mRNA_H-paniculata_contig2830.7729.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig2830.7729.1
Unique Name	mRNA_H-paniculata_contig2830.7729.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Match: D7FSD1_ECTSI (DUF4200 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD1_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 1.510e-157
Identity = 257/328 (78.35%), Postives = 282/328 (85.98%), Query Frame = 1

Query:    1 MAMKEKGFFLTQKGKRRG-EADDAIDSDQLEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRMENCDQREAEFEQKQMDMRDQVVRFEKFIQENDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRLKRYQDYLIGTSSSNDAEGDEINDLLNRFRTLRDANSDLMKLCAEHDNSYELRRNEMQQYRQDKQNEILVTNSELNSRQIELEQFRGAMKRAEHKSEQEAERVKGVCRESGQVMLAINNLHTRQGIISPPRKQTLDNFGRCHQTMRTRLPDMNDKQLEKMAFLERCLHCLHAVVERIE 981
            MA KE+G FLTQKGKRRG +A+DA+D+DQLEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRM+NCDQREAEFEQKQ+DMR+QVV+FEKFIQENDAKR RAEAKAKQERRILDQ+A ELRKLEKEL+ AM EEAK+E +R RLKRY+DYL G+SS+ D E DEI+DLLNRF+TLRDAN DLMKLC EHD SYE  R EMQQYRQDKQNE+LVTNS LN +Q+ELEQ RGA+KR EHKSEQE ERV GVCRESGQVMLAI+NLH R                 C QTMR+R+PDMNDKQLEKMAFLERCLHCLH V ERIE
Sbjct:    1 MANKEEGVFLTQKGKRRGGQAEDAVDADQLEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRMDNCDQREAEFEQKQVDMREQVVKFEKFIQENDAKRIRAEAKAKQERRILDQQAAELRKLEKELSSAMAEEAKLEGRRLRLKRYEDYLKGSSSAADPERDEISDLLNRFKTLRDANFDLMKLCEEHDTSYEKGRLEMQQYRQDKQNEVLVTNSSLNEKQMELEQIRGAVKREEHKSEQEGERVMGVCRESGQVMLAISNLHAR-----------------CKQTMRSRIPDMNDKQLEKMAFLERCLHCLHVVGERIE 311

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BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Match: A0A2R5GNW4_9STRA (Coiled-coil domain-containing protein 42 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNW4_9STRA)

HSP 1 Score: 202 bits (514), Expect = 4.360e-58
Identity = 124/245 (50.61%), Postives = 169/245 (68.98%), Query Frame = 1

Query:   82 QLEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRMENCDQREAEFEQKQMDMRDQVVRFEKFIQENDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRLKRYQDYLIGTSSSNDAEGDEINDLLNRFRTLRDANSDLMKLCAEHDNSYELRRNEMQQYRQDKQNEILVTNSELNSRQIELEQFRGAMKRAEHKSEQEAERVKGVCRESGQVMLAINNLHTR 816
            +LE +V GV QTSQSTLLLKK+KEMREVD+AL FMKDE+ TRME CD+R+  FE KQ +MR+QV+RFEKF+QENDAKR RAE KAK E +   Q   ++  L +++    EE AK+E     LKRYQ YL G   +++ E DEI+D+LNR+ TL+ AN DL  L  E +   +  R+++ Q R++ QN++LV NSE+++ Q  LE  R    +A+++ EQ     K + RESGQV+++I NLH R
Sbjct:   43 ELEALVFGVTQTSQSTLLLKKRKEMREVDEALSFMKDEFKTRMEACDERQRNFELKQQEMREQVLRFEKFVQENDAKRTRAEQKAKLEAKTRIQHEAKIHSLSRKVGVMEEERAKLEMDLDHLKRYQIYLDGAVEASEGEYDEISDILNRYSTLKGANKDLTLLVEEGETEMDAIRSQLNQLRRNTQNQLLVNNSEIHANQKTLENMRAVAIKADNEREQSERITKDLQRESGQVIMSIKNLHAR 287

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BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Match: A0A7S2CB55_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CB55_9STRA)

HSP 1 Score: 186 bits (471), Expect = 4.550e-52
Identity = 135/315 (42.86%), Postives = 190/315 (60.32%), Query Frame = 1

Query:   25 FLTQKG--KRRGEADDAIDSDQLEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRMENCDQREAEFEQKQMDMRDQVVRFEKFIQENDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRLKRYQDYLIGT-SSSNDAEGDEINDLLNRFRTLRDANSDLMKLCAEHDNSYELRRNEMQQYRQDKQNEILVTNSELNSRQIELEQFRGAMKRAEHKSEQEAERVKGVCRESGQVMLAINNLHTR--------------QGIISPPRKQTLDNFGRCHQTMRTRLPDMNDKQL 918
            F+TQ+G     G      +  +LE +V+GV Q SQSTLLLKKKKEM EVDD+L+FMK EY TRME CD+R+ EFE++Q +M++QV +FEKFIQEND+KR RAE K KQE++ L  K  E  K + +L  A +   K+     +L++Y++YL  T   S D   +E+ DLLNR+RTL+ AN+ LM+   + +   +  RNE+        N +LV NS+++S Q  +E+ R A K+     E+E E  K   RE+GQV+LAI NL+TR              +G     R Q LD    C +T+  R+ D+ND +L
Sbjct:    3 FITQRGGPPPMGGLSQEAEIGELEALVSGVNQISQSTLLLKKKKEMHEVDDSLDFMKGEYKTRMEACDERQREFERRQSEMKEQVTKFEKFIQENDSKRQRAEVKLKQEKKFLHAKRLEFTKAQTDLDAAEQARTKMIEDLDKLRKYREYLERTVEMSEDNTYEEMWDLLNRYRTLKTANTQLMEQVQQGEAQIDEMRNELYTLNSAHTNHMLVQNSKIHSHQKHVEELRVANKQGADMKEKEEEGKKNESRETGQVILAIRNLYTRCLNTMHTRVAAVGMEGDNPADRLQMLD---LCLKTICERIVDLNDIEL 314

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BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Match: A0A067CRW9_SAPPC (DUF4200 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRW9_SAPPC)

HSP 1 Score: 172 bits (435), Expect = 6.380e-47
Identity = 128/318 (40.25%), Postives = 190/318 (59.75%), Query Frame = 1

Query:   25 FLTQKGKRRGEADDAIDSDQLEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRMENCDQREAEFEQKQMDMRDQVVRFEKFIQENDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRLKRYQDYLIGTSSSNDAEGDEINDLLNRFRTLRDANSDLMKLCAEHDNSYELRRNEMQQYRQDKQNEILVTNSELNSRQIELEQFRGAMKRAEHKSEQEAERVKGVCRESGQVMLAINNLHTRQGIISPPRKQTLDNFGRCHQTMRTRLPDMNDKQLEKMAFLERCLHCLHAVVERI 978
            FLT+  K RG      +  +LE +V+GV+  SQSTLLLKK+KE+REV+DALEFMK+EY  R+E+C +R+ EFE+KQ DMRDQV +FEKFI+END+KR RAE KAK E R  +Q      + EK+++Q    EA +E +R +L +Y+ YL     +++ E +EI D+LNR+ TL DAN DL       ++  +  R E++ ++ + +N ILV NSE++  Q  LE+ RG   + +    ++        RESGQ++LAI NL                 + RC  +M  ++P + D+  + M ++    + L  V ERI
Sbjct:   17 FLTET-KLRGHDFPTKELSELEPLVSGVSLMSQSTLLLKKRKELREVNDALEFMKEEYAQRVESCAERQREFERKQQDMRDQVSKFEKFIKENDSKRTRAELKAKTEHRSSEQ-----NEYEKDVSQR---EA-LEKKRDQLLKYRTYLDSAVEASEQEYEEIADILNRYATLVDANKDLQVQVQSAESQIDRLRQELRTFKTEMENNILVQNSEIHGHQQHLERIRGETFQLDLDRGRDDRTYNDRSRESGQIILAIKNL-----------------YNRCRTSMGGKIPPVTDQSSDTMVYMT---NILKVVAERI 304

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BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Match: A0A835Z0W5_9STRA (DUF4200 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0W5_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.560e-46
Identity = 131/302 (43.38%), Postives = 165/302 (54.64%), Query Frame = 1

Query:  205 RMENCDQREAEFEQKQMDMRDQVVRFEKFIQENDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRLKRYQDYLIGTSSSNDAEGDEINDLLNRFRTLRDANSDLMKL-----------------------------------------------------CAEHDNSYELRRNEMQQYRQDKQNEILVTNSELNSRQIELEQFRGAMKRAEHKSEQEAERVKGVCRESGQVMLAINNLHTRQGIISPPRKQTLDNFGRCHQTMRTRLPDMNDKQLE-KMAFLERCL 948
            RME CD R+ EFE KQ++M++QV RFEKFIQENDAKRARAEAKAKQERR L+Q+  EL++L +EL+ A+ EEA ++ +R RL+RYQ YL    ++++   DEI DLLNRF TLR AN+DL                                                        CA  +   E RR E    RQD QN +LV NS LN RQ ELE  R  +K A  KSE EAERVKG+ RE GQ++ A+ NL+TR                 C QTMR  LPD  D++ + ++A L R L
Sbjct:  162 RMERCDLRQREFEAKQLEMKEQVQRFEKFIQENDAKRARAEAKAKQERRALEQREAELKRLSEELSSALSEEAALKDRRLRLRRYQAYLGAAVAASEQGFDEIGDLLNRFGTLRGANTDLSAQLPQGHLTLSRGANQTPAACAPIYTVARPSAPHHSEHCCRFGTLRGANTDLGARCARGEGEMERRRAEALALRQDAQNALLVHNSALNERQRELEGAREGVKHAMEKSESEAERVKGIAREGGQLVAAVRNLYTR-----------------CKQTMRNPLPDAADRREDDRLAQLARYL 446

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BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Match: A0A1W0A7X7_9STRA (DUF4200 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7X7_9STRA)

HSP 1 Score: 170 bits (431), Expect = 2.870e-46
Identity = 116/298 (38.93%), Postives = 182/298 (61.07%), Query Frame = 1

Query:   85 LEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRMENCDQREAEFEQKQMDMRDQVVRFEKFIQENDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRLKRYQDYLIGTSSSNDAEGDEINDLLNRFRTLRDANSDLMKLCAEHDNSYELRRNEMQQYRQDKQNEILVTNSELNSRQIELEQFRGAMKRAEHKSEQEAERVKGVCRESGQVMLAINNLHTRQGIISPPRKQTLDNFGRCHQTMRTRLPDMNDKQLEKMAFLERCLHCLHAVVERI 978
            LE +V+GV+  SQSTLLLKK+KE+RE++DAL+FMK+EY  R++NC +R+ EFE+KQ +MRDQV +FEKFI+END+KR RAE KAK E R  +Q     ++L  +  + + +   +E +R +L +Y+ YL  T  +++ E +EI D+LNR+ TL DAN+DL       ++  +  R E++ ++ + +N ILV NSE++  Q  LE+ RG   + +    ++        RESGQ++LAI NL                 + RC  +M  ++P + D+ ++ M ++    + L  V ERI
Sbjct:   34 LEPLVSGVSLMSQSTLLLKKRKELREINDALDFMKEEYAQRVDNCAERQREFERKQQEMRDQVSKFEKFIKENDSKRTRAEIKAKTEHRSAEQNEVRKKQLVVQYEKDVGQRESLEKKRDQLLKYRTYLDSTVEASEQEYEEIADILNRYATLVDANNDLRVQVQSAESQIDRLRQELRTFKTEMENNILVQNSEIHGHQQYLEKLRGEAFQLDLDRGRDDRIYNDRSRESGQIVLAIKNL-----------------YNRCRTSMGGKIPPVTDQSVDTMVYMT---NILKVVAERI 311

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BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Match: A0A1V9ZRX9_9STRA (SET domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRX9_9STRA)

HSP 1 Score: 176 bits (445), Expect = 9.260e-46
Identity = 123/318 (38.68%), Postives = 191/318 (60.06%), Query Frame = 1

Query:   25 FLTQKGKRRGEADDAIDSDQLEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRMENCDQREAEFEQKQMDMRDQVVRFEKFIQENDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRLKRYQDYLIGTSSSNDAEGDEINDLLNRFRTLRDANSDLMKLCAEHDNSYELRRNEMQQYRQDKQNEILVTNSELNSRQIELEQFRGAMKRAEHKSEQEAERVKGVCRESGQVMLAINNLHTRQGIISPPRKQTLDNFGRCHQTMRTRLPDMNDKQLEKMAFLERCLHCLHAVVERI 978
            FLT+  K RG      +  +LE +V+GV+  SQSTLLLKK+KE+REV+DALEFMK+EY  R+ENC +R+ EFE+KQ +MRDQV +FEKFI+END+KR RAE KAK E R  +Q     ++L  +  + + +  ++E +R +L +Y+ YL     +++ E +EI D+LNR+ TL DAN+DL       ++  +  R +++ ++ + +N ILV NSE++  Q  LE+ RG   + +    ++        RESGQ++LAI NL                 + RC  +M  ++P + D+ ++ M ++    + L  V ERI
Sbjct:  352 FLTE-AKLRGHEFPTKELAELEPLVSGVSLMSQSTLLLKKRKELREVNDALEFMKEEYAQRVENCAERQREFERKQQEMRDQVSKFEKFIKENDSKRTRAELKAKTEHRSAEQNEVRKKQLVAQYEKDLGQREQLEKKRDQLLKYRTYLDSAVEASEQEYEEIADILNRYATLVDANNDLKVQVQSAESQIDRLRQDLRTFKTEMENNILVQNSEIHGHQQHLEKIRGETFQLDLDRGRDDRTYNDRSRESGQIVLAIKNL-----------------YNRCRTSMGGKIPPVTDQSVDAMVYMS---NILKVVAERI 648

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BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Match: A0A024TGM8_9STRA (DUF4200 domain-containing protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TGM8_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.770e-43
Identity = 110/258 (42.64%), Postives = 168/258 (65.12%), Query Frame = 1

Query:   85 LEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRMENCDQREAEFEQKQMDMRDQVVRFEKFIQENDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRLKRYQDYLIGTSSSNDAEGDEINDLLNRFRTLRDANSDLMKLCAEHDNSYELRRNEMQQYRQDKQNEILVTNSELNSRQIELEQFRGAMKRAEHKSEQEAERVKGVCRESGQVMLAINNLHTR---QGIISPPRKQT 849
            +E +V+GV+  SQSTLLLKK+KE+RE++DAL+FMK+EY  R+E C +R+ EFE+KQ +MR+QV +FEKFI+END+KR RAE KAK E R  +Q     ++L  +L + +     +E +R +L +Y+ YL     +++ E +EI D+LNR+ TL DAN+DL       ++  +  R +++ ++ + +N ILV NSE++  Q  LE+ RG   + +    ++     G  RESGQ++LAI NL+ R    G I PP K+T
Sbjct:   31 VEPIVSGVSLMSQSTLLLKKRKELREINDALDFMKEEYAQRVETCAERQREFERKQDEMREQVAKFEKFIKENDSKRTRAELKAKTEHRSAEQNDVRKKQLVLQLDKDVATRESLEKRRDQLLKYRTYLDSAVDASEQEYEEIADILNRYATLLDANNDLKAQVQSAESQIDKLRQDLRTFKTEMENTILVQNSEIHGHQQHLEKIRGETFQLDLDRGRDDRVSNGRSRESGQIVLAIKNLYNRCRTSGKI-PPVKET 287

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BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Match: A0A812QU29_SYMMI (FAP73 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QU29_SYMMI)

HSP 1 Score: 158 bits (400), Expect = 1.850e-43
Identity = 97/183 (53.01%), Postives = 130/183 (71.04%), Query Frame = 1

Query:   19 GFFLTQKGKRRGEADDAIDSDQLEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRMENCDQREAEFEQKQMDMRDQVVRFEKFIQENDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRLKRYQDYLIGTSSSNDAEGDEINDLLNRFRTLRDANSDLM 567
            GFFLTQKG+R  E    I   +LE ++AG  QTSQSTLLLKK+KEMREVD+ALE MK+EY  RME C++R  +FE KQ  MR+QV++FEKFIQENDAKR RAEAKAK ER+I DQK QE+  L +++ +   ++  +E + ++   Y+ YL     + D   +E+ D+L+R+ TL+ AN DLM
Sbjct:   13 GFFLTQKGERINEVKREI--AELEALLAGATQTSQSTLLLKKRKEMREVDEALELMKEEYKNRMEACEERRMQFELKQAKMREQVLKFEKFIQENDAKRQRAEAKAKLERKIYDQKCQEMNMLLQKIEEMERDQKDLEKELQKKACYRAYLEQFLDAGDVSYEEVTDILSRYDTLKGANRDLM 193

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BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Match: A0A485K4I0_9STRA (Aste57867_1153 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K4I0_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.930e-43
Identity = 113/276 (40.94%), Postives = 175/276 (63.41%), Query Frame = 1

Query:   25 FLTQKGKRRGEADDAIDSDQLEEMVAGVAQTSQSTLLLKKKKEMREVDDALEFMKDEYNTRMENCDQREAEFEQKQMDMRDQVVRFEKFIQENDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRLKRYQDYLIGTSSSNDAEGDEINDLLNRFRTLRDANSDLMKLCAEHDNSYELRRNEMQQYRQDKQNEILVTNSELNSRQIELEQFRGAMKRAEHKSEQEAERVKGVCRESGQVMLAINNLHTR---QGIISPPRK 843
            FLT+    RG      +  ++E +V+GV+  SQSTLLLKK+KE+RE++DALEFMK+EY  R+ENC +R+ EFE+KQ +MR+QV +FEKFI+END+KR RAE KAK E R  +Q     ++L  +L + +     +E +R +L +Y+ YL     +++ E +EI D+LNR+ TL DAN+DL       ++  +  R +++ ++ + +N ILV NSE++  Q +LE+ RG   + +    ++        RESGQ++LAI NL+ R    G I P ++
Sbjct:  137 FLTETKVVRGHDYPTKELAEIEPLVSGVSLMSQSTLLLKKRKELREINDALEFMKEEYAQRVENCAERQREFERKQEEMREQVSKFEKFIKENDSKRTRAELKAKAEHRSAEQNDVRKKQLVAQLEKDVASRDSLEKRRAQLLKYRTYLESAVEASEQEYEEIADILNRYATLVDANNDLKVQVQSAESQIDRLRQDLRTFKTEMENTILVQNSEIHGHQQQLEKIRGETFQLDLDXGKDDRISNDRSRESGQIVLAIKNLYNRCRMSGKIPPVKE 412

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2830.7729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FSD1_ECTSI	1.510e-157	78.35	DUF4200 domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A2R5GNW4_9STRA	4.360e-58	50.61	Coiled-coil domain-containing protein 42 n=1 Tax=H...	[more]
A0A7S2CB55_9STRA	4.550e-52	42.86	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A067CRW9_SAPPC	6.380e-47	40.25	DUF4200 domain-containing protein n=2 Tax=Saproleg...	[more]
A0A835Z0W5_9STRA	1.560e-46	43.38	DUF4200 domain-containing protein n=1 Tax=Tribonem...	[more]
A0A1W0A7X7_9STRA	2.870e-46	38.93	DUF4200 domain-containing protein n=1 Tax=Thrausto...	[more]
A0A1V9ZRX9_9STRA	9.260e-46	38.68	SET domain-containing protein n=1 Tax=Achlya hypog...	[more]
A0A024TGM8_9STRA	1.770e-43	42.64	DUF4200 domain-containing protein n=6 Tax=Aphanomy...	[more]
A0A812QU29_SYMMI	1.850e-43	53.01	FAP73 protein n=1 Tax=Symbiodinium microadriaticum...	[more]
A0A485K4I0_9STRA	2.930e-43	40.94	Aste57867_1153 protein n=1 Tax=Aphanomyces stellat...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2830	contig	H-paniculata_contig2830:9779..15694 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	460.7
Seed ortholog evalue	6.4e-127
Seed eggNOG ortholog	2880.D7FSD1
Hectar predicted targeting category	other localisation
EggNOG free text desc.	Domain of unknown function (DUF4200)
EggNOG OGs	28JHQ@1,2QRWX@2759
Ec32 ortholog description	Domain of unknown function DUF4200
Ec32 ortholog	Ec-20_005060.1
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	9
Model size	1098
Cds size	1098
Stop	1
Start	1

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2830.7729.1	prot_H-paniculata_contig2830.7729.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig2830 9779..15694 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig2830:9779..15694-
coding sequence from alignment at H-paniculata_contig2830:9779..15694-

protein sequence of mRNA_H-paniculata_contig2830.7729.1

>prot_H-paniculata_contig2830.7729.1 ID=prot_H-paniculata_contig2830.7729.1|Name=mRNA_H-paniculata_contig2830.7729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=366bp
MAMKEKGFFLTQKGKRRGEADDAIDSDQLEEMVAGVAQTSQSTLLLKKKK
EMREVDDALEFMKDEYNTRMENCDQREAEFEQKQMDMRDQVVRFEKFIQE
NDAKRARAEAKAKQERRILDQKAQELRKLEKELAQAMEEEAKVEAQRRRL
KRYQDYLIGTSSSNDAEGDEINDLLNRFRTLRDANSDLMKLCAEHDNSYE
LRRNEMQQYRQDKQNEILVTNSELNSRQIELEQFRGAMKRAEHKSEQEAE
RVKGVCRESGQVMLAINNLHTRQGIISPPRKQTLDNFGRCHQTMRTRLPD
MNDKQLEKMAFLERCLHCLHAVVERIEVMIMQTIIMGHILTIHSFLSNNN
NDNGNNHNRSRPGFK*

mRNA from alignment at H-paniculata_contig2830:9779..15694-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig2830.7729.1 ID=mRNA_H-paniculata_contig2830.7729.1|Name=mRNA_H-paniculata_contig2830.7729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5916bp|location=Sequence derived from alignment at H-paniculata_contig2830:9779..15694- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGATGAAAGAGAAGGGCTTCTTTCTGACACAAAAGGGCAAGCGCCG
TGGCGAGGCGGACGATGCAATCGACTCGGATCAGCTTGAGGAAATGGTGG
CTGGCGTCGCGCAGACCAGCCAGTCTACCTTGCTCCTCAAGAAGAAGAAG
GAGATGCGCGAGGTGCGCTGTAGTTTACCATCTATATCCATTGCAACCTG
TTCTTGTACTGCTTATTTTAATTGACTGACTGCTGAACGCTTGGACAGAA
TCGCAACAGTAGCTGTGAACACACGTTGCTCTGATGCACCCTCACCAGCT
CATGGACTAAGATACGGACGGAGACGCAAGATGCCGTAAGCGAATCCGTT
GAGGATTAAAGGTTGACAGTGATCACGGACGACGTTTTTTCACGTATCCC
CGAAGTGACTTTCGCTGCCTACCGCGTTGCACGAACAGAGAGAAAGATAG
ACAGAGATATAACTATAATTAACATCTGTAAATATCTGGTTTTGGAAGTA
ACACACGACCCGTCCATGGTTCGAATGACAAGAGGTTGTTACATGCCACC
GCGAGCGTACAAGTACATCAGCGGTAAATATCTGAAAGAGTGGTTCTTAC
CTACTGTAGACAGAGAAAATTCTTACTTCGACACGGCAACAATAAGTATT
TTAGGCGGTGCAGAAAACTATGTAGGCCAAGGAAGAAATAACTTGTGAGT
ATTTTCACAGCAGCCAACTCATACCCTAGAGCTAGGGCTCCAGGCCAGCA
GCTTCCCTACCAGCTGTTTTATGAGCACACCACTGTATTTCCAAGTTGAG
GTCGTATGCACCAAGACAAGGAGCATATTAATAGAACAACAGGCATTTAT
GTATCTTATATCTGGTGGGGTATCATTGCTGGTTAGTTCTACGGTATAGA
CGTCGTGCGTCAGGGGTTGCGGTGCTTGAGTACGCATAACAGTCAGGAAA
CCCACAGTCAATATTACTGGAGCTAAAGTACTCCCATCTCACCGTATCAT
ACGAGGTACCATCTTCCTATCCCTGCCATGCTCTCAAAGTATCCGATGTC
ACCAACCCCCTTTCTTTCGAGGCGAAAGGTTGGGTTGGGTGACGATATGC
AATGGTAGCGAATTCTATAAGCGACGATACTTCGTAGCAAAATCCGGTAG
GTGACTGGCTAGATAATTAAACATTAGTAGCCCGCCTGTATTTTGTCGGG
AGGGTCTCCGGGGACATGTTCATCTCATCACCATCTCCTTAAAGGGCGTC
ACCAATTGTTGTTGACCTCGTAGCCCTGGGACTTAAACGAGACTAAAAAG
ACCTGCCCAGTGATGTCCTATATTTTGCGCGCATGTATTTGGCAACATTT
CTCAAGTTTTCAAGTGCTCAAACCCATACTGCAGGTCGACGATGCCCTTG
AGTTCATGAAAGACGAATACAACACGCGAATGGAAAACTGTGATCAGCGC
GAGGTGACTATAAACATAAGTCATTTCGTTTTCTTTTCGACAATGTTTTG
AGGGATCAAGAGGCTTAATCACTTCGCTAGAATATATCGATGTAGTTCAA
GAGTTTTACCCAGGCAGACTGTCGTAGGAGACGAAGGATCGAGAGCAATA
GACTGTGTCTCTGACAACTAATGATCTTTGTAGTAGTCTTCAGGAGAAAG
GTGAGCTTCCTCGAAATACATAACCATCGTCGAGTCAATTTCCTGTCCGA
GGTTTTCAGCCCCTATCTTGCATGGCTGACCACGACATCCACAGTGGTGT
AACACAAACATTCTCAACCTTTCAACCTTTCAGCGCCTTGTCATGGACTG
CATACGTAGAAAGGGCGAAAGCTTAATGGTATCATCGCCCAGATGATTCC
GTTCGCATACCCGACTGACTTGACTTTCGCCTACAGCTTCAGGGGCAACG
GGCTATTTGTTAAATCTAACTAGCACCACAGTTTCTAGTGTTGAAGGGGC
TGCCACTTGTGCCAAATCGTTTTATTTTTGTTACTGTACCACAGGCCGAG
TTCGAGCAAAAGCAGATGGATATGCGAGATCAGGTGGTCAGATTTGAGAA
ATTTATTCAGGAAAATGACGCAAAGCGGGCACGGGCAGAGGCTAAAGCGA
AGCAAGTGAGATTCCGCGAACAAACGCTCTGTCCATACTGCACTCCTCCT
GGTGAAACAAAGAAGAGAATAGCACATAAGCAACACACTGAACTCGTGCC
CACACTCTGCTCATTGGGGCTCTTGACTGCCTACGGTGTTTGAAGTAGGC
AAAACGCCCCAACAATATGGGACCCCCTGCCCCCCAATGCCGTCGCCTCC
TCCATTCATGTTTTTGGAAACACGACGATGCGAACTACGGAGAATCTTGT
GGGCAACAGGGAGGGGGGAAGATATGTAGTTTTAGTTTTGAAACTCCTGG
AGGGGAGGGAGTATTCTCGATCCCTCTGCGTCACGCTGAAGAATGATTTG
TTTGGTCCCACTGTTGTCGATTTTCATTGATAATGGACTAACCAAGGAGA
TGTGCACGAGCAGAATGGTGCATACTTAGCACAGTGGGAAATTATGCTAG
AGTCGTCCGATCTGTACTATACTGTCATATCGTGAAAAATATATTTTATT
CGGTAGGCACTTATCCGGTAAAATACTTGTAACATATGACGAAAAGCGTC
GTGTTTACGACCAACCTCAGAATTCAAGCTCACAGTGAACAGCTGAACAT
TTTTTTGCACCTTCCTGAATACCGACACAACACGATTGTAACAGAGACAT
GAAAGAAAGTGATTCAAAAGTGAATTTCGTACGTTTTCTGTGTCGATATT
TCCTGCCTCGGACGGGCGCGTTGTATGACAATGTAGGAACGACGCATCTT
GGATCAAAAGGCGCAGGAATTAAGAAAGCTAGAGAAGGAGTTAGCGCAAG
CTATGGAAGAGGTACGTTTTCCTTTCCGGTGGGTAATCAAGCTGTGTAGA
TGGTACCATTGATGAAACGATCTGGTAGGGACTATACCAAAATTGTAACG
GCAGGCTGTGGACTGGAATTGCTACAAGGCTCAGAGGTGTTCATCAGGCA
TATCAAACACGTCAGTATGTTTTACGGCGGTTTCGGGAATTTTTGTGCCG
CTTCGAAGGCATGGTGCGTTGTATCGTCACATGGAAAACAGAGGATGGGC
AAGGAAACAAATTCAGCAAGTACCTGTAGTTGACCGAGCTCTATTTTGTT
TAAACGTTTATTATCCAAATACTCAGGAAGCTAAAGTGGAAGCGCAGCGA
CGAAGATTGAAGCGCTATCAAGACTACCTTATTGGCACCAGCTCTTCGAA
CGATGCGGAGGGAGATGAAATCAACGACCTGCTGAATCGGTGAGATGCCT
CCACACGGACGAACCATCGGAAGGAATGTCAAGTCACGGATACACCAGAT
CACGACTAGGAACAGTCGAAAACATTGATTGTATCGCGTTCGAACCAACC
GTGTAAAGTATCCACGGGGGAGAAAAGGGCAAATCATCGTTTGTGTGCTG
CCAATATTTTCTTCAACCGTTACGGTGATACCGACTTATCCGTAAAACCC
GAGTAATTAGTGCGGGTATCACACGCTATCCCGAAGGGTGTTAAGTTCAA
TTTGTTCAAAAAGCCCCTTCGTTTATTAGCGTCCTCGTCTGTATTTTCCC
CCGAGAGGTGTATGTCACTATTGGCACATGCAGTCGGGAGAAAGGACGGC
AAACGGACCGTTTTGGAAATCGCCTCTAGGTTTAACTAGGTACTTCTTGC
TAAATCGATTGGGGTATGTATCCTTAGCATAAGTGAGGGCGAAAGGTACC
CGTGCCTATTTGGGGCTTCCATCCTACGCAAAGTTCCTGACTGAAACTGG
ATTGATGCATCGACCACAACATAACTTCAACTGCCCTACCCAGGCCGAAG
TCAAGCCGCGACATGATCCATTCTCGGCTGCATGAAAGCACCGGTTTGTT
GTTCATGTTTGGTACGTCGATTTTTATTCGGCATGATTAACCCAACATGT
TTGCTAACCCTAACCCAAGGTTCCGAACGCTACGGGACGCGAACTCTGAT
CTGATGAAGCTGTGCGCGGAGCATGATAATTCTTACGAGCTGCGCCGAAA
CGAGATGCAGCAGTATAGGTACGCCAAGTACAAATGAGTTCGTATGTTCC
GTTTTCACATACTGTTTTTCAGTCTTGCATACCGATAAGCGATTCGCAGA
TCTAGATGCTGGTAGTAGTGAACTAGAACATTGTTTTTGGGGCGGGGGTC
CCGCTGCCACAACTGCAGTACACTAGTATCTAGATACCATACCTGGAATA
GTTTATTATAGTTTGCTGGGGGATCTCTGAGCTCTAGCACCACGTTCCCC
TCAAGAGTTTGAGATATGTTCATCAATTGGTTTATCCTGGACTTAGACAC
ACGCCATTCTGAAGCACTTGCCAGCTACTACTGTTGTACCCCAACAATCT
TCCCCGAACACAACAGTAAAACCTAGCATCTATGCTGACTGGGGACGTCG
ACGGAGACAACAATAAATAGCCTGCTGGTCACCTCCACCCTGCCCCGTAT
TCTGTTAAATTCGATCACAACCGCGGAAAATTTGTTCAATCTTAGCGCTA
TTTGTTTTGCTCATCAGGCAAGACAAGCAAAACGAGATTTTAGTGACAAA
CTCCGAGCTAAACTCGAGGCAAATCGAACTGGAGCAGTTCCGAGGGGCGA
TGAAGAGAGCCGAACACAAGAGCGAGCAGGAAGCAGAGAGAGTCAAGGGG
GTGTGCCGAGAATCGGGACAAGTGATGCTAGCCATCAACAATCTGCACAC
CAGGCAGGGCATAATATCCCCTCCTCGAAAACAAACACTTGATAACTTTG
GACGTTGTCACGTGAGATGGTTTCCGAGGGAGGGTGGTACTTTGGTAAGC
ATGTCGCCGTCTTCCGATTACAATAGCACTTCCTGGGTGAATGTAATATC
TTCTGAGCCATCAACGCCAAATAAAATCAGAAATCTTGAAAGAGTTACCA
GCCTCCAAGTATTCAAGTGTAGAATCGCAGAGAACCGAGATCTGGGGTCT
ACGGGTCGGAACCAACTCGTGTGGATTACCGCCTACACGATGACAAAATG
AAACAACGGATTAAAGACCGGATTTTCAAAATTCGTTGGTCGTGTCTCTC
TCCTATCACCTGTTCTCGTTAAATCCTTGTTCCTTTCTACTCTGCAAGGT
AATTGCGGGCATTTGGTCTTTGTCGCCTTGACTTGAACATCAATCGCCGT
GATGTCTGTTTGTGCAACAACGGCGGTCGGTGACGGCGAATATTCAAGAA
CAGGTGCAAGCAAACGATGCGGACGAGATTGCCGGACATGAACGACAAGC
AACTGGAGAAAATGGCGTTCCTGGAACGGTGCTTGCATTGCTTGCACGCT
GTGGTGGAGCGAATAGAGGTGATGATCATGCAAACAATTATTATGGGTCA
TATTCTGACAATACATGTAAATATGATGAGCATAGAACCTCGTGCTCTGG
CAAGAGTTGAACCTACCCTACATTGAGCTTCGGAATGTTCCCTACAGAAG
AGCTGGATCCATCTGTGGTCCATGTACGACACCATACGACACCAGGGCTA
CTCCCACCCCCGGTTTAGGTCTATGGCTTACCTAGGGAGCTCCGAAGTAC
AACGAATTATGACAGATGCCATCAACAACTGCTGAATGATGCCGTATACT
CATACATAGACACACACTTTGAGCATTGTTGATCTTGTGCAACTATAATT
TTACGATATATCAAATGAACACGATTGATTGCCGTCACCACTCGCCGATG
CAGACAAAAACAAACTGAATCGACGTGCCACCTAGCTAACCTTCAAGTCT
TTCCTATCGAACAACAACAACGACAACGGCAATAACCATAATCGATCACG
GCCAGGATTTAAGTGA

Coding sequence (CDS) from alignment at H-paniculata_contig2830:9779..15694-

>mRNA_H-paniculata_contig2830.7729.1 ID=mRNA_H-paniculata_contig2830.7729.1|Name=mRNA_H-paniculata_contig2830.7729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2196bp|location=Sequence derived from alignment at H-paniculata_contig2830:9779..15694- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGATGAAAGAGAAGGGCTTCTTTCTGACACAAAAGGGCAAGCGCCG
TGGCGAGGCGGACGATGCAATCGACTCGGATCAGCTTGAGGAAATGGTGG
CTGGCGTCGCGCAGACCAGCCAGTCTACCTTGCTCCTCAAGAAGAAGAAG
GAGATGCGCGAGATGGCGATGAAAGAGAAGGGCTTCTTTCTGACACAAAA
GGGCAAGCGCCGTGGCGAGGCGGACGATGCAATCGACTCGGATCAGCTTG
AGGAAATGGTGGCTGGCGTCGCGCAGACCAGCCAGTCTACCTTGCTCCTC
AAGAAGAAGAAGGAGATGCGCGAGGTCGACGATGCCCTTGAGTTCATGAA
AGACGAATACAACACGCGAATGGAAAACTGTGATCAGCGCGAGGTCGACG
ATGCCCTTGAGTTCATGAAAGACGAATACAACACGCGAATGGAAAACTGT
GATCAGCGCGAGGCCGAGTTCGAGCAAAAGCAGATGGATATGCGAGATCA
GGTGGTCAGATTTGAGAAATTTATTCAGGAAAATGACGCAAAGCGGGCAC
GGGCAGAGGCTAAAGCGAAGCAAGCCGAGTTCGAGCAAAAGCAGATGGAT
ATGCGAGATCAGGTGGTCAGATTTGAGAAATTTATTCAGGAAAATGACGC
AAAGCGGGCACGGGCAGAGGCTAAAGCGAAGCAAGAACGACGCATCTTGG
ATCAAAAGGCGCAGGAATTAAGAAAGCTAGAGAAGGAGTTAGCGCAAGCT
ATGGAAGAGGAACGACGCATCTTGGATCAAAAGGCGCAGGAATTAAGAAA
GCTAGAGAAGGAGTTAGCGCAAGCTATGGAAGAGGAAGCTAAAGTGGAAG
CGCAGCGACGAAGATTGAAGCGCTATCAAGACTACCTTATTGGCACCAGC
TCTTCGAACGATGCGGAGGGAGATGAAATCAACGACCTGCTGAATCGGAA
GCTAAAGTGGAAGCGCAGCGACGAAGATTGAAGCGCTATCAAGACTACCT
TATTGGCACCAGCTCTTCGAACGATGCGGAGGGAGATGAAATCAACGACC
TGCTGAATCGGTTCCGAACGCTACGGGACGCGAACTCTGATCTGATGAAG
CTGTGCGCGGAGCATGATAATTCTTACGAGCTGCGCCGAAACGAGATGCA
GCAGTATAGGTTCCGAACGCTACGGGACGCGAACTCTGATCTGATGAAGC
TGTGCGCGGAGCATGATAATTCTTACGAGCTGCGCCGAAACGAGATGCAG
CAGTATAGGCAAGACAAGCAAAACGAGATTTTAGTGACAAACTCCGAGCT
AAACTCGAGGCAAATCGAACTGGAGCAGTTCCGAGGGGCGATGAAGAGAG
CCGAACACAAGAGCGAGCAGGAAGCAGAGAGAGTCAAGGGGGTGTGCCGA
GAATCGGGACAAGTGATGCTAGCCATCAACAATCTGCACACCAGGCAGGG
CATAATATCCCCTCCTCGAAAACAAACACTTGATAACTTTGGACGTTGTC
ACGCAAGACAAGCAAAACGAGATTTTAGTGACAAACTCCGAGCTAAACTC
GAGGCAAATCGAACTGGAGCAGTTCCGAGGGGCGATGAAGAGAGCCGAAC
ACAAGAGCGAGCAGGAAGCAGAGAGAGTCAAGGGGGTGTGCCGAGAATCG
GGACAAGTGATGCTAGCCATCAACAATCTGCACACCAGGCAGGGCATAAT
ATCCCCTCCTCGAAAACAAACACTTGATAACTTTGGACGTTGTCACCAAA
CGATGCGGACGAGATTGCCGGACATGAACGACAAGCAACTGGAGAAAATG
GCGTTCCTGGAACGGTGCTTGCATTGCTTGCACGCTGTGGTGGAGCGAAT
AGAGGTGATGATCATGCAAACAATTATTATGGGTCATATTCTGACAATAC
ATCAAACGATGCGGACGAGATTGCCGGACATGAACGACAAGCAACTGGAG
AAAATGGCGTTCCTGGAACGGTGCTTGCATTGCTTGCACGCTGTGGTGGA
GCGAATAGAGGTGATGATCATGCAAACAATTATTATGGGTCATATTCTGA
CAATACATTCTTTCCTATCGAACAACAACAACGACAACGGCAATAACCAT
AATCGATCACGGCCAGGATTTAAGTGATCTTTCCTATCGAACAACAACAA
CGACAACGGCAATAACCATAATCGATCACGGCCAGGATTTAAGTGA