prot_H-paniculata_contig2834.7736.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2834.7736.1
Unique Nameprot_H-paniculata_contig2834.7736.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length132
Homology
BLAST of mRNA_H-paniculata_contig2834.7736.1 vs. uniprot
Match: A0A6H5JHG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHG5_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.290e-28
Identity = 76/145 (52.41%), Postives = 89/145 (61.38%), Query Frame = 0
Query:   13 RERGFPAT-FCGTPSIYDNKLTAVMGLLAYKDPANSPLGHLVSSLQNQAIADKVNDAILAADASPRRGLEFPSSAL-----TATHI---------------------PPPSSGLELALRHLLATRQASREAAGDSGQGDMRQHLY 130
            R  GFP+T F G PS+YD+KL AVMGLLAY DPA SPLG+LVS LQNQAIADKVNDA+LAADA  RR     +S+      TA+ I                       P+SGLE A+RHLLATRQASRE  G+  Q  +   L+
Sbjct:  946 RRGGFPSTLFGGAPSVYDSKLLAVMGLLAYSDPAASPLGYLVSGLQNQAIADKVNDAVLAADALTRRSNPDRNSSTNQRSRTASSIGGASSNETGNGSGGTAQAAAAAVPTSGLEFAVRHLLATRQASRETLGNGVQAAIHPPLF 1090          
BLAST of mRNA_H-paniculata_contig2834.7736.1 vs. uniprot
Match: D8LQC3_ECTSI (CTLH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC3_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.840e-24
Identity = 69/126 (54.76%), Postives = 79/126 (62.70%), Query Frame = 0
Query:   13 RERGFPAT-FCGTPSIYDNKLTAVMGLLAYKDPANSPLGHLVSSLQNQAIADKVNDAILAADASPRRGLEFPSSAL-----TATHI---------------------PPPSSGLELALRHLLATRQ 111
            R  GFP+T F G PS+YD+KL AVMGLLAY DPA SPLG+LVS LQNQAIADKVNDA+LAADA  RR     +S+      TA+ I                       P+SGLE A+RHLLATRQ
Sbjct:  308 RRGGFPSTLFGGAPSVYDSKLLAVMGLLAYSDPAASPLGYLVSGLQNQAIADKVNDAVLAADALTRRSNPDRNSSTNQRSRTASSIGGASSNETGNGSGGTAQAAAAAVPTSGLEFAVRHLLATRQ 433          
BLAST of mRNA_H-paniculata_contig2834.7736.1 vs. uniprot
Match: A0A803M4Z3_CHEQI (Uncharacterized protein n=5 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803M4Z3_CHEQI)

HSP 1 Score: 53.1 bits (126), Expect = 1.580e-5
Identity = 43/114 (37.72%), Postives = 56/114 (49.12%), Query Frame = 0
Query:    9 DSVKRERGFPATFCGTPSIYDNKLTAVMGLLAYKDPANSPLGHLVSSLQNQAIADKVNDAILAADASPRRGLEFPSSALTATHIPPPSSGLELALRHLLATRQASREAAGDSGQ 122
            D+VK  R   A F G    Y   +   + LLAY++P NSP+GHL+   Q +A+AD VN  IL    S   GL+    +L+  H     S LE  LR L A     R   GD G+
Sbjct:  314 DAVKYGRVELAKFFGQEE-YKELVRECVALLAYEEPLNSPVGHLLKESQREAVADAVNAMIL----STNPGLK---DSLSCLH-----SQLEKLLRQLSACCLERRSLNGDQGE 414          
BLAST of mRNA_H-paniculata_contig2834.7736.1 vs. uniprot
Match: R7QM00_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM00_CHOCR)

HSP 1 Score: 52.4 bits (124), Expect = 2.980e-5
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   28 YDNKLTAVMGLLAYKDPANSPLGHLVSSLQNQAIADKVNDAILAADASPRRGL 80
            Y+  L  V  LLAY+DPA SP+G+L    + + +ADK+N AILA    P R +
Sbjct:  387 YEETLRDVYSLLAYRDPAESPMGYLTKQSRREVVADKLNSAILATQKRPMRSI 439          
BLAST of mRNA_H-paniculata_contig2834.7736.1 vs. uniprot
Match: L1I6B0_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I6B0_GUITC)

HSP 1 Score: 52.0 bits (123), Expect = 3.990e-5
Identity = 40/113 (35.40%), Postives = 54/113 (47.79%), Query Frame = 0
Query:    9 DSVKRERGFPATFCGTPSIYDNKLTAVMGLLAYKDPANSPLGHLVSSLQNQAIADKVNDAILAADASPRRGLEFPSSALTATHIPPPSSGLELALRHLLATRQASREAAGDSG 121
            D  + ++G P T     S   + L  V+GLLAY+DPANSPL HL+SS   + +AD VN AIL  +    R                  S LE+ L+ L+A +   R   G  G
Sbjct:  331 DCPEEKQGRPPT-----SEIVSYLEEVIGLLAYEDPANSPLSHLLSSEHRKKVADVVNTAILEHENVGSR------------------SELEVLLKQLVACQDTLRRMKGSRG 420          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2834.7736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JHG5_9PHAE2.290e-2852.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQC3_ECTSI1.840e-2454.76CTLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A803M4Z3_CHEQI1.580e-537.72Uncharacterized protein n=5 Tax=Chenopodium quinoa... [more]
R7QM00_CHOCR2.980e-545.28Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
L1I6B0_GUITC3.990e-535.40Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2834contigH-paniculata_contig2834:11305..14891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2834.7736.1mRNA_H-paniculata_contig2834.7736.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2834 11194..15707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2834.7736.1 ID=prot_H-paniculata_contig2834.7736.1|Name=mRNA_H-paniculata_contig2834.7736.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp
MSMGPGSTDSVKRERGFPATFCGTPSIYDNKLTAVMGLLAYKDPANSPLG
HLVSSLQNQAIADKVNDAILAADASPRRGLEFPSSALTATHIPPPSSGLE
LALRHLLATRQASREAAGDSGQGDMRQHLYS*
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