prot_H-paniculata_contig2834.7735.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2834.7735.1
Unique Nameprot_H-paniculata_contig2834.7735.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length375
Homology
BLAST of mRNA_H-paniculata_contig2834.7735.1 vs. uniprot
Match: A0A6H5JHG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHG5_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 2.210e-29
Identity = 82/148 (55.41%), Postives = 97/148 (65.54%), Query Frame = 0
Query:  171 EDDHAGERLMR--SLPSEQFAD--IREPLPLR---VKAVPATSLLAEGS----------PRAEMLRATLSLRTQLRRHILGGNMAAATELLQSERPGLLESRADVRFALRCQAFIELVKKGDLVAAVALAQRDLSPFRDSARVRFTSP 301
            ++DH  + +M+  SLP     +  I+ P P R   V  VP T LLA+G            RA  L ATLS RT+LRR IL GN+ AAT +LQ ERPGLLE RADVRFAL+CQ FIELVKKG++ AAV+LAQRDLS FRDS R R  SP
Sbjct:  607 DEDHDIQEMMQHDSLPVPDVINPWIQPPEPPRREPVMPVPVTDLLADGGGGRAAGRGGKSRAVALAATLSFRTRLRREILSGNIRAATAMLQKERPGLLEKRADVRFALKCQEFIELVKKGEVTAAVSLAQRDLSRFRDSPRTRSDSP 754          
BLAST of mRNA_H-paniculata_contig2834.7735.1 vs. uniprot
Match: D8LQC3_ECTSI (CTLH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC3_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 8.160e-29
Identity = 71/110 (64.55%), Postives = 79/110 (71.82%), Query Frame = 0
Query:  202 VPATSLLAEGS----------PRAEMLRATLSLRTQLRRHILGGNMAAATELLQSERPGLLESRADVRFALRCQAFIELVKKGDLVAAVALAQRDLSPFRDSARVRFTSP 301
            VP T LLA+G            RA  L ATLS RT+LRR IL GN+ AAT +LQ ERPGLLE RADVRFAL+CQ FIELVKKG++ AAV+LAQRDLS FRDS R R  SP
Sbjct:    3 VPVTDLLADGGGGGAAGRVGKSRAVALAATLSFRTKLRREILSGNIRAATTMLQRERPGLLEKRADVRFALKCQEFIELVKKGEVTAAVSLAQRDLSRFRDSPRTRSDSP 112          
BLAST of mRNA_H-paniculata_contig2834.7735.1 vs. uniprot
Match: A0A7S2DQ84_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DQ84_9EUKA)

HSP 1 Score: 69.7 bits (169), Expect = 2.610e-9
Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 0
Query:  216 EMLRATLSLRTQLRRHILGGNMAAATELLQSERPGLLESRADVRFALRCQAFIELVKKGDLVAAVALAQRDLSPFRDSA 294
            ++LR TL  R +LRR +L G +AAATEL     PGLL  + ++ F LRCQ FIEL++    + A+A AQR+L+ +R+++
Sbjct:  423 QVLRCTLPHRRELRRLLLAGEVAAATELTAVLYPGLLTKQPELHFRLRCQQFIELIRSSKPMEALAYAQRELAGYRNAS 501          
BLAST of mRNA_H-paniculata_contig2834.7735.1 vs. uniprot
Match: A0A7S1TYD2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYD2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 4.570e-5
Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 0
Query:  211 GSPRAEMLRATLSLRTQLRRHILGGNMAAATELLQSERPGLLESRADVRFALRCQAFIELVKKGDLVAAVALAQRDLSPF 290
            G+P  +     +S R ++R+ ILGG++AA    ++     LLE   D+RFALR Q  ++++ KG + AA+  AQ +L P 
Sbjct:   92 GTPFNDAAADGMSTRVEIRKLILGGDVAAGIRRIEQADARLLEELPDLRFALRRQQLLDIISKGRIDAALTFAQTELLPM 171          
BLAST of mRNA_H-paniculata_contig2834.7735.1 vs. uniprot
Match: A0A7S0I633_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I633_9EUKA)

HSP 1 Score: 54.3 bits (129), Expect = 6.360e-5
Identity = 28/69 (40.58%), Postives = 47/69 (68.12%), Query Frame = 0
Query:  225 RTQLRRHILGGNMAAATELLQSERPGLLESRADVRFALRCQAFIELVKKGDLVAAVALAQRDLSPFRDS 293
            R +LR+ +L G++A A+E  +   P L+E  A++R  L CQ++IELV++G L+ AVA A+  L+  R++
Sbjct:   27 RRRLRQLLLAGDVAGASEECEVHFPKLIERNAELRLLLCCQSYIELVREGKLLEAVAYARDHLAAHREA 95          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2834.7735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JHG5_9PHAE2.210e-2955.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQC3_ECTSI8.160e-2964.55CTLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2DQ84_9EUKA2.610e-945.57Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S1TYD2_9STRA4.570e-536.25Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0I633_9EUKA6.360e-540.58Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006595CTLH, C-terminal LisH motifSMARTSM00668ctlhcoord: 221..278
e-value: 1.1E-7
score: 41.5
IPR006595CTLH, C-terminal LisH motifPROSITEPS50897CTLHcoord: 221..278
score: 10.991
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 225..292
e-value: 6.6E-9
score: 35.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2834contigH-paniculata_contig2834:2488..9998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2834.7735.1mRNA_H-paniculata_contig2834.7735.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2834 2488..9999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2834.7735.1 ID=prot_H-paniculata_contig2834.7735.1|Name=mRNA_H-paniculata_contig2834.7735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=375bp
GGGGAGVGGGAGAMAAVAATAGAFESSAAGDLLRHLHFHLQTRQPGAVMF
GRGDFFVTQEGGERGRREEEDDDDDDEEEENDGGGGGLQVHDDDDEEEEE
QDEEELEGDEDDDDDDDDDDDDDDDDDDDDDEGDEDDPDGDFAEQDEEER
EYDDDDDEDDDQDDGDGGRAEDDHAGERLMRSLPSEQFADIREPLPLRVK
AVPATSLLAEGSPRAEMLRATLSLRTQLRRHILGGNMAAATELLQSERPG
LLESRADVRFALRCQAFIELVKKGDLVAAVALAQRDLSPFRDSARVRFTS
PWGGAGTPGGGLGQQQQQRGLDSSASSASKNGFSPSSASSIFHDTGGGSG
GGGGGSGRSAAASPPSAAGGRASRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006595CTLH_C
IPR024964CTLH/CRA