prot_H-paniculata_contig11210.771.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11210.771.1
Unique Nameprot_H-paniculata_contig11210.771.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length584
Homology
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BLAST of mRNA_H-paniculata_contig11210.771.1 vs. uniprot
Match: D7FWR6_ECTSI (Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR6_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 5.560e-6
Identity = 38/66 (57.58%), Postives = 43/66 (65.15%), Query Frame = 0 
Query:  513 DMFLPSRRPLREMGECDD---WGAEGEEEFMSMLNLAMDEQQDAEARRTGAASMASLEGLGWDDED 575
            +  L S RPL E GE DD   WGA+GEEEFMSMLNLAM E+QDAE  RT   +   +E L  D ED
Sbjct:  756 EQSLLSPRPLDEFGEGDDGYDWGADGEEEFMSMLNLAM-EEQDAELSRTKGGAAMDMELLDMDMED 820
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11210.771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWR6_ECTSI5.560e-657.58Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrola... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 239..272
NoneNo IPR availablePANTHERPTHR21704:SF19coord: 5..326
IPR033031SCC2/Nipped-B familyPANTHERPTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDcoord: 5..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11210contigH-paniculata_contig11210:1465..4426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11210.771.1mRNA_H-paniculata_contig11210.771.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11210 1459..4426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11210.771.1 ID=prot_H-paniculata_contig11210.771.1|Name=mRNA_H-paniculata_contig11210.771.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=584bp
MLKFQQQQQLQVYAQQSQAAQFQALASQVCRSSATGISAAGGSAPASAGA
VPPSPSFSGGAMRPASPAGSTVSLPAGTAASGAGAGAGDNAIGGFTLPPT
LTSKAGLGVGSGGGRDGTTSAVEGGSTHGGAGSLIGAGLGAAGRPGPAVA
TGGGGGGGVGGGGSGAIAAHQQQATLMQNFEASTAASRAAAAASGGGGGV
IEAAAASGGVGVGGARSGGNMPNVVEQQMLIRQQRQMAAAMAQQQLQLIR
QQQQQQQQQQQQQNQNQNQNQQQPDPTTALAGPQASFVQNLWLAGGIGVG
PHQQAITALSLTAQQEQQQQQQQQAQLLASKVFPSNNVGQPRADAVGTGE
VAAGLALTESPGAAAPGTAEIGSLQPQGRGGGQSFTASAGAAAAVTSSGS
APMPLDFVSLQQQQQQEIAASGVGGMTTFGAPAPSVASADGSVCGATTGG
GGDGSKTVRPPPTGSGVGFAGIQQTVVGGTADERGTSGGMGGSADGRAAK
DAGSSAAEGADGDMFLPSRRPLREMGECDDWGAEGEEEFMSMLNLAMDEQ
QDAEARRTGAASMASLEGLGWDDEDDFHFEGEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033031SCC2/Nipped-B