mRNA_H-paniculata_contig2826.7720.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Match: D7G7A3_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A3_ECTSI) HSP 1 Score: 297 bits (761), Expect = 3.530e-83 Identity = 161/387 (41.60%), Postives = 224/387 (57.88%), Query Frame = 3
Query: 258 GLDGSVVLAGYTGGDWAS-PNAGGNDFAAVKLDADGMLLWQWQGGTTGDDKVNAAAMAEDGSVLMAGWTSGTWGEAEAGFYDFVAVKLDAAGKLLWNWQGGSQVNDVWWAVDMADDGSA---LFAGTTFGDWVQVSVGSWDFAAMKMDVDGNVLWTWQDGTRWSDTFWAGVMDKDGSVVLAGGTEGDFALGSKGQRDFVVVKLDAEGKELWRWQDGTSGMDEITCAAVGDDGSIVVAGNTDDGLYDHPLAPSHQDFTATKLDA-DGNMLWQWKGGASFGSYVEGVAVLDDGSILLSGFTADSFAGKNIGSYDVAAIKLDANGNEIWRYQDGTANFDRIDAAATGF----NGRMIMAGHTTGDWEGINHGKEGFLALMLDIDRPSPSP 1391
G +G+++ G T GD+ + GG DF AVKL DG+ W WQ GT+ +D +N A + DGSV++AG T G W AG D AVKLD +G +LW WQ G+ +++ + A+ S + G T G W +VG +DF A K+D DGN LW+WQDGT DT A +D DGSV LAG TEGD+ ++G+ DF V KLDA G WRWQDGT + VG DG + +AG + G + + + F K+D DG+ LW+W+ G S + G A+LDD S++++G++ +A N G D A +LDANG+E+WR+Q GT + D I AA R I+AG T G W+G N+G+E F+ + LD+ P P
Sbjct: 202 GDNGTIIAVGRTDGDFFPFVSLGGFDFLAVKLGPDGVYSWHWQDGTSDEDNLNDAVVNSDGSVVLAGSTEGDWSGTNAGLGDLAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNVGGYDFCAAKLDADGNELWSWQDGTDADDTTKAVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLDANGTLAWRWQDGTEDEEFGLMVVVGRDGGVYLAGYST-GAFGG-INKGSEGFVVVKIDGRDGSELWRWQNGTSAADKLFGAAILDDDSVVVTGYSEGDWAETNAGGSDFCAARLDANGSEMWRWQAGTDSSDWITAATVSQVVAGAPRAILAGTTEGSWDGDNNGEEDFVLVSLDVGEVEPIP 586
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Match: D7FXY5_ECTSI (von Willebrand factor type D domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY5_ECTSI) HSP 1 Score: 270 bits (690), Expect = 1.140e-77 Identity = 174/439 (39.64%), Postives = 234/439 (53.30%), Query Frame = 3
Query: 189 MATE---LWSWQNGTSSAD-MFDAATMGLDGSVVLAGYTGGDWASPNAGGNDFAAVKLDADGMLLWQWQGGTTGDDKVNAAA-----------MAEDGS---------VLMAGWTSGTW-GEAEAGFYDFVAVKLDAA-GKLLWNWQGGSQVNDVWWAVDMADDGSAL-FAGTTFGDWVQVSVGSW-DFAAMKMDV-DGNVLWTWQDGTRWSDTFWAGVMDKDGSVVLAGGTEGDFALGSKGQRDFVVVKLDAEGKELWRWQDGTSGMDEITCAAVGDDGSIVVAGNTDDGLYDHPLAPSHQDFTATKLDADGNMLWQWKGGASFGSYVEGVAVLDDGSILLSGFTADSFAGKNIGS--YDVAAIKLDANGNEIWRYQDGTANFDRIDAAA-TGFNGRMIMAGHTTGDWE-------------GINHGKEGFLALMLDI 1370
MATE LWSWQ+GTS D ++ A +G D S VLAG T GDWA N G DF AVK DG W+ Q GT D + AA MA G+ +++AG+T G W G A AG DFVAV + + G LW+WQ G++ +DV V GSA+ AG T GDW + G DFAA+K++ DG+ +W +QDG+ DT + +D +VVLAG TEG + G+ D VVKLDA+G LWRWQ GT+ D + AAV +DGSIVVAG T D KLD DGN LW W+ G + A+ +DG +L+G++ +A + G+ D+ A+KL G +WR+QDG A D + AAA TG G +++AG + W+ G+ E F+A+ LD+
Sbjct: 1 MATEPTLLWSWQDGTSGTDNLYGVAAVGGDDSFVLAGRTQGDWAETNEGDFDFMAVKFAQDGTEQWRLQAGTPETDTFHDAAAVTSSPSTVANMAATGTSAAGDESTAIILAGFTKGGWDGAASAGGSDFVAVSVASGDGSQLWSWQDGTEEDDVLMGVVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDDTVVLAGYTEGSLGGDNAGETDCAVVKLDADGGVLWRWQGGTAESDVCSAAAVAEDGSIVVAGYTVGSWGGSEANAGEDDLVVVKLDKDGNELWHWQEGTPLKDRLFAAALCEDGGFVLAGYSEGDWAAADAGAGGSDLIAVKLSPEGEVLWRWQDGNAGSDWVTAAASTGSGGSIVLAGTSEATWQDSATTTTTGDDTTGLT--TEDFVAISLDV 437
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Match: D8LAU1_ECTSI (PEGA domain family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU1_ECTSI) HSP 1 Score: 250 bits (638), Expect = 2.610e-68 Identity = 174/429 (40.56%), Postives = 225/429 (52.45%), Query Frame = 3
Query: 189 MATELWSWQNGTSSADMFDAATMGLDGSVVLAGYTGGDWASPNAGGNDF----AAVKLDADGMLLWQWQGGTTGDDKVNAAAMAEDGSVLMAGWTSGTWGEAEAGFYDFVAVKLDA-AGKLLWNWQGGSQVNDVWWAVDMADDG-SALFAGTTFGDWVQVSVGSWDFAAMKMD-VDGNVLWTWQDGTRWSDTFWAGVMDKDGS-VVLAGGTEGDFALGSKGQRDFVVVKLDAEGKELWRWQDGTSGMDEITCAAVGDDGSIVVAGNTDDGLYDHPLAPSHQDFTATKLDADGN-MLWQWKGGASFGSYVEGVAVLDDGSILLSGFTADSFAGKNIGSYDVAAIKLDANGNEIWRYQDGTANFDRIDAAATGFNGRMIMAGHTTGDWE-GINHGKEGFLALMLDIDRPSPSPVFRAPGMDPTIPSPTATP 1445
MATE W WQ GT+ D +A MG DGS VLAG + G W NA +D AA KLDADG +LW+WQ D AAA E SV+ AG+ SG W GF DF AV LDA +G+LLW WQ GS+ DV + +AD+G S + AG T G++ V+ GS DF A+K++ DG+ +W WQDGT D A DG+ VL G T+GD+ + G DF VV LD +G E WRWQDGT+ + + AV DDGSI++AG + D + FTA KL ADG + W+W+GG + D S L YD+AA G +G+MI+AG+T G WE G N G + FLA+ML+ +P+P +PG D T+ PTA P
Sbjct: 1 MATEEWYWQAGTAETDYLNAVLMGSDGSSVLAGLSFGLWNGTNADTSDASLRPAATKLDADGNILWKWQH----DINAFAAAAGEGRSVVTAGFASGGWEGTGLGFVDFTAVSLDADSGELLWKWQDGSEGFDVIYGATLADEGESVVMAGYTSGNFSGVNAGSNDFVAIKLNFTDGSEVWRWQDGTDEWDQIGAVAETADGTGFVLVGSTQGDWDGDNAGNGDFAVVMLDVDGNESWRWQDGTTEQEWLVGVAVQDDGSILLAGQQMETTGDESVF-----FTALKLQADGEEVTWRWQGGNA-----------GDASRL----------------YDMAA----------------------------GADGKMILAGYTDGSWEDGANLGADDFLAVMLNTIATTPAP--SSPGGD-TVGGPTAAP 362
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI) HSP 1 Score: 242 bits (618), Expect = 2.090e-67 Identity = 147/388 (37.89%), Postives = 215/388 (55.41%), Query Frame = 3
Query: 198 ELWSWQNGTS-SADMFDAATMGLDGSVVLAGYTGG--DWASPNAGGNDFAAVKLDADGMLLWQWQGGTTGDDKVNAAAMAEDGSVLMAGWTSGTW-GEAEAGFYDFVAVKLDAAGKLLWNWQGGSQVNDVWWAVDMADDGSALFAGTTFGDWVQVSVGSWDFAAMKMDV-DGNVLWTWQDGTRWSDTFWAGVMDK-DGSVVLAGGTEGDFALGSKGQRDFVVVKLDAEGKELWRWQDGTSGMDEITCA---AVGDDGSIVVAGNTDDGLYDHPLAPSHQDFTATKLDADGNMLWQWKGGASFGSYVEGVAVLDDG-SILLSGFTADSFAG---KNIGSYDVAAIKLDANGNEIWRYQDGTANFDRIDAAATGFNGRMIMAGHTTGDWE 1322
E+W +Q G+S D + +GS LAG T G D + NAGG D A KLD+DG+LLW WQ GTTG+D ++ AA +DG V++ G+++GT G G DF+A+K D+ G W WQ G++ ++V DG+ + G T GDW + + G W A+K+DV DG+V+W +Q G G + DGS+V+ G T+GD+ G DF V LD +G ELWR+QDG+ + I+ A A DGS+V+AG TD G Y A + QDF KL +G + W W+ G + EGVA DG S++ +G+T ++A ++ D + +D +G +W YQ GT ++D G +G ++AG + G WE
Sbjct: 7 EIWRFQAGSSYDDDAVYGVSTDAEGSFFLAGKTTGSLDGITLNAGGEDMAVGKLDSDGVLLWSWQEGTTGEDTMSDAAATDDGGVVVGGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGS--LFSISSAWGVAALSDGSVVLAGTTD-GDYAGTNAGA-QDFAVVKLTEEGVLDWTWQDGTLYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTSYDNFIGVDVGPDGAALLAGFSQGAWE 390
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 251 bits (641), Expect = 1.010e-66 Identity = 166/426 (38.97%), Postives = 226/426 (53.05%), Query Frame = 3
Query: 255 MGLDGSVVLAGYTGGDWASPNAGGNDFAAVKLDADGMLLWQWQGGTTGDDKVNAAAMAEDGSVLMAGWTSGTWGEAEAGFYDFVAVKLDAAGKLLWNWQGGS-QVNDVWWAVDMADDGSALFAGT-TFGDWVQVSVGSWDFAAMKMDVDGNVLWTWQDGTRWSDTFWAGVM-DKDGSVVLAGGTEGDFALGSKGQRDFVVVKLDAEGKELWRWQDGTSGMDEITCAAVGDDGSIVVAGNTDDGLYDHPLAPSHQDFTATKLDADGNMLWQWKGGASFG-SYVEGVAVLDDGSILLSGFTADS--FAGKNIGSYDVAAIKLDANGNEIWRYQDGTANFD-RIDAAATGFNGRMIMAGHTTGDWEGI-NHGKEGFLALML-----DIDRP---------SPSPVFRAPGMDPT-----IPSPTATPTV 1451
MG DGS V GYT GDW + +AA+K+D +G ++W+W GTT V A + DGSV++AG T + Q S N + V +D GS + GT G+W SVG +DF A K+D DGN+LW WQDGT D WA V D++GSV++AG T DF+ S G DFV +KLD+ G LW WQDGTS DEI AA DG +V+AG T G + L DF A KLDA+G +W+W+GG + + V+V +DG++LL+G T S + K +GS D+A + L A+G EIWR++ G+++ D + A G +GRM+M G G W G N G E FL ++L D P SP+P A P+ +P+PT P+V
Sbjct: 1 MGSDGSSVTTGYTFGDWMGIDVDNPAWAALKVDEEGAVVWEWLNGTT-LSYVAGAVIGLDGSVILAGST------VDGXXXXXXXXXXXXXXXXXXXXQDNSIDANCRAYGVAASDSGSVVAVGTINDGEWATPSVGGYDFIAYKVDGDGNLLWKWQDGTIGFDILWAVVSADEEGSVIMAGMTSLDFSGPSVGSLDFVAIKLDSGGTTLWTWQDGTSSSDEIQAAAATGDGFVVLAGYTF-GEWSGGLTGEECDFAAVKLDANGTEVWRWQGGYEVEYNVIYAVSVQEDGTVLLAGRTGGSQVMSDKRVGSSDIATVMLGADGQEIWRWKQGSSSDDFMLRGMAAGSDGRMVMVGSINGSWGGEPNLGSEDFLVVLLNTSTLDTSTPPTTSPTVALSPAPATPAHAFPPSDTPVELPAPTLAPSV 418
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Match: A0A6H5JF09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF09_9PHAE) HSP 1 Score: 239 bits (611), Expect = 2.030e-65 Identity = 134/298 (44.97%), Postives = 178/298 (59.73%), Query Frame = 3
Query: 195 TELWSWQNGTSSADMF-DAATMGLDGSVVLAGYTGGDWASPNAG-GNDFAAVKLDA-DGMLLWQWQGGTTGDDKVNAAAMAEDGSVLMAGWTSGTWGEAEAGFYDFVAVKLDAAGKLLWNWQGGSQVNDVWWAVDMADDGSALFAGTTFGDW--VQVSVGSWDFAAMKMDVDGNVLWTWQDGTRWSDTFWAGVMDKDGSVVLAGGTEGDFALGSKGQ--RDFVVVKLDAEGKELWRWQDGTSGMDEITCA-AVGDDGSIVVAGNTDDGLYDHPLAPSH-------QDFTATKLDADGN 1043
+ LWSWQ+GT D+ G +VVLAG TGGDWA NAG G DFAAVKL+A DG +W++Q G++GDD + + A AED +V++AG+T G+ G AG D VKLDA G +LW WQGG+ +DV A +A+DGS + AG T G W + + G D +K+D DGN LW WQ+GT D +A + +DG VLAG +EGD+A G D + VKL EG+ LWRWQDG +G D +T A ++G GSIV+AG ++ D +DF A LD G+
Sbjct: 88 SRLWSWQDGTEEDDVLVGLVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDDTVVLAGYTDGSLGGVNAGETDCTVVKLDADGGVLWRWQGGTAESDVCSATVVAEDGSIVLAGYTVGSWDGSEANAGEEDLVVVKLDKDGNELWHWQEGTSLKDRLFAAALCEDGGFVLAGYSEGDWAAADAGAGGSDLIAVKLSPEGEVLWRWQDGNAGSDWVTAATSIGSGGSIVLAGTSEATWQDSATTTGDDTTGLTTEDFVAISLDGGGS 385
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE) HSP 1 Score: 243 bits (621), Expect = 8.100e-64 Identity = 155/412 (37.62%), Postives = 217/412 (52.67%), Query Frame = 3
Query: 189 MATELWSWQNGTSSADMFDAATMGLDGSVVLAGYTGGDWASPNAGGNDFAAVKLDADGMLLWQWQGGTTGDDKVNAAAMAEDGSVLMAGWTSGTWGEAEAGFYDFVAVKLDAAGKLLWNWQGGSQVNDVWWAVDMADDGSALFAGTTFGDWVQVSVGSWDFAAMKMDVDGNVLWTWQDGTRWSDTFWAGVM-DKDGSVVLAGGTEGDFALGSK-GQRDFVVVKLDA-EGKELWRWQDGTSGMDEITCAAVGDDGSIVVAGNTDDGLYDHPLAPSHQDFTATKLDADGNMLWQW-----KGGASFGSYVEGVAVLDDGSILLSGFTADSFAGKNIGSYDVAAIKLDANGNEIWRYQDGTANFDRIDAAATGFNGRMIMAGHTTGDWEGINHGKEG-FLALMLDIDR---PSPS 1388
M TELW WQ+GTS D+F MG +GS VLAG T G W N GGND AA+KLDA+G LW++Q DGSV++AG + DF + +D+ + + MA DGS + G T+G W + G DFAA ++D +G +W +QDGT D A M D D SVV+AG T +F+ S G D VVVKL+A G E+WR+QDGTS D++ AV +D IVVAG+TD G++ A DF A KL + ++ + + G + +++GVA+ DGS++L G T + G N G D + L A+G E+WR+Q+G GR+I+AG+T G W N ++ F+A+MLD+ P+PS
Sbjct: 1 MPTELWVWQDGTSETDVFAGGAMGPNGSCVLAGATEGAWDGTNFGGNDMAAIKLDAEGNELWRYQ----------------DGSVVLAGHQN----------LDFYVTXXXXXXXXXXXXXXXTPEDDIPYWMAMAGDGSVICVGQTYGSWDGDANGDSDFAAFRLDGNGEEIWRYQDGTEEEDLMTAAAMGDGDSSVVMAGQTYVNFSGASNSGSADIVVVKLNATSGTEIWRYQDGTSVYDKLGLIAVAEDNGIVVAGSTD-GIWSGENA-GLDDFAAVKLSSFSRLIIMYAHVLPQDGTAENDFLDGVAIQADGSVILGGNTVGDWDGANAGERDFIMVALSADGEELWRWQNGXXXXXXXXXXXXXXXGRVILAGNTAGSWGATNSLEDAAFVAVMLDVPTSATPAPS 384
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE) HSP 1 Score: 229 bits (584), Expect = 5.400e-61 Identity = 143/379 (37.73%), Postives = 201/379 (53.03%), Query Frame = 3
Query: 219 GTS-SADMFDAATMGLDGSVVLAGYTGG--DWASPNAGGNDFAAVKLDADGMLLWQWQGGTTGDDKVNAAAMAEDGSVLMAGWTSGTW-GEAEAGFYDFVAVKLDAAGKLLWNWQGGSQVNDVWWAVDMADDGSALFAGTTFGDWVQVSVGSWDFAAMKMDV-DGNVLWTWQDGTRWSDTFWAGVMDK-DGSVVLAGGTEGDFALGSKGQRDFVVVKLDAEGKELWRWQDGTS-GMDEITCAAVGDDGSIVVAGNTDDGLYDHPLAPSHQDFTATKLDADGNMLWQWKGGASFGSYVEGVAVLDDG-SILLSGFTADSFAGKNIGSY---DVAAIKLDANGNEIWRYQDGTANFDRIDAAATGFNGRMIMAGHTTGDWE 1322
GTS S D + +GS LAG T G D + NAGG D AA KLD+DG +LW WQ G+T DD + AA +DG V+ AG+ +GT G G DF A+K D+ G W WQ G++ ++V DG+ + G T GDWV+ + G W A+K+DV DG+V+W +Q G G + DGS+V+ G T+GD+ G DF V L+ +G ELWR+QDG+ + A DGS+V+AG TD G Y A QDF KL +G + W W+ G + EG A DG S++ G+T ++A + D + +D +G +W YQ GT F+ +G ++AG++TG WE
Sbjct: 17 GTSYSHDYVYGVSADAEGSFFLAGTTEGSLDGITFNAGGTDMAAGKLDSDGAVLWYWQEGSTEDDTLADAAATDDGGVVFAGFYNGTLNGVPSEGLGDFFAIKFDSDGTEEWRWQDGTEKDEVILTCSKTADGNVVLTGMTQGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSYSVVSRGAASRADGSIVIGGSTDGDWDGELTGYADFFSVALNEDGSELWRFQDGSEFSISSAWGVAALSDGSVVLAGVTD-GDYAETNA-GEQDFALVKLTEEGVLDWTWQDGTPYDDGFEGAATGIDGTSMVFVGYTYGTWAAEQAEDEEDSDAVGMSMDGDGTLLWTYQAGTTGFETFVGVDVSPDGAALLAGYSTGTWE 393
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI) HSP 1 Score: 223 bits (567), Expect = 1.440e-60 Identity = 130/338 (38.46%), Postives = 189/338 (55.92%), Query Frame = 3
Query: 336 AAVKLDADGMLLWQWQGGTTGDDKVNAAAMAEDGSVLMAGWTSGTW-GEAEAGFYDFVAVKLDAAGKLLWNWQGGSQVNDVWWAVDMADDGSALFAGTTFGDWVQVSVGSWDFAAMKMDV-DGNVLWTWQDGTRWSDTFWAGVMDK-DGSVVLAGGTEGDFALGSKGQRDFVVVKLDAEGKELWRWQDGT--SGMDEITCAAVGDDGSIVVAGNTDDGLYDHPLAPSHQDFTATKLDADGNMLWQWKGGASFGSYVEGVAVLDDG-SILLSGFTADSFAG---KNIGSYDVAAIKLDANGNEIWRYQDGTANFDRIDAAATGFNGRMIMAGHTTGDWE 1322
AA KLD+DG +LW WQ GTT +D ++ AA +DG V+ AG+ +GT G A G DF+A+K D+ G W WQ G+++++ DG+ + G+T GDWV+ + G W A+K+DV DG+V+W +Q G G + DGS+V+ G T+GD+ G DF V LD +G ELWR+QDG+ S AA+ D GS+V+AG TD G Y A + QDF KL +G + W W+ G + EGVA DG S++ +G+T ++A ++ D + +D +G +W YQ GT N D G +G ++AG + G WE
Sbjct: 2 AAGKLDSDGAVLWSWQEGTTDEDALSDAAATDDGGVVFAGFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSD-GSVVLAGTTD-GNYAGTNAGA-QDFAVVKLTEEGVLDWTWQDGTPYDESFEGVATGIDGTSMVFAGYTFGTWAAAQAEDEDDMDAVGMSMDGDGTLLWTYQAGTTNHDNFIGVDVGPDGAALLAGFSAGTWE 336
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Match: A0A6H5JZC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC7_9PHAE) HSP 1 Score: 213 bits (541), Expect = 1.220e-57 Identity = 107/237 (45.15%), Postives = 141/237 (59.49%), Query Frame = 3
Query: 189 MATELWSWQNGTSSADMFDAATMGLDGSVVLAGYTGGDWAS-PNAGGNDFAAVKLDADGMLLWQWQGGTTGDDKVNAAAMAEDGSVLMAGWTSGTWGEAEAGFYDFVAVKLDAAGKLLWNWQGGSQVNDVWWAVDMADDGSA---LFAGTTFGDWVQVSVGSWDFAAMKMDVDGNVLWTWQDGTRWSDTFWAGVMDKDGSVVLAGGTEGDFALGSKGQRDFVVVKLDAEGKELWRWQ 887
MATE W WQ G + + G +G++V G T GD+ + GG DF AVK+ DG+ LW WQ GT+ +D +N A + DGSV++AG T G WG AG DF AVKLD +G +LW WQ G+ +++ + A+ S + G T G W + G +DF A K+D DGN LW+WQDGT DT A +D DGSV LAG TEGD+ ++G+ DF V KL+A G WRWQ
Sbjct: 1 MATEDWRWQGGGPANENMKGVAAGGNGTIVAVGRTDGDFFPFASLGGFDFLAVKIGPDGLYLWHWQDGTSDEDNLNDAVVNSDGSVVLAGSTEGDWGGTNAGLGDFAAVKLDESGAVLWKWQSGTSDDELLVGITSANSASGSEVVLVGRTEGSWAASNAGGYDFCAAKLDADGNELWSWQDGTGADDTTKAVAVDGDGSVFLAGYTEGDWNQPNEGETDFAVTKLEANGTLAWRWQ 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2826.7720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2826.7720.1 >prot_H-paniculata_contig2826.7720.1 ID=prot_H-paniculata_contig2826.7720.1|Name=mRNA_H-paniculata_contig2826.7720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=470bp MATELWSWQNGTSSADMFDAATMGLDGSVVLAGYTGGDWASPNAGGNDFAback to top mRNA from alignment at H-paniculata_contig2826:7513..18773- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2826.7720.1 ID=mRNA_H-paniculata_contig2826.7720.1|Name=mRNA_H-paniculata_contig2826.7720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11261bp|location=Sequence derived from alignment at H-paniculata_contig2826:7513..18773- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2826:7513..18773- >mRNA_H-paniculata_contig2826.7720.1 ID=mRNA_H-paniculata_contig2826.7720.1|Name=mRNA_H-paniculata_contig2826.7720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2820bp|location=Sequence derived from alignment at H-paniculata_contig2826:7513..18773- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |