHELFQDPDNNPGGASWDGGAGSSVGRHRNAKGKGKQRAGAAGKGGVVRAGIPKFHVMITHYEMLLQCAHVLKAIKWELLIVDEAHRLKAGATSKVCQLTDSLDTQHRLLLTGTPLQNTVSSFLSLL 2121
G+C C E + + C C +YHS CL P +W C C+ +D VE IL C M P V + + L S +L ++YLV+W+G +Y HCTW+ +L +S +L + H + S+D+ + +P+ R+IA C G EQ YLVKW+ L Y+E WE E DL + +E +F R + KQ NL E P K F+ P + G ++PYQLEGLNFLR SW+ T+VILADEMGLGKTIQ+IAF+ S+ + P LV+ PLST NWERE W P +N V +VG ++R V E E + +H++ K K K G+ K + KFHV++T YEM+ + L+ IKWE LIVDE HRLK + L + +HR+LLTGTPLQN + L+
Sbjct: 50 GLCQACGEEGEL---LSCETCTYVYHSKCLLPPPKVQPPENWKCPECVSPLND------------VEKILDCE----MRPTVA--------SESDASTLGSNQL-------FVKQYLVKWKGLSYLHCTWVPEKEFLKAFRSLPRLKTKVNNFHRQMET-TNSLDEEFI-AIRPEWVTVDRIIA----CR-GTDEQKEYLVKWKELGYDECHWESESDLSAFQPEIENFHKFNSRSRNSSASKQKSPNLETAE------PSKKQKEFQPYEDGPEFISGGSLHPYQLEGLNFLRYSWFKETHVILADEMGLGKTIQSIAFLASLFEDNV----SPFLVIAPLSTLRNWEREFAKWAPQMNVVMYVGTAQARAVIKEREFYFTK------------------KHKSNKKK-KSSQGSESKQARI-----KFHVLLTSYEMINNDSMTLRPIKWECLIVDEGHRLKNKESKLFLSLAQYMS-RHRVLLTGTPLQNNLQELFMLM 475 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2836.7738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2836.7738.1 >prot_H-paniculata_contig2836.7738.1 ID=prot_H-paniculata_contig2836.7738.1|Name=mRNA_H-paniculata_contig2836.7738.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=708bp KRPASADASSSSPPAKRAPKIKLSNPKALSQTPTMNMASSVAEAAAARGRback to top mRNA from alignment at H-paniculata_contig2836:591..15364- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2836.7738.1 ID=mRNA_H-paniculata_contig2836.7738.1|Name=mRNA_H-paniculata_contig2836.7738.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14774bp|location=Sequence derived from alignment at H-paniculata_contig2836:591..15364- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2836:591..15364- >mRNA_H-paniculata_contig2836.7738.1 ID=mRNA_H-paniculata_contig2836.7738.1|Name=mRNA_H-paniculata_contig2836.7738.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4248bp|location=Sequence derived from alignment at H-paniculata_contig2836:591..15364- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |