prot_H-paniculata_contig28284.7722.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig28284.7722.1
Unique Nameprot_H-paniculata_contig28284.7722.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length69
Homology
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BLAST of mRNA_H-paniculata_contig28284.7722.1 vs. uniprot
Match: D7G1B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B0_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 6.440e-22
Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 0 
Query:    1 LSEQLDFTYTISAPPDGTGTSETIEMVRNGTKDLAGSWITITEERCNYVSFTYPYYDVGIALVYKTVND 69
            L++ + FTY++ APP+GT T ETIEMVRNG+ D+ GSWITIT ER  YVSFTYPY+D+GIA VY    D
Sbjct:  400 LADVVGFTYSLRAPPEGTTTPETIEMVRNGSADMTGSWITITSERAEYVSFTYPYFDLGIAFVYLPTID 468
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BLAST of mRNA_H-paniculata_contig28284.7722.1 vs. uniprot
Match: A0A6H5JES6_9PHAE (PBPe domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES6_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.360e-21
Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 0 
Query:    1 LSEQLDFTYTISAPPDGTGTSETIEMVRNGTKDLAGSWITITEERCNYVSFTYPYYDVGIALVYKTVND 69
            L++ + FTY++ APP+GT T +TIEMVRNG+ D+ GSWITIT ER  YVSFTYPY+D+GIA VY    D
Sbjct:  182 LADVVGFTYSLRAPPEGTTTPDTIEMVRNGSADMTGSWITITSERAEYVSFTYPYFDLGIAFVYLPTID 250
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28284.7722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1B0_ECTSI6.440e-2263.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JES6_9PHAE1.360e-2162.32PBPe domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001638Solute-binding protein family 3/N-terminal domain of MltFPFAMPF00497SBP_bac_3coord: 18..66
e-value: 6.1E-10
score: 38.9
NoneNo IPR availableGENE3D3.40.190.10coord: 1..69
e-value: 1.2E-13
score: 53.0
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 2..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig28284contigH-paniculata_contig28284:176..382 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig28284.7722.1mRNA_H-paniculata_contig28284.7722.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig28284 176..382 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig28284.7722.1 ID=prot_H-paniculata_contig28284.7722.1|Name=mRNA_H-paniculata_contig28284.7722.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
LSEQLDFTYTISAPPDGTGTSETIEMVRNGTKDLAGSWITITEERCNYVS
FTYPYYDVGIALVYKTVND
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001638Solute-binding_3/MltF_N