mRNA_H-paniculata_contig28243.7713.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Match: W7T759_9STRA (Tetratricopeptide TPR-1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T759_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.000e-39 Identity = 71/128 (55.47%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 1 QAVACYRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLGMVLHSNKRYLDALDMLELASNEEPSNPQASFQRAXXXXXXXXXXXXXXXXXXXXXNVPKESAVYFLMGKV 384
+AVACYR A+R D RHYNAWYGLG+IY RQEKY++AEYHF RALSIN SSVL YLGMV H+N + L AL+ML AS +P NPQA FQRA + P+E++V+FL+GK+
Sbjct: 116 KAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKI 243
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Match: A0A7R9ZK66_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZK66_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.810e-37 Identity = 68/128 (53.12%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 1 QAVACYRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLGMVLHSNKRYLDALDMLELASNEEPSNPQASFQRAXXXXXXXXXXXXXXXXXXXXXNVPKESAVYFLMGKV 384
+AVAC+R AI D RHYNAWYGLG+IYHRQEKYD+AEYHF+RA+SINPQSSVLR LGM +N + ALD L A +P NPQA FQRA P+E+ ++F +GKV
Sbjct: 6 KAVACFRSAIHVDDRHYNAWYGLGAIYHRQEKYDLAEYHFQRAVSINPQSSVLRCNLGMTQFANGKAYQALDTLGEAFRLDPHNPQARFQRASIYVALNRPQDALVELEKVRDAAPREATIHFAIGKV 133
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Match: A0A4D9D1W2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W2_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.190e-36 Identity = 71/128 (55.47%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 1 QAVACYRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLGMVLHSNKRYLDALDMLELASNEEPSNPQASFQRAXXXXXXXXXXXXXXXXXXXXXNVPKESAVYFLMGKV 384
+AVACYR A+R D RHYNAWYGLG+IY RQEKY++AEYHF RALSIN SSVL YLGMV H+N + L AL+ML AS +P NPQA FQRA + P+E++V+FL+GK+
Sbjct: 653 KAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLAHASAIQPGNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKI 780
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Match: A0A7S4N5K4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5K4_9STRA) HSP 1 Score: 140 bits (352), Expect = 8.210e-36 Identity = 69/128 (53.91%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 1 QAVACYRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLGMVLHSNKRYLDALDMLELASNEEPSNPQASFQRAXXXXXXXXXXXXXXXXXXXXXNVPKESAVYFLMGKV 384
+AV CYR A+R+D RHYNAWYGLG+IY+RQEKYD+AEYHFRRALS+NPQSSVL +LGM LH+N + +ALD L A +P NPQA +QRA P+E++V+F MG+V
Sbjct: 872 KAVQCYRDALRSDGRHYNAWYGLGAIYYRQEKYDLAEYHFRRALSVNPQSSVLHCHLGMALHANGKPYEALDALAGAFRLDPRNPQARYQRATIWMSVDRPAEALTELERVRDAAPREASVHFAMGRV 999
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Match: A0A7S2EVH2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVH2_TRICV) HSP 1 Score: 127 bits (320), Expect = 6.270e-34 Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 1 QAVACYRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLGMVLHSNKRYLDALDMLELASNEEPSNPQASFQRA 276
+A AC+R AIR+D RHYNAWYGLG+IY RQEKYD+AEYHFRRALSINPQSSVL +LGM H+N + +ALD L A +P NPQA +QRA
Sbjct: 75 KAAACFRDAIRSDDRHYNAWYGLGAIYFRQEKYDLAEYHFRRALSINPQSSVLHCHLGMTQHANGKPYEALDSLAGAFRLDPRNPQARYQRA 166
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Match: A0A7S3F8Q8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F8Q8_9VIRI) HSP 1 Score: 127 bits (320), Expect = 8.170e-33 Identity = 64/128 (50.00%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 QAVACYRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLGMVLHSNKRYLDALDMLELASNEEPSNPQASFQRAXXXXXXXXXXXXXXXXXXXXXNVPKESAVYFLMGKV 384
+ + CYR AIR D RHYNAWYGLG+IY RQEKYD+AE+HFRRAL+INP+SSVL YLGM +H N R+ +AL L +P N A FQ+A P+E+++YFLMGK+
Sbjct: 179 KGLTCYRGAIRIDARHYNAWYGLGAIYLRQEKYDLAEHHFRRALNINPRSSVLHCYLGMAIHRNGRHGEALKQLCDGIALDPKNALAKFQKANVLMAVERYHDALAELEALKAQAPREASLYFLMGKI 306
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Match: A0A7S2RQM5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RQM5_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.620e-32 Identity = 62/116 (53.45%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 37 DRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLGMVLHSNKRYLDALDMLELASNEEPSNPQASFQRAXXXXXXXXXXXXXXXXXXXXXNVPKESAVYFLMGKV 384
D RHYNAWYGLG+IY RQEKYD+AEYHFRRAL++NPQSSVL +LGMV H+N + +AL+ L A +P NPQA FQRA P+E++V+F MGKV
Sbjct: 1 DDRHYNAWYGLGAIYIRQEKYDLAEYHFRRALTLNPQSSVLYCHLGMVQHANGKPYEALNTLASAFRLDPKNPQARFQRANIWMSMDRPLEALDELERVRDAAPREASVHFAMGKV 116
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Match: A0A1Z5K6F8_FISSO (Anaphase-promoting complex subunit 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6F8_FISSO) HSP 1 Score: 129 bits (323), Expect = 4.840e-32 Identity = 64/127 (50.39%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 4 AVACYRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLGMVLHSNKRYLDALDMLELASNEEPSNPQASFQRAXXXXXXXXXXXXXXXXXXXXXNVPKESAVYFLMGKV 384
A+AC+R AIRT+ RHYNAWYGLG IYHRQEKYD+AEYHF RA I+P SS+LR G+ H+N + AL+ L AS +P NPQA FQRA P+E+ V+F +GKV
Sbjct: 473 AMACFRQAIRTNERHYNAWYGLGCIYHRQEKYDLAEYHFERACQIHPTSSILRCNWGISQHANGKAYQALETLSEASRLDPGNPQARFQRATIYSALHRPQEAALELEKVRDAAPREATVHFCLGKV 599
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Match: A0A7S3GYK7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYK7_9STRA) HSP 1 Score: 120 bits (301), Expect = 5.770e-32 Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 4 AVACYRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLGMVLHSNK---RYLDALDMLELASNEEPSNPQASFQRAXXXXXXXXXXXXXXXXXXXXXNVPKESAVYFLMGKV 384
A+ +R A+ + RHYNAWYGLGSIY RQEKY++AEYHFR+AL+INP SSVL YLGM LH+ + +ALD+L A+ ++ +NPQ FQRA + PKES V+ L+G+V
Sbjct: 1 AIESFRQALLHNDRHYNAWYGLGSIYFRQEKYELAEYHFRKALTINPASSVLHCYLGMALHAQSNGAKSAEALDILTAATQKDTANPQLHFQRAHILVAMGNFPEALSTLQIVEEHAPKESPVHALLGQV 130
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Match: A0A388JLQ8_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JLQ8_CHABU) HSP 1 Score: 127 bits (319), Expect = 2.250e-31 Identity = 64/128 (50.00%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 QAVACYRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLGMVLHSNKRYLDALDMLELASNEEPSNPQASFQRAXXXXXXXXXXXXXXXXXXXXXNVPKESAVYFLMGKV 384
+ + CYR AIR D RHYNAWYGLG+IY+RQEKY++AEYHFRRAL+IN SSVL YLGM LH+ +R +AL +L A + NP A FQ+A P+E++VYF MGK+
Sbjct: 713 EGLHCYRNAIRIDSRHYNAWYGLGTIYYRQEKYELAEYHFRRALAINHSSSVLYCYLGMALHALERNCEALALLSTAIAMDSKNPLAKFQKANVLMAEERYTEALAELERLKEVAPREASVYFAMGKI 840 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28243.7713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig28243.7713.1 >prot_H-paniculata_contig28243.7713.1 ID=prot_H-paniculata_contig28243.7713.1|Name=mRNA_H-paniculata_contig28243.7713.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp MAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALSINPQSSVLRVYLback to top mRNA from alignment at H-paniculata_contig28243:771..2691+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig28243.7713.1 ID=mRNA_H-paniculata_contig28243.7713.1|Name=mRNA_H-paniculata_contig28243.7713.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1921bp|location=Sequence derived from alignment at H-paniculata_contig28243:771..2691+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig28243:771..2691+ >mRNA_H-paniculata_contig28243.7713.1 ID=mRNA_H-paniculata_contig28243.7713.1|Name=mRNA_H-paniculata_contig28243.7713.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at H-paniculata_contig28243:771..2691+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |