prot_H-paniculata_contig1121.769.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1121.769.1
Unique Nameprot_H-paniculata_contig1121.769.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length420
Homology
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BLAST of mRNA_H-paniculata_contig1121.769.1 vs. uniprot
Match: A0A6H5K2S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2S4_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 9.220e-62
Identity = 173/429 (40.33%), Postives = 228/429 (53.15%), Query Frame = 0 
Query:   23 NEKPFKDFSRKKRNIIARSLRASNAADCSRKTSAAL--------------------VPDCLTPRRRRRGQHEH-----ELDLDTMPNLEPYRREVVAQQSTTFGHRPRSASRMFNPSTMATSCGRPAENSESGAMRGGSVECFKGSRAGGKSKKQTASTLLPLGKGSRVHASM-LTAPMLKELLFRDASSVDELARDSSMLYQGRSTATAPASGSHGRSKRELFQLTIGN--ARDATTGITSSVAFANGNDVASATSSAK----KWRSDDPSARGDRGNIDTSWLSSSIQDMNMKNQGGVRNSMMKETTRRDILFPETTSWDGTPAPLPAPKDVRRAVSSLLEPDPDERLRDKLAKSRKLAAGVPVTASSMKHEKECTAMPV--ATAARWGPSPATPRTIIANEEVKRLVEARRERDQVMARRVRRAQF 417
            N+KPF++FSRKKRN++A S+RA++A+D + +++A                      + +     R   G+  H     E+D+DT+P LEPYRREVVAQQ  TFGHRP SASRMFNP TMATSCG P++        GG     +G + GG             G+ S+   +  L+APMLK LL  D  +             G   A    +  H   ++ELF+   GN  +RD+       V     +   S+ +S K    KWRS D   RG+      SWL +S        +  + N+   +   R I   E   WDG PAPLPAP+  RRA+SSLL PDPDERLRDKL KSRK AAGVPVTASS K E+E    P       RW   PATPR +IA +E++RL E R ERD+ MA++VR+A+ 
Sbjct:   56 NKKPFREFSRKKRNLLAWSIRAASASDAAAQSTANKTHMPTRRLSTTVRSDLDGTDIGEFFNMERGMSGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHH--PSTGG----IRGRKKGGGGHXXXX--XXXRGRNSKPRRTTGLSAPMLKALLRGDTPT-------------GEGGAALVTASQH---QQELFEPN-GNIVSRDSAPKPNYLVLDGQEDLTDSSVNSEKLDESKWRSVDDLGRGEALGELESWLQTSSHSGLGHGRRRLGNTKEGQELHR-IFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERERELRPFNPTPIGRWEVCPATPRAVIARQEIRRLSELREERDRAMAKKVRQAEL 458
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1121.769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2S4_9PHAE9.220e-6240.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 390..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1121contigH-paniculata_contig1121:4313..7245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1121.769.1mRNA_H-paniculata_contig1121.769.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1121 4313..7245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1121.769.1 ID=prot_H-paniculata_contig1121.769.1|Name=mRNA_H-paniculata_contig1121.769.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=420bp
QNPSFGQLTSADVPRTASFMIDNEKPFKDFSRKKRNIIARSLRASNAADC
SRKTSAALVPDCLTPRRRRRGQHEHELDLDTMPNLEPYRREVVAQQSTTF
GHRPRSASRMFNPSTMATSCGRPAENSESGAMRGGSVECFKGSRAGGKSK
KQTASTLLPLGKGSRVHASMLTAPMLKELLFRDASSVDELARDSSMLYQG
RSTATAPASGSHGRSKRELFQLTIGNARDATTGITSSVAFANGNDVASAT
SSAKKWRSDDPSARGDRGNIDTSWLSSSIQDMNMKNQGGVRNSMMKETTR
RDILFPETTSWDGTPAPLPAPKDVRRAVSSLLEPDPDERLRDKLAKSRKL
AAGVPVTASSMKHEKECTAMPVATAARWGPSPATPRTIIANEEVKRLVEA
RRERDQVMARRVRRAQFRYL
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