mRNA_H-paniculata_contig2820.7698.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2820.7698.1
Unique NamemRNA_H-paniculata_contig2820.7698.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Match: A0A6H5JF67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF67_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 2.050e-130
Identity = 180/205 (87.80%), Postives = 200/205 (97.56%), Query Frame = 1 
Query:    1 VTDGAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGYDQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVNIMNAFVEYVKTGDESLQPALGMDGKITIFIGMAAARSAKEGRSVKIAEIAAEFGC 615
            + +G +GDVRTIHITSRDPAPPPVAYL+NSGGIFMDMTSHDFDMARFLVGDEI+EVFVTATAFDPEAKEADDFDTANTHLKFKNGAFG+IENSRRCSFGYDQRVEVFG+GGS+ GANR PQ+V++NN++GLNAG+PYSFFLDRYADSYVNIM+AFV+YVKTGDESL+PALG+DGK+TIFIGMAAARSAKEGR VKI+EIAAEFGC
Sbjct:   79 INEGTIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIDEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGAGGSISGANRSPQNVLVNNKDGLNAGVPYSFFLDRYADSYVNIMSAFVKYVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEIAAEFGC 283
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BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Match: D7FTB5_ECTSI (Inositol 2-dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTB5_ECTSI)

HSP 1 Score: 378 bits (971), Expect = 2.050e-129
Identity = 181/205 (88.29%), Postives = 200/205 (97.56%), Query Frame = 1 
Query:    1 VTDGAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGYDQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVNIMNAFVEYVKTGDESLQPALGMDGKITIFIGMAAARSAKEGRSVKIAEIAAEFGC 615
            + +G +GDVRTIHITSRDPAPPPVAYL+NSGGIFMDMTSHDFDMARFLVGDEI+EVFVTATAFDPEAKEADDFDTANTHLKFKNGAFG+IENSRRCSFGYDQRVEVFG+GGS+ GANR PQ+V++NNE+GLNAG+PYSFFLDRYADSYVNIM+AFV+YVKTGDESL+PALG+DGK+TIFIGMAAARSAKEGR VKI+EIAAEFGC
Sbjct:  187 INEGTIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIDEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGAGGSISGANRSPQNVLVNNEDGLNAGVPYSFFLDRYADSYVNIMSAFVKYVKTGDESLEPALGIDGKVTIFIGMAAARSAKEGRPVKISEIAAEFGC 391
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BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Match: Q9XEX0_GRAGA (Putative NAD-myo-inositol dehydrogenase (Fragment) n=1 Tax=Gracilaria gracilis TaxID=2777 RepID=Q9XEX0_GRAGA)

HSP 1 Score: 245 bits (626), Expect = 1.510e-79
Identity = 121/198 (61.11%), Postives = 152/198 (76.77%), Query Frame = 1 
Query:    1 VTDGAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGYDQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVNIMNAFVEYVKTGDESLQPALGMDGKITIFIGMAAARSAKEGRSVKIAE 594
            V  GA+G +R  HITSRDPAPPP  YL NSGGIF+DM+SHD+DMARF+ G EIE V+VTA+AF+  AKEA+D DTA T LK  +G+FG I+NSRRCS+GYDQR+EVFGS GS+   NR P +V+I+NE GL+AGLPYSFF+DRYA++Y   M AFV+ +K G  +  P  G DG+ +I   MAAA+S  EGRSV++ E
Sbjct:   11 VASGAIGQLRMFHITSRDPAPPPAQYLANSGGIFLDMSSHDWDMARFITGAEIESVYVTASAFEEAAKEANDVDTAITVLKMSDGSFGTIDNSRRCSYGYDQRIEVFGSKGSLNSNNRAPDTVVISNEHGLSAGLPYSFFMDRYAEAYSGAMTAFVDMIKEGTPA--PCSGFDGRASIVAAMAAAKSHAEGRSVRLEE 206
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BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Match: A0A2V3J1X4_9FLOR (Putative oxidoreductase YrbE n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1X4_9FLOR)

HSP 1 Score: 239 bits (609), Expect = 1.140e-74
Identity = 116/198 (58.59%), Postives = 146/198 (73.74%), Query Frame = 1 
Query:    1 VTDGAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGYDQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVNIMNAFVEYVKTGDESLQPALGMDGKITIFIGMAAARSAKEGRSVKIAE 594
            V  GA+G VR  HITSRDPAPPP  YL  SGGIF+DMTSHD+DMARF+ G EIE V+VT  AF+  AK+ADD DTA T LK  +G+FG I+NSRRCS+GYDQR+EVFGS G++   NR P +V+ +NE G++AGLPYSFF+DRYA++Y   M  FV  +  G     P  G+DG+ +I   MAAA+S KEGR+V++ E
Sbjct:  184 VASGAIGQVRMFHITSRDPAPPPAEYLAQSGGIFLDMTSHDWDMARFITGAEIESVYVTGAAFEDAAKQADDIDTAITVLKMSDGSFGTIDNSRRCSYGYDQRIEVFGSTGTINSNNRAPNTVVTSNEMGISAGLPYSFFMDRYAEAYSGAMTTFVNMISNGTPP--PCTGLDGRASIVAAMAAAKSHKEGRAVRLEE 379
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BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Match: W7T7P4_9STRA (Myo-inositol 2-dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7P4_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.100e-71
Identity = 123/203 (60.59%), Postives = 146/203 (71.92%), Query Frame = 1 
Query:    1 VTDGAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGYDQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVNIMNAFVEYVKT----GDESLQPALGMDGKITIFIGMAAARSAKEGRSVKIAEI 597
            +  GA+G VRTI I SRDPAPPP  YLK SGGIF+DM+SHDFDMARFLVG +IEEVFV  TA+ PEA  A D DT  T L+F+NG FG +ENSR CSFGYDQRVEVFG  GS+QG NR P +V  ++ EG+ AGLPYSFF+DRY D+YV+I+ AFV  V      G E L  A   DGK T+  GMAA  S +  R VK++E+
Sbjct:  207 IVQGAIGKVRTIRIVSRDPAPPPADYLKTSGGIFLDMSSHDFDMARFLVGSDIEEVFVQGTAWGPEAAGAGDLDTQITLLRFENGVFGTLENSRLCSFGYDQRVEVFGELGSLQGENRSPSTVTRSDAEGVTAGLPYSFFMDRYGDAYVDIVRAFVREVSGDGGGGVEHLASAA--DGKATVMAGMAAKASVQGRRLVKVSEM 407
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BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Match: A0A7S1TMJ0_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMJ0_9RHOD)

HSP 1 Score: 229 bits (583), Expect = 3.880e-71
Identity = 111/196 (56.63%), Postives = 143/196 (72.96%), Query Frame = 1 
Query:   10 GAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGYDQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVNIMNAFVEYVKTGDESLQPALGMDGKITIFIGMAAARSAKEGRSVKIAEI 597
            G +G+VR   I SRDPAPPP  YL+ SGGIF+DM SHDFDMARF+ G EIEEV+V  TAFDPEAK A+D D+  T LK  NG FG I+NSRRC+ GYDQR+EVFGS G + G N+ P +V ++N +G+ + LPYSFF+DRY D+Y N M AFV+ +K   ++  P    DG+ +I +  AA+ SAKEGR VK++E+
Sbjct:  162 GTIGEVRMFQIVSRDPAPPPQEYLEKSGGIFLDMASHDFDMARFITGAEIEEVYVCGTAFDPEAKGANDLDSVITTLKMSNGTFGTIQNSRRCALGYDQRIEVFGSDGVLTGQNKAPNTVQLSNNKGIQSPLPYSFFMDRYLDAYSNAMRAFVDMIKK--DAPAPVTFTDGRASIVVARAASLSAKEGRPVKLSEV 355
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BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Match: M2X2D7_GALSU (Myo-inositol 2-dehydrogenase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X2D7_GALSU)

HSP 1 Score: 229 bits (584), Expect = 2.010e-70
Identity = 112/199 (56.28%), Postives = 147/199 (73.87%), Query Frame = 1 
Query:    1 VTDGAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGYDQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVNIMNAFVEYVKTGDESLQPALGMDGKITIFIGMAAARSAKEGRSVKIAEI 597
            V DG++G++R  HI SRDPAPP   YL NSGGIF+DMTSHDFDMARF+ G EI++VFV+  AFD EAK+A+D DT   HL+ KNG+ G I+NSRRCS+GYDQR+EVFGS GS+ G N  P  V+ +N++GL+   P+SFF+DRY  +YV+IM AF+E ++ G  S  P  G DG+  +   +AAARS KE R + ++EI
Sbjct:  225 VEDGSIGELRMFHIHSRDPAPPTAEYLANSGGIFLDMTSHDFDMARFITGSEIDQVFVSGNAFDDEAKQANDLDTVIIHLRMKNGSMGTIDNSRRCSYGYDQRIEVFGSKGSLLGNNISPNQVIWSNDQGLHQSRPHSFFMDRYEKAYVHIMQAFLEMLRKGMPS--PVDGKDGRAPVVAALAAARSWKENRPIALSEI 421
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BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Match: A0A7S2ZAH6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAH6_9RHOD)

HSP 1 Score: 226 bits (575), Expect = 6.800e-70
Identity = 113/200 (56.50%), Postives = 143/200 (71.50%), Query Frame = 1 
Query:    1 VTDGAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGYDQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVNIMNAFVEYVKTGDESLQPAL-GMDGKITIFIGMAAARSAKEGRSVKIAEI 597
            + +GA+GDVR  HITSRDP+PPP  YLK SGGIF+DM SHDFDMARF+   EI+EVFVT  AF PEA EA+DFD+  T L+ KNG+FG IENSR C+FGYDQR+EVFGS G++ G NR P  V+++N EG+ +GLP+SFF+DRY + Y +IM  FV  +    E   P++ G DG+  I   MA   SA E R V + E+
Sbjct:  160 ILNGAIGDVRMFHITSRDPSPPPAEYLKKSGGIFLDMISHDFDMARFVSQSEIDEVFVTGKAFGPEAAEAEDFDSVVTMLRMKNGSFGTIENSRSCAFGYDQRIEVFGSKGTLTGNNRGPSEVVLSNSEGITSGLPFSFFMDRYTEGYRDIMTEFVNMIVNQKE---PSVDGYDGRAPILAAMACKLSAAENRPVLLKEV 356
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BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Match: A0A5J4YNW9_PORPP (Putative oxidoreductase YrbE n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNW9_PORPP)

HSP 1 Score: 223 bits (568), Expect = 1.240e-68
Identity = 111/196 (56.63%), Postives = 141/196 (71.94%), Query Frame = 1 
Query:   10 GAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGYDQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVNIMNAFVEYVKTGDESLQPALGMDGKITIFIGMAAARSAKEGRSVKIAEI 597
            GA+G VR   I SRDPAPPP  YL+ SGGIF+DM SHDFDMARF+ G EI+EV+V  TAFDPEAK A+D D+    LK  +G+FG I+NSRRC+ GYDQR+EVFG  G + G N+ P +V +++  G+ AGLPYSFF+DRY D+Y   ++AFVE VKTG  +  P  G DG+  I    AA+ SAKE R VK++E+
Sbjct:  182 GAIGPVRMFQIVSRDPAPPPQEYLEKSGGIFLDMASHDFDMARFVTGAEIDEVYVCGTAFDPEAKGANDLDSLIMTLKMSDGSFGTIQNSRRCALGYDQRIEVFGRDGILTGNNKAPNTVTLSSATGVQAGLPYSFFMDRYLDAYAGAIDAFVEMVKTG--APPPCTGADGRAPIVAAKAASLSAKENRPVKLSEV 375
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BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Match: A0A1X6NLA5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLA5_PORUM)

HSP 1 Score: 222 bits (566), Expect = 4.420e-68
Identity = 115/199 (57.79%), Postives = 137/199 (68.84%), Query Frame = 1 
Query:    1 VTDGAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVGDEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGYDQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVNIMNAFVEYVKTGDESLQPALGMDGKITIFIGMAAARSAKEGRSVKIAEI 597
            V+ GA+GDVRT  ITSRDPAPPP  YL  SGGIF+DM SHDFDMARF+ G EIE VFVT  A +  A+EA D DT  T LK  NGAFG IENSRRC FGYDQRVEVFG  GSV G+N+   +V +N + G+++ LP+ FF+DRYA +Y  IM AFV+ V    E   P  G DG+  I    AA  S KEGR V++ E+
Sbjct:  190 VSSGAIGDVRTFTITSRDPAPPPADYLAKSGGIFLDMASHDFDMARFVCGAEIESVFVTGAAIESAAQEAGDLDTVITVLKMSNGAFGTIENSRRCGFGYDQRVEVFGGKGSVIGSNKANDTVTVNTDSGIDSSLPFDFFMDRYAAAYTGIMGAFVDMVAQDGEV--PVGGADGRAPIVAAKAAQLSVKEGRLVRLDEV 386
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2820.7698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF67_9PHAE2.050e-13087.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTB5_ECTSI2.050e-12988.29Inositol 2-dehydrogenase n=2 Tax=Ectocarpus TaxID=... [more]
Q9XEX0_GRAGA1.510e-7961.11Putative NAD-myo-inositol dehydrogenase (Fragment)... [more]
A0A2V3J1X4_9FLOR1.140e-7458.59Putative oxidoreductase YrbE n=1 Tax=Gracilariopsi... [more]
W7T7P4_9STRA1.100e-7160.59Myo-inositol 2-dehydrogenase n=2 Tax=Monodopsidace... [more]
A0A7S1TMJ0_9RHOD3.880e-7156.63Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
M2X2D7_GALSU2.010e-7056.28Myo-inositol 2-dehydrogenase n=1 Tax=Galdieria sul... [more]
A0A7S2ZAH6_9RHOD6.800e-7056.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YNW9_PORPP1.240e-6856.63Putative oxidoreductase YrbE n=1 Tax=Porphyridium ... [more]
A0A1X6NLA5_PORUM4.420e-6857.79Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2820contigH-paniculata_contig2820:185..4986 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.6
Seed ortholog evalue4.8e-103
Seed eggNOG ortholog2880.D7FTB5
KEGG rclassRC00182
KEGG koko:K00010
KEGG ReactionR01183,R09951
KEGG Pathwayko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.D-xylose 1-dehydrogenase (NADP ) activity
EggNOG OGsCOG0673@1,KOG2741@2759
EC1.1.1.18,1.1.1.369
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons5
Model size618
Cds size618
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2820.7698.1prot_H-paniculata_contig2820.7698.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2820 185..4986 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929856.107048-CDS-H-paniculata_contig2820:184..3491622929856.107048-CDS-H-paniculata_contig2820:184..349Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2820 185..349 +
1691481041.6562135-CDS-H-paniculata_contig2820:184..3491691481041.6562135-CDS-H-paniculata_contig2820:184..349Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2820 185..349 +
1622929856.119161-CDS-H-paniculata_contig2820:1183..12671622929856.119161-CDS-H-paniculata_contig2820:1183..1267Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2820 1184..1267 +
1691481041.6663132-CDS-H-paniculata_contig2820:1183..12671691481041.6663132-CDS-H-paniculata_contig2820:1183..1267Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2820 1184..1267 +
1622929856.131775-CDS-H-paniculata_contig2820:1576..17271622929856.131775-CDS-H-paniculata_contig2820:1576..1727Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2820 1577..1727 +
1691481041.6741228-CDS-H-paniculata_contig2820:1576..17271691481041.6741228-CDS-H-paniculata_contig2820:1576..1727Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2820 1577..1727 +
1622929856.1527548-CDS-H-paniculata_contig2820:4066..42071622929856.1527548-CDS-H-paniculata_contig2820:4066..4207Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2820 4067..4207 +
1691481041.6817636-CDS-H-paniculata_contig2820:4066..42071691481041.6817636-CDS-H-paniculata_contig2820:4066..4207Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2820 4067..4207 +
1622929856.1741486-CDS-H-paniculata_contig2820:4909..49861622929856.1741486-CDS-H-paniculata_contig2820:4909..4986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2820 4910..4986 +
1691481041.6894329-CDS-H-paniculata_contig2820:4909..49861691481041.6894329-CDS-H-paniculata_contig2820:4909..4986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2820 4910..4986 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2820.7698.1

>prot_H-paniculata_contig2820.7698.1 ID=prot_H-paniculata_contig2820.7698.1|Name=mRNA_H-paniculata_contig2820.7698.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=206bp
VTDGAVGDVRTIHITSRDPAPPPVAYLKNSGGIFMDMTSHDFDMARFLVG
DEIEEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGIIENSRRCSFGY
DQRVEVFGSGGSVQGANRMPQSVMINNEEGLNAGLPYSFFLDRYADSYVN
IMNAFVEYVKTGDESLQPALGMDGKITIFIGMAAARSAKEGRSVKIAEIA
AEFGC*
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mRNA from alignment at H-paniculata_contig2820:185..4986+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2820.7698.1 ID=mRNA_H-paniculata_contig2820.7698.1|Name=mRNA_H-paniculata_contig2820.7698.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4802bp|location=Sequence derived from alignment at H-paniculata_contig2820:185..4986+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTACCGACGGCGCCGTCGGAGATGTTCGCACTATCCACATCACCAGTAG
GGACCCGGCGCCGCCTCCGGTGGCCTACCTGAAGAACAGCGGCGGTATCT
TCATGGACATGACCAGCCACGACTTCGACATGGCCCGCTTCCTCGTTGGC
GACGAGATCGAGGAGGTGAGTTGTTCAATGATGGAGGGAAGGAAGCGAGG
GGGGCATAAATTGCTGTTGAAAGCATGATACTACTCGTAAAGCAAACCGG
ACATATGCCGCATCATTTATCCATAAACGGAACACAATCGAGGGGGAACA
CAACTGTTGTACTTTTAAAGTTTTGCCTTAACCGGTGTGTCACCTTCATG
CATTGAAATTAATCGCACACGGACACCCGCACCTGCCATGCAGTAGTTGA
ACAATGTTTTCCCGTGTCCCTGTCGACGCGGTTTAGATTGCACATCAGAG
TTCCAATTGCTATTTGTCATACTCCTTATATTATTGGGGGGAGGAGGGGG
GTGGGGGGGGAGGTTATGCAGATGAGCTCAAATCTCAGCTATGTACTTGA
AGTACTTGAACTTACTAGTAAAATTAGGTATAATAATGGGGGCTACACTC
GTAAAATTCCGCGAGAAGAGGACAAACTGATCCCCCTTCCCTCCCTCCCC
GGGGACAGTCAGACATATATTCGGCAATGAGAGCGGGAAGCTATTGAAAC
TCGCTCTCGAGCACGTGTGGTCGGTGGGTCTAATAACTAAGGCACACAAA
ACATGCATGCCGCCCCGCCCCCCGCCCCCGCCGGGGACATTGCTCCATTG
TTCCCCTATCTAGTATTACACAGTGCTTTGTTTGGAGTTTTGTAAATTTA
CCACATAGTGAGAGTGATGCCAGGTGCAACAAACCTACGAAGGGGATGCT
GTAAGGCAGATCCCTAGATGGGGGTTGTTTCGGTAAAGGCTTGTTGCTAT
ATTCCTGTTTTGACCGAACGTTCTCCATGGTTGTATGCGCATGATTCAGG
TGTTCGTGACCGCCACGGCCTTTGACCCCGAGGCAAAGGAGGCAGACGAC
TTCGACACGGCCAACACACACCTCAAGTTCAAGGTAAAGATGATGTTCGT
ATGACGGAAATTCTCAGGATAGACCGGCAAGTGGCAACTGTTGAGAATGA
GTATGTAAATGTTAGGGTTCCCTCGTAGTGGTGTTATATTTAGTTGTGCA
GGATGGTGGCAAATTTCAAAATCCTGACGCACGGTGGCTGTTGAGCAGAA
AATATACGTTGGTTTTGTTGGGCGACTTTACCTCAGTATGAGAGCTTTTG
CTTGTTACTGTACCGACTGTAAATGATGACAAATACAACGGTGACCCCCT
TCCCCCCATTCTTGAAACCAAACACAACGTGCGGTCTGTCAGAACGGCGC
CTTTGGTATCATCGAGAACTCTCGGCGGTGCTCTTTCGGGTACGACCAGA
GGGTGGAGGTTTTCGGCTCCGGCGGATCTGTTCAGGGCGCTAACCGCATG
CCTCAGAGCGTGATGATCAACAATGAGGAAGGGCTCAATGCTGGTGAGCG
GGAGGCACGTCTTGTGTGATAGCAGGGGAGTGTTGGAGGGCGCGCGCGAG
GGGCGGGGTGATTGACACTCGGCAGCATGTTGAGGTCTTCGTGTCACAGT
AATGACATTTTCCGATTTCGAGGATGAAGCAAACCGATTTTACCATACCT
TTTCACATGATCGATAATTTCTCGCGTAACTATCCATGAACCGGGCTGTA
AAACAATAGATAGATACATAACCATTCGCGAACGGTAGAAAATATTATCT
AACATGGCCATCCGCAAACCGGACTTTCGTACAATCTCGAAAAACGACGT
GGGGGTTGGTTCATGACATGTCGAAGAATCCTGGTCATGATCACGTGTAA
TGTGCTGGCCAATTTGTGCTAAAAGAAATGCCGTCTCAAATCCGAGATCG
ACCTGATGCCTGCAACAGGAGGGAGTCGTCACTTGTGAGCGATCCTGTCT
TTGTCTGTGAACTAGCTGTATGCGCTGCTGGTATCTCTCGTGTTCATTGT
CCAAGGCTTTACTGTACCGAGATCCCTTCGCTTCGCGGGTCTTTTTATGA
TTGACATACATTGCCGTGCAGCCAGCTGCACCTGTGGTCCCAACCGGTGT
TTTCGTGTGCGGTTGGTCGCAATCATGCACGGCTCTGCGCGTTTGTTGGA
CTTGCCGTTGACAACGGAGATGCGTCGTGTTTTGCGCGTCGATGCTGCCT
GGTACAAATAGACCGTCCGTTGCCATCGCAGTATGGACCACCCGCCATGC
TTTCGCCCTTGCCATTGAGTTTTCACTGTCTCTCTGTACTGCCATGTGTA
TGAAGCGGTCGCCCGGGGGGCGTGCATGGGAAGCTTGCCTGTTGAAATAT
ACAGTAGTTTGGGCGTGGATCAGGTTCAGTGACGTGAGTGATGAGGCCGT
CGGTCCCGGACACAGTTGGAATAATAGTTTCGATGAATTTGTCATCCGGA
TTTTTTCTGTTTGCCCGTGATGTTGGTTGAGGTGGGGCCGGCTATAGTCA
AAATTCGCCGTGAAATAAACGTTTTGATTTCTGTCTCCCGTCTCTTTTTT
CCAGTCAAAATGTTTTAGCTGGATTCTTACTGGGAGGAAAATTAGTCAAA
ATTAAAGAAAACATGTGAACTCGGACTACCCCAAGCATAGTACCGAAGTA
CAGAGAATACTCTAGAAGAGGTCTATGTCGGCACCGTCATTGAAGGAATC
CAGGCTACGAGCAACGGAAGTTTAGCGTCATGAGCGAAGTTCCGGGGAAC
GAGCGCAACGGAGGGCGATATTGATGCCCTTGCATAGAAAAAGCCGGTAT
GTAAGCAGTCGACTTCGTTTTCTGAATGTAATACTGCACAGCTGTCTGTA
TTCGATTTGTGCTCTATTAGTATCAGCGACTGCAGCAGGTCGCTTGTCAT
CGCGGCTACGCAGGACCCGCTACCTTCAGCCTTCGCGTAGGCTGCACCTC
ACTCCCCTTTCTACTGCGTGAAACTACACTCCAAACGGATTCGGCCTTCT
CGCTTAACTTTTAATTCGATCGGTGCCCAGTTACAGGTTTAATCCGTCAA
AATTCTGATAGACGAAAAAATTACTTTTTCGATAGCCATATCAGACGGCC
GAGGTATTAGGGCGTACTGTATGTACGTATCTCAAACGTACTGAGATCGG
CTGTAATGACCAGGTAAAGGTCAGCAATCTCTCATTATACACACACAGTG
CTCCCCGCCATGATTCCGCAGGACCGATACGGAAGTATAGATGACCGGCA
TGGACATACATGACCAGAAAGATTTGGATGTGCAATCCTCACGTTGGAAA
AGGCCCCTTAAGTTGGTTATAAGCTTCTGATATGCCTATATACCCACATT
TTATTCCCCCTTCCCCTAAGTTTTGTCAGTTTGTGGATAATAACCGAATA
ATCCAGCGGCTTGAAGATGCTGAACACACCATCGTTTTCTTCTTTCTTTT
GATCCCCAGGAGATCTGGGCGAAAACTCTTGTGAAATTATAATGGGGATG
TTTTCGTCCAGCTGTAGTATACCAATTCTATCATGATGTCTCCATCTTTT
CGTAATTTTCTCTACAGTACAATAAGCTGTGCATTTCTGCTTGTATTTTG
GACTCGCTATTTGTGCTGTAGTACAATTCCAACCTCCTCCACGTCCTCAT
TCTCGCAGGCGCGTGGTCAGTGGCCCAACAACTACGGCATGCACAACACG
AGTAACCCCCTCCCTCCCCCTCACCCGCGCACCTTGCAAAGCTGCGTCCG
CCCAAGGATGCGTCGTCAACGGTCTAATATCCACGGTACGCATAACATGA
GGACTCCCTCCCCCTCGCTCTTTCTCGATCAGGTCTCCCGTACAGCTTTT
TCCTGGACCGGTACGCGGACTCTTACGTGAACATCATGAATGCATTCGTG
GAGTACGTGAAGACGGGAGACGAATCGTTGCAACCTGCGCTTGGCATGGA
CGGCAAGATCACTATCTTCATCGGTGAGGGATACACGAGGTTATAAGCCA
GATTTATCTATTTGTGTCATGAGTCGTGGTTTGTGGTGGTAGTGAGGATC
AGTAGGGGGCGAGGGCGGGGGGGGAGGTATAGATCGCAAAAATATGGGAT
GCAGGTACACATCCTATCTACAACAAGAAGCCTTTACTGGACGGTCTGCC
GTTTTTTTGGCTTCGATTTCATTGCTCGTCTCTTTTTTGTTCCGTTGTAG
CACATGTATGTGATGAAATTATTTAGCCCATCGCCATGGCTATATTTTGG
GTGATCGTCAGCGAGTGTAGAACAACTTGAAAAGGGAGGTTGTTATTGTT
GACCACGATGGACCCACAAGAGACTATTGCCTGCTCTAGTGGATGTCTTT
CGAGTCGGATTTAGTGCGGTTCACGTATTCCGTTATGTTGTGTAGCAGGT
GAAGGAGCTGCCACTTATCCAGTGGCGGGAACTAAATGTTGTGTACGGGA
CCGGGGTTGAGGAATCGCAGGAACCGTAGGAACGTGCTGTTTACCCTACC
CTCCCCCCTCCGTCTATGCGTCTTTGATCTGTACTACAGTTTAAAATGAT
CTAGAAATAAAGTAGTCTCGGCCAAAATTATGTCGTTCTCTCCATATCCC
TCCCCCCCCCCGCCCGTGCCCTATTTTGTTTCAAATTTTCAATACTCATT
CCCTCCTTCCCTCCTTCCCCCTTAGGTATGGCTGCCGCACGATCTGCCAA
GGAAGGTCGCTCTGTCAAGATTGCCGAGATCGCAGCCGAGTTCGGTTGTT
AA
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Coding sequence (CDS) from alignment at H-paniculata_contig2820:185..4986+

>mRNA_H-paniculata_contig2820.7698.1 ID=mRNA_H-paniculata_contig2820.7698.1|Name=mRNA_H-paniculata_contig2820.7698.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1236bp|location=Sequence derived from alignment at H-paniculata_contig2820:185..4986+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTACCGACGGCGCCGTCGGAGATGTTCGCACTATCCACATCACCAGTAG
GGACCCGGCGCCGCCTCCGGTGGCCTACCTGAAGAACAGCGGCGGTATCT
TCATGGACATGACCAGCCACGACTTCGACATGGCCCGCTTCCTCGTTGGC
GACGAGATCGAGGAGGTTACCGACGGCGCCGTCGGAGATGTTCGCACTAT
CCACATCACCAGTAGGGACCCGGCGCCGCCTCCGGTGGCCTACCTGAAGA
ACAGCGGCGGTATCTTCATGGACATGACCAGCCACGACTTCGACATGGCC
CGCTTCCTCGTTGGCGACGAGATCGAGGAGGTGTTCGTGACCGCCACGGC
CTTTGACCCCGAGGCAAAGGAGGCAGACGACTTCGACACGGCCAACACAC
ACCTCAAGTTCAAGGTGTTCGTGACCGCCACGGCCTTTGACCCCGAGGCA
AAGGAGGCAGACGACTTCGACACGGCCAACACACACCTCAAGTTCAAGAA
CGGCGCCTTTGGTATCATCGAGAACTCTCGGCGGTGCTCTTTCGGGTACG
ACCAGAGGGTGGAGGTTTTCGGCTCCGGCGGATCTGTTCAGGGCGCTAAC
CGCATGCCTCAGAGCGTGATGATCAACAATGAGGAAGGGCTCAATGCTGA
ACGGCGCCTTTGGTATCATCGAGAACTCTCGGCGGTGCTCTTTCGGGTAC
GACCAGAGGGTGGAGGTTTTCGGCTCCGGCGGATCTGTTCAGGGCGCTAA
CCGCATGCCTCAGAGCGTGATGATCAACAATGAGGAAGGGCTCAATGCTG
GTCTCCCGTACAGCTTTTTCCTGGACCGGTACGCGGACTCTTACGTGAAC
ATCATGAATGCATTCGTGGAGTACGTGAAGACGGGAGACGAATCGTTGCA
ACCTGCGCTTGGCATGGACGGCAAGATCACTATCTTCATCGGTCTCCCGT
ACAGCTTTTTCCTGGACCGGTACGCGGACTCTTACGTGAACATCATGAAT
GCATTCGTGGAGTACGTGAAGACGGGAGACGAATCGTTGCAACCTGCGCT
TGGCATGGACGGCAAGATCACTATCTTCATCGGTATGGCTGCCGCACGAT
CTGCCAAGGAAGGTCGCTCTGTCAAGATTGCCGAGATCGCAGCCGAGTTC
GGTTGTTAAGTATGGCTGCCGCACGATCTGCCAAGGAAGGTCGCTCTGTC
AAGATTGCCGAGATCGCAGCCGAGTTCGGTTGTTAA
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