mRNA_H-paniculata_contig2816.7685.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2816.7685.1
Unique NamemRNA_H-paniculata_contig2816.7685.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Match: D7G754_ECTSI (Protein kinase domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G754_ECTSI)

HSP 1 Score: 499 bits (1286), Expect = 1.050e-164
Identity = 344/665 (51.73%), Postives = 425/665 (63.91%), Query Frame = 1
Query:    1 MPPSLSGKVLKKKWHLGELVGSGACAQVYERT-WRDYSIVADDGALVAKVAPLPPKLPPAMSKGRKRKKTDEEKHADMLYYEYTLYNGFLRGHGGVPKIPQGGYGEDQSMRFLIMSRLGPDMEAAQSKNGPWTVARMAGYGRQMLALIRTLHEKCKMVFVDVKPENFMFGLPGSKDGDRIFLIDFGLSERYTTAGGAIRPQKQSAQVAGTPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNG--CLPWSNATSVAHGLVVKKSTSLEDLCAGFPPPLLRYMQSVRGMSYEQVPDYDALDKLLQGVEKEGRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGAAPVNQTENVRAGKGQXXXXXXXXXXGVAVAEVVETVAAPAKRAAGGRAAGRSGAGSHVAEGGSGGDSSPVAKKAGGVVRRATSPSMKLPASLAAMVDGGVSPATRRSPRTKNKXXXXXXXXXXXXXXXXXXXDEEAGFHDAREDDEEEDMEVTEVGKGRSVNRG---RGVAASRRPTRSAAA-----TSAPAGGGAADEGFVLEVITGPHQGQELRLVSGSVNEVRIGRGAPRKRGLRLEEDLEVSERHSVLRPTATGLRCEDVGSLNGTFVNEEKMKGPKILKGGDVLQVGQSAIRI 1962
            M PSL+G VLK KW LG LVGSG CA+VYE    R  S  A DG  VAK+APLP  LPPAM+KGRKRKKT+EEKHADM+YYEYTLY GFL  HGGV +IP GGYGEDQ++R+L+MSRLGPD+EAA  K+  W+VAR AGY RQMLAL+RTLHE C+MVF+DVKPENFMFG+P S D D+IFLIDFGLS RYT   GAI+PQ QSAQ+ GTPEFLSLKCHGGA AGRCDDLES+GYV++AML+ G   LPWS +TSV  GL  KKST+LE++C G P  +L+YM++VRG+ YE+ PDYD+LD +L+ +E  G    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    GA        V  GK  XXXXXXXXXX                                                 G   +RAT+                   A RRS R  +                     +E G  D  E++EEED++VT+V  G + N+G   RG   + + + +AAA     T A A    A+  F+LEV++GPH+G+ LR+ +    EVR+GR APR+ GLRL++D EVS++H++LRP A G+  ED+GSLNG+FVNE++++G  +L+ GDVLQVGQS ++I
Sbjct:    1 MNPSLTGTVLKNKWKLGALVGSGGCAEVYEAIDARAESAGASDGPFVAKIAPLPVGLPPAMTKGRKRKKTEEEKHADMIYYEYTLYKGFLAEHGGVVEIPPGGYGEDQNLRYLVMSRLGPDVEAALKKSEGWSVARKAGYARQMLALLRTLHESCRMVFIDVKPENFMFGVPDSADEDKIFLIDFGLSARYTGPAGAIKPQGQSAQIQGTPEFLSLKCHGGASAGRCDDLESLGYVIVAMLKEGDRALPWSGSTSVKDGLASKKSTTLEEVCEGCPAGMLKYMKAVRGLEYEETPDYDSLDAMLKSMESGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEERDV-------------GAC-------VDDGKXXXXXXXXXXXXXXXXXXXXXX---------------------------------------GSPKQRATT-------------------AVRRSRRLSSPKDGEEFHDAL----------QEHGM-DEGEEEEEEDLQVTKVVNG-AANKGTGRRGTKPTEKLSTAAAAAVKKSTRAKATKAKANGVFLLEVVSGPHEGETLRMKASGA-EVRVGRNAPRRNGLRLDKDFEVSDKHAILRPGADGIGLEDLGSLNGSFVNEDRLEGAAVLQHGDVLQVGQSIVQI 574          
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Match: D7FQK2_ECTSI (Protein kinase domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK2_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 1.310e-120
Identity = 186/312 (59.62%), Postives = 230/312 (73.72%), Query Frame = 1
Query:    1 MPPSLSGKVLKKKWHLGELVGSGACAQVYERTWRDYSIVADDGALVAKVAPLPPKLPPAMSKGRK--RKKTDEEKHADMLYYEYTLYNGFLRGHGGVPKIPQGGYGEDQSMRFLIMSRLGPDMEAAQSKNGPWTVARMAGYGRQMLALIRTLHEKCKMVFVDVKPENFMFGLPGSKDGDRIFLIDFGLSERYTTAGGAIRPQKQSAQVAGTPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNG--CLPWSNATSVAHGLVVKKSTSLEDLCAGFPPPLLRYMQSVRGMSYEQVPDYDALDKLLQGVEKEG 924
            M   L+G VL KKW LG LVGSG CA+VYE         + DG  VAK+AP+P  LP A  KGR   ++KT+EEKHADM++YE+ LY   L  H GV +IP+ GYGEDQ++R+L+M+RLG D+EAA   +  W+VAR  GY RQMLAL+R LHEKC+MVF+DVKPENFMFG+PGS D D+IFLIDFGLS RY    G I+PQ QSAQ+ GT EFLSLKCHGGA AGRCDDLES+GYV+++ML+ G   LPWS ++SV  GL  KKS +LE LC G P  +L YM++VRGM +E+ PDYD LD +L+ +E  G
Sbjct:    1 MASPLTGTVLNKKWKLGALVGSGGCAEVYEAEATGSRGQSADGPFVAKIAPVPVALPLAAKKGRYAYKRKTEEEKHADMIHYEHVLYTASLAKHVGVVEIPRNGYGEDQNLRYLVMTRLGLDVEAALKTSKGWSVARKTGYARQMLALLRALHEKCQMVFIDVKPENFMFGVPGSADEDKIFLIDFGLSTRYVAPRGGIKPQGQSAQIQGTAEFLSLKCHGGASAGRCDDLESLGYVIVSMLKEGDRALPWSGSSSVKDGLAAKKSATLEALCRGCPAGMLEYMKAVRGMEFEEAPDYDKLDAVLKSMESAG 312          
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Match: G5AB04_PHYSP (Protein kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AB04_PHYSP)

HSP 1 Score: 227 bits (578), Expect = 1.560e-62
Identity = 127/285 (44.56%), Postives = 178/285 (62.46%), Query Frame = 1
Query:   34 KKWHLGELVGSGACAQVYERTWRDYSIVADDGA-LVAKVAPLPPKLPPAMSKGRKRKKTDEEKHADMLYYEYTLYNGFLRGHGGVPKIPQGGYGEDQSMRFLIMSRLGPDMEAAQSKNGPWTVARMAGYGRQMLALIRTLHEKCKMVFVDVKPENFMFGLPGSKDGDRIFLIDFGLSERYTTAGGAIRPQKQSAQVAGTPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNGCLPWSNATSVAHGLVVKKSTSLEDLCAGFPPPLLRYMQSVRGMSYEQVPDYD 885
            K W LG+ +GSGAC+ VY       S+ +D G  LV K++PLP +LP A  K +KRKKT  E++AD LY E+ LY   LR   G+P +P G YGED+  RFL++ RLG  +E    + GP   A  A  G+++L  ++ +H K  +++VDVKPENFM  L   K+ D ++ +DFG+S+RY  A G  +  K+   V GTP FLSL CH GA + R DD+ES+ YVL+ ++R G LPW  A+S A G  +KKSTS++ LCA  P      ++++R   +E  PDYD
Sbjct:    7 KTWRLGKKLGSGACSDVYA-VESVSSLGSDAGRELVMKLSPLP-QLPAAKLKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPVPSATAARLGQEILDTLQQMHVK-NILYVDVKPENFM--LDTDKE-DTVYCVDFGISDRYVAATGKHKDYKEGT-VVGTPTFLSLNCHNGATSSRRDDIESLLYVLIYLMR-GDLPWQQASSDAEGAKIKKSTSVDQLCASLPREWAAMLKNIRECGFEDRPDYD 283          
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Match: D0N9V7_PHYIT (Casein kinase I, putative n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0N9V7_PHYIT)

HSP 1 Score: 225 bits (574), Expect = 5.420e-62
Identity = 123/286 (43.01%), Postives = 177/286 (61.89%), Query Frame = 1
Query:   34 KKWHLGELVGSGACAQVYERTWRDYSIVADDGA--LVAKVAPLPPKLPPAMSKGRKRKKTDEEKHADMLYYEYTLYNGFLRGHGGVPKIPQGGYGEDQSMRFLIMSRLGPDMEAAQSKNGPWTVARMAGYGRQMLALIRTLHEKCKMVFVDVKPENFMFGLPGSKDGDRIFLIDFGLSERYTTAGGAIRPQKQSAQVAGTPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNGCLPWSNATSVAHGLVVKKSTSLEDLCAGFPPPLLRYMQSVRGMSYEQVPDYD 885
            K W LG+ +GSGAC+ VY       S ++ D     V K++PLP +LP A  K +KRKKT  E++AD LY E+ LY   LR   G+P +P G YGED+  RFL++ RLG  +E    + GP + A  A  G+++L  ++ +H K  +++VDVKPENFM  +   +  + ++ +DFG+S+RY TA G  +  K+   V GTP FLS+ CH GA + R DD+ES+ YVL+ ++R G LPW  A+S A G  +KKSTS+E LCA  P      ++++R   +E  PDYD
Sbjct:    7 KSWRLGKKLGSGACSDVY--AVEPMSPLSRDAGREFVMKLSPLP-QLPAAKLKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPVSSATAARLGQEILETLQQMHVK-NILYVDVKPENFMLDM---RSENTVYCVDFGISDRYVTATGKHKEYKEGT-VVGTPTFLSINCHDGATSSRRDDIESLLYVLVYLMR-GNLPWQKASSDAEGAKIKKSTSVEQLCASLPNAWGAMLKNIRYCGFEDRPDYD 283          
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Match: W7TN39_9STRA (Casein kinase n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN39_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.140e-61
Identity = 135/318 (42.45%), Postives = 192/318 (60.38%), Query Frame = 1
Query:   19 GKVLKKKWHLGELVGSGACAQVYERTWRDYSIVADDGALVAKVAPLPPKLPPAMSKGRKRKKTDE--EKHADMLYYEYTLYNGFLRGHGGVPKIPQG-GYGEDQSMRFLIMSRLGPDM-EAAQSKNGPWTVARMAGYGRQMLALIRTLHEKCKMVFVDVKPENFMFGLPGSKDGDRIFLIDFGLSERYTTAGGAIRPQKQSAQVAG---TPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNGCLPWSNATSVAHGLVVKKSTSLEDLCAGFPPP--LLRYMQSVRGMSYEQVPDYDA----LDKLLQGVEKEGRGG 933
            G +L+ +W LG L+G GAC QV+     D +   ++   V K+APLPP  P A    RK+ K DE  +++AD LY E  +Y  +L G   VP +P    YGED+  RFL+M RLG D+ +  +S+   ++ A +A YG+QML  I+ +HE+ +++F+DVKPENFM GLPG++   R+FL+D GL E+YT + G  +PQ+      G   TP F SL CH G  AGR DDLE++G+VLL   R G LPW++ATS +  L +K+S  ++DL  G      L ++++  R  +YE  P Y A    LDKL    E  G+GG
Sbjct:   25 GLILRGRWKLGRLLGEGACGQVF--AVEDVTGAQNEQEWVIKLAPLPP--PAAAGVARKKNKKDESLKRNADTLYMEQLVYKNYLMGVPHVPALPALLSYGEDKGFRFLVMQRLGQDLSQLFESQGRYFSPATLADYGKQMLDGIQQMHER-QLLFIDVKPENFMLGLPGTRASKRVFLVDLGLVEKYTGSNGVHKPQEGQGAAGGGVGTPLFSSLACHEGRPAGRRDDLEALGWVLLYFARGGVLPWASATSDSECLKMKRSALVKDLSRGVVGGDLLAQFLEMARKTAYEAAPKYAAFAGLLDKLGGVKEAGGKGG 337          
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Match: W2FLA2_PHYPR (CK1/CK1 protein kinase n=11 Tax=Phytophthora TaxID=4783 RepID=W2FLA2_PHYPR)

HSP 1 Score: 223 bits (569), Expect = 2.740e-61
Identity = 122/286 (42.66%), Postives = 174/286 (60.84%), Query Frame = 1
Query:   34 KKWHLGELVGSGACAQVYERTWRDYSIVADDGA--LVAKVAPLPPKLPPAMSKGRKRKKTDEEKHADMLYYEYTLYNGFLRGHGGVPKIPQGGYGEDQSMRFLIMSRLGPDMEAAQSKNGPWTVARMAGYGRQMLALIRTLHEKCKMVFVDVKPENFMFGLPGSKDGDRIFLIDFGLSERYTTAGGAIRPQKQSAQVAGTPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNGCLPWSNATSVAHGLVVKKSTSLEDLCAGFPPPLLRYMQSVRGMSYEQVPDYD 885
            K W LG+ +GSGAC+ VY       + +  D     V K++PLP +LP A  K +KRKKT  E++AD LY E+ LY   LR   G+P +P GGYGED+  R+L++ RLG  +E    + GP   A  A  G ++L  ++ +H K  +++VDVKPENFM     +   ++++ +DFG+S+RY TA G  +  K+   V GTP FLSL CH GA + R DD+ES+ YVL+ ++R G LPW  A+S A G  +KK+TS+E LCA  P      ++ +R   +E  PDYD
Sbjct:    7 KTWRLGKKLGSGACSDVY--AVESVNPLGSDAGRDFVMKLSPLP-QLPAAKLKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGGYGEDKGYRYLVIERLGRTLETVLMEQGPVPSATAARLGLEILETLQQMHVK-NILYVDVKPENFMLD---THRENKVYCVDFGISDRYVTATGKHKDYKEGT-VVGTPTFLSLSCHNGATSSRRDDIESLLYVLIYLMR-GDLPWQQASSDAEGAKIKKTTSVEHLCASLPSEWSTMLKQIRECGFEDRPDYD 283          
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Match: A0A329RNY3_9STRA (Protein kinase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RNY3_9STRA)

HSP 1 Score: 221 bits (563), Expect = 1.670e-60
Identity = 122/285 (42.81%), Postives = 177/285 (62.11%), Query Frame = 1
Query:   34 KKWHLGELVGSGACAQVYERTWRDYSIVADDGA-LVAKVAPLPPKLPPAMSKGRKRKKTDEEKHADMLYYEYTLYNGFLRGHGGVPKIPQGGYGEDQSMRFLIMSRLGPDMEAAQSKNGPWTVARMAGYGRQMLALIRTLHEKCKMVFVDVKPENFMFGLPGSKDGDRIFLIDFGLSERYTTAGGAIRPQKQSAQVAGTPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNGCLPWSNATSVAHGLVVKKSTSLEDLCAGFPPPLLRYMQSVRGMSYEQVPDYD 885
            K W LG+ +GSGAC+ VY     +  + +D G   V K++PLP +LP +  K +KRKKT  E++AD LY E+ LY   LR   G+P +P G YGED+  RFL++ RLG  +E    + GP   A  A  G+++L  ++ +H K  +++VDVKPENFM  L   K+ ++++ +DFG+S+RY TA G  +  K+   V GTP FLS+ CH GA + R DD+ES+ YVL+ ++R G LPW  A+S A G  +KK TS++ LCA  P      ++ +R   +E  PDYD
Sbjct:    7 KTWRLGKKLGSGACSDVYA-VESESPLGSDAGREFVMKLSPLP-QLPASKLKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPVPSATAARLGQEILETLQQMHVK-NILYVDVKPENFM--LDTHKE-NKVYCVDFGISDRYVTATGKHKDYKEGT-VVGTPTFLSMNCHNGATSSRRDDIESLLYVLIYLMR-GDLPWQQASSDAEGAKIKKVTSVDQLCASVPSEWGAMLEHIRDCGFEDRPDYD 283          
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Match: K3X2I7_GLOUD (Protein kinase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2I7_GLOUD)

HSP 1 Score: 219 bits (557), Expect = 9.450e-60
Identity = 118/291 (40.55%), Postives = 171/291 (58.76%), Query Frame = 1
Query:   34 KKWHLGELVGSGACAQVYERTWRDYSIVADDGALVAKVAPLPPKLPPAMSKGRKRKKTDEEKHADMLYYEYTLYNGFLRGHGGVPKIPQGGYGEDQSMRFLIMSRLGPDMEAAQSKNGPWTVARMAGYGRQMLALIRTLHEKCKMVFVDVKPENFMFGLPGSKDGDR---IFLIDFGLSERYTTAGGAIRPQKQSAQVAGTPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNGCLPWSNATSVAHGLVVKKSTSLEDLCAGFPPPLLRYMQSVRGMSYEQVPDYDALDK 897
            K W LG+ +GSGAC+ VY          +     V KV+P+P ++PP+ +K +KRKKT  E++AD LY E+ LY  +LR H  VPKIP G YGED+  RFL++ RLG  +E    + GP   A  A  G +++  ++ +H    +++VDVKPENFM       D DR   I+++DFG+S+RY  A G  +  K    + GTP FLSL CH GA   R DD+E++ +VLL ++  G LPW   +S A G  +KK+TS++ LC   P      ++ +R   +++ PDYD   K
Sbjct:    7 KNWRLGKKIGSGACSDVYAVEPIKPISASKGTQFVMKVSPIP-EIPPSKAKNKKRKKTPAERNADALYAEHLLYQSYLRDHPRVPKIPDGAYGEDKGYRFLVLERLGRTLETVLQEEGPIPSATAARLGLELMDTLKHMHVN-NIIYVDVKPENFML------DADRESKIYVVDFGISDRYVMATGKHKEHKMG-NIVGTPTFLSLNCHIGATPSRRDDIEALLHVLLYLML-GSLPWQKVSSDAEGAKLKKATSVDQLCQTLPQEWKLMLEKIRACKFDEKPDYDFFTK 287          
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Match: A0A225X386_9STRA (Casein kinase I n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X386_9STRA)

HSP 1 Score: 217 bits (553), Expect = 4.800e-59
Identity = 121/292 (41.44%), Postives = 179/292 (61.30%), Query Frame = 1
Query:   13 LSGKVLKKKWHLGELVGSGACAQVYERTWRDYSIVADDGA-LVAKVAPLPPKLPPAMSKGRKRKKTDEEKHADMLYYEYTLYNGFLRGHGGVPKIPQGGYGEDQSMRFLIMSRLGPDMEAAQSKNGPWTVARMAGYGRQMLALIRTLHEKCKMVFVDVKPENFMFGLPGSKDGDRIFLIDFGLSERYTTAGGAIRPQKQSAQVAGTPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNGCLPWSNATSVAHGLVVKKSTSLEDLCAGFPPPLLRYMQSVRGMSYEQVPDYD 885
            + G +LK  W LG+ +GSGAC+ VY     +  + +D+G   V K++PLP +LP A  K +KRKKT  E++AD LY E+ LY   LR   G+P +P G YGED+  RFL++ RLG  +E    + GP      A  G+++L  ++ +H K  +++VDVKPENFM  L   K+ ++++ +DFG+S+RY TA G  +  K+   V GTP FLSL CH GA + R DD+ES+ YVL+ ++R G LPW  A+S + G  +K + S++ LC   P      ++ +R   +E  PDYD
Sbjct:    1 MEGTMLKT-WRLGKKLGSGACSDVYAVESVN-PLGSDEGRQFVLKLSPLP-QLPAAKLKNKKRKKTPAERNADALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPTPSRTAARLGQEILETLQQMHVK-NILYVDVKPENFM--LDTGKE-NKVYCVDFGISDRYVTATGKHKDYKEGT-VVGTPTFLSLNCHNGATSSRRDDIESLLYVLIYLMR-GDLPWQQASSDSEGAKIKTAISVDQLCTSLPQEWAAMLKKIRACDFEDRPDYD 283          
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Match: A0A2P4YB84_9STRA (Casein Kinase I n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YB84_9STRA)

HSP 1 Score: 217 bits (553), Expect = 5.450e-59
Identity = 119/285 (41.75%), Postives = 174/285 (61.05%), Query Frame = 1
Query:   34 KKWHLGELVGSGACAQVYERTWRDYSIVADDGA-LVAKVAPLPPKLPPAMSKGRKRKKTDEEKHADMLYYEYTLYNGFLRGHGGVPKIPQGGYGEDQSMRFLIMSRLGPDMEAAQSKNGPWTVARMAGYGRQMLALIRTLHEKCKMVFVDVKPENFMFGLPGSKDGDRIFLIDFGLSERYTTAGGAIRPQKQSAQVAGTPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNGCLPWSNATSVAHGLVVKKSTSLEDLCAGFPPPLLRYMQSVRGMSYEQVPDYD 885
            K W LG+ +GSGAC+ VY       S+  D G   V K++PLP +LP A  K +KRKKT  E++ D LY E+ LY   LR   G+P +P G YGED+  RFL++ RLG  +E    + GP      A  G+++L  ++ +H K  +++VDVKPENFM  L   K+ ++++ +DFG+S+RY TA G  +  K+   V GTP FLS+ CH GA + R DD+ES+ YVL+ +++ G LPW  A+S + G  +K +TS++ LCA  P      ++ +R   +E  PDYD
Sbjct:    7 KTWRLGKKLGSGACSDVYA-VESVSSLGTDAGREFVMKLSPLP-QLPAAKLKNKKRKKTPAERNVDALYAEHLLYKNHLRDQPGIPYVPMGAYGEDKGYRFLVIERLGRTLETVLQEQGPIPSRTAARLGQEILETLQQMHVK-NILYVDVKPENFM--LDTDKE-NKVYCVDFGISDRYVTATGKHKDYKEGT-VVGTPTFLSMNCHNGATSSRRDDIESLLYVLIYLMKGG-LPWQQASSDSEGAKIKSATSVDQLCASLPQVWGSMLKKIRACDFEDRPDYD 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2816.7685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G754_ECTSI1.050e-16451.73Protein kinase domain containing protein n=2 Tax=E... [more]
D7FQK2_ECTSI1.310e-12059.62Protein kinase domain containing protein n=1 Tax=E... [more]
G5AB04_PHYSP1.560e-6244.56Protein kinase domain-containing protein n=1 Tax=P... [more]
D0N9V7_PHYIT5.420e-6243.01Casein kinase I, putative n=3 Tax=Phytophthora inf... [more]
W7TN39_9STRA2.140e-6142.45Casein kinase n=3 Tax=Nannochloropsis gaditana Tax... [more]
W2FLA2_PHYPR2.740e-6142.66CK1/CK1 protein kinase n=11 Tax=Phytophthora TaxID... [more]
A0A329RNY3_9STRA1.670e-6042.81Protein kinase domain-containing protein n=2 Tax=P... [more]
K3X2I7_GLOUD9.450e-6040.55Protein kinase domain-containing protein n=1 Tax=G... [more]
A0A225X386_9STRA4.800e-5941.44Casein kinase I n=1 Tax=Phytophthora megakarya Tax... [more]
A0A2P4YB84_9STRA5.450e-5941.75Casein Kinase I n=2 Tax=Phytophthora palmivora var... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2816contigH-paniculata_contig2816:8288..19427 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score501.1
Seed ortholog evalue7.7e-139
Seed eggNOG ortholog2880.D7G754
KEGG koko:K02218
KEGG Pathwayko04011,ko04392,map04011,map04392
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptidyl-serine phosphorylation
EggNOG OGsKOG1164@1,KOG1165@2759
EC2.7.11.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons9
Model size2532
Cds size1980
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2816.7685.1prot_H-paniculata_contig2816.7685.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2816 8288..18875 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929854.1009493-CDS-H-paniculata_contig2816:8287..83771622929854.1009493-CDS-H-paniculata_contig2816:8287..8377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 8288..8377 +
1691481040.7594001-CDS-H-paniculata_contig2816:8287..83771691481040.7594001-CDS-H-paniculata_contig2816:8287..8377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 8288..8377 +
1622929854.113335-CDS-H-paniculata_contig2816:8706..89071622929854.113335-CDS-H-paniculata_contig2816:8706..8907Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 8707..8907 +
1691481040.7704906-CDS-H-paniculata_contig2816:8706..89071691481040.7704906-CDS-H-paniculata_contig2816:8706..8907Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 8707..8907 +
1622929854.1243021-CDS-H-paniculata_contig2816:10894..110931622929854.1243021-CDS-H-paniculata_contig2816:10894..11093Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 10895..11093 +
1691481040.781047-CDS-H-paniculata_contig2816:10894..110931691481040.781047-CDS-H-paniculata_contig2816:10894..11093Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 10895..11093 +
1622929854.1356869-CDS-H-paniculata_contig2816:11593..116691622929854.1356869-CDS-H-paniculata_contig2816:11593..11669Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 11594..11669 +
1691481040.7918978-CDS-H-paniculata_contig2816:11593..116691691481040.7918978-CDS-H-paniculata_contig2816:11593..11669Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 11594..11669 +
1622929854.1499102-CDS-H-paniculata_contig2816:12238..123461622929854.1499102-CDS-H-paniculata_contig2816:12238..12346Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 12239..12346 +
1691481040.8007898-CDS-H-paniculata_contig2816:12238..123461691481040.8007898-CDS-H-paniculata_contig2816:12238..12346Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 12239..12346 +
1622929854.1656837-CDS-H-paniculata_contig2816:13164..138011622929854.1656837-CDS-H-paniculata_contig2816:13164..13801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 13165..13801 +
1691481040.809453-CDS-H-paniculata_contig2816:13164..138011691481040.809453-CDS-H-paniculata_contig2816:13164..13801Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 13165..13801 +
1622929854.187002-CDS-H-paniculata_contig2816:14590..149591622929854.187002-CDS-H-paniculata_contig2816:14590..14959Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 14591..14959 +
1691481040.8182135-CDS-H-paniculata_contig2816:14590..149591691481040.8182135-CDS-H-paniculata_contig2816:14590..14959Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 14591..14959 +
1622929854.2112494-CDS-H-paniculata_contig2816:16359..164901622929854.2112494-CDS-H-paniculata_contig2816:16359..16490Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 16360..16490 +
1691481040.828681-CDS-H-paniculata_contig2816:16359..164901691481040.828681-CDS-H-paniculata_contig2816:16359..16490Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 16360..16490 +
1622929854.2313306-CDS-H-paniculata_contig2816:18706..188751622929854.2313306-CDS-H-paniculata_contig2816:18706..18875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 18707..18875 +
1691481040.8383467-CDS-H-paniculata_contig2816:18706..188751691481040.8383467-CDS-H-paniculata_contig2816:18706..18875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2816 18707..18875 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929854.251936-UTR-H-paniculata_contig2816:18875..194271622929854.251936-UTR-H-paniculata_contig2816:18875..19427Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2816 18876..19427 +
1691481040.8482735-UTR-H-paniculata_contig2816:18875..194271691481040.8482735-UTR-H-paniculata_contig2816:18875..19427Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2816 18876..19427 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2816.7685.1

>prot_H-paniculata_contig2816.7685.1 ID=prot_H-paniculata_contig2816.7685.1|Name=mRNA_H-paniculata_contig2816.7685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=660bp
MPPSLSGKVLKKKWHLGELVGSGACAQVYERTWRDYSIVADDGALVAKVA
PLPPKLPPAMSKGRKRKKTDEEKHADMLYYEYTLYNGFLRGHGGVPKIPQ
GGYGEDQSMRFLIMSRLGPDMEAAQSKNGPWTVARMAGYGRQMLALIRTL
HEKCKMVFVDVKPENFMFGLPGSKDGDRIFLIDFGLSERYTTAGGAIRPQ
KQSAQVAGTPEFLSLKCHGGAGAGRCDDLESVGYVLLAMLRNGCLPWSNA
TSVAHGLVVKKSTSLEDLCAGFPPPLLRYMQSVRGMSYEQVPDYDALDKL
LQGVEKEGRGGKGTAAPAPAPAKTKIGEGAATAVSRRVAARTGAGGTSNC
NATAAAATVVASGAAPVNQTENVRAGKGQKGKAKSRAAAGVAVAEVVETV
AAPAKRAAGGRAAGRSGAGSHVAEGGSGGDSSPVAKKAGGVVRRATSPSM
KLPASLAAMVDGGVSPATRRSPRTKNKSPQDKKREEMEEPSEELDEDEEA
GFHDAREDDEEEDMEVTEVGKGRSVNRGRGVAASRRPTRSAAATSAPAGG
GAADEGFVLEVITGPHQGQELRLVSGSVNEVRIGRGAPRKRGLRLEEDLE
VSERHSVLRPTATGLRCEDVGSLNGTFVNEEKMKGPKILKGGDVLQVGQS
AIRIRVCSD*
back to top

mRNA from alignment at H-paniculata_contig2816:8288..19427+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2816.7685.1 ID=mRNA_H-paniculata_contig2816.7685.1|Name=mRNA_H-paniculata_contig2816.7685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11140bp|location=Sequence derived from alignment at H-paniculata_contig2816:8288..19427+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTCCTTCCCTGAGTGGAAAGGTTCTCAAGAAGAAATGGCACTTGGG CGAGCTTGTAGGCTCAGGCGCGTGTGCCCAAGTGTACGAAGTGACTGACC CGAGCAAGACAGGTGGGTCTGCACTAGTGTTCGTTGGAAAATTAGGGATT TGGCAGTTGACGTACACTGTACATCCATCCCCCTGTCCAACAGGAGCACT GCTGTACTGAACACCACTGTAGCAACGTCGCGTCTTGTCGCTTAGCCCTG TGCAATGCAGGTCCTTTTATGCGAGGCGCATTGGCGCATATGCCTACTAT GTATTATATGTGTTGGCTGTACCCATCCAAAATTTTGCTGTCGCACAGCA GATAAGCTACGATCTGCAGCCGTCACAATATTATGACAACTGCATGATTT TTCCTTGTTTGAAATATAGCGAACATGGCGCGATTATTCGATTGTTGCAG ACGATGGTGCTCTGGTCGCCAAAGTGGCGCCTCTGCCACCGAAGTTACCT CCGGCTATGAGCAAAGGCAGGAAGAGAAAAAAGACAGATGAGGAGAAGCA CGCGGACATGCTTTACTACGAGTACACTCTGTACAATGGCTTCCTCCGTG GCCATGGGGGGGTGCCTAAGGTAAACTAACTACTGAATTACTGACAGTAG TTCAATGAAGTTGGAACATTTCAACAACGTGTCCGAAACTGTCTTAAATG AGGAAGGGTGTGCTGTGCCTGAGAGATTAGGAAAAAATGCGCACGGCAGA GGTGGATCTGTAGATTATAGGCAATGTGTGAAATATCAACCGGCTCCACA CCGCAGTAGATTACAAGGGGTAAAGAGAAATGTAAGATTGCTCGAATACA GTATTTGTAGTCAGTACTCGTACAATGATTGTCGTAGACATCTCAGAACA GTTTTGACACATAATTCAAGCGATTTTTAGACATTGTCACATGAGTCATG GGAGTATTTTTTCTTTGTTCTAGGAGCTGCCTGACAGAAACGCTGCGAGT TTAGTGGGCCGTTGCGAGCTTGGCGAGCCATTGGGGGTTGGTCATGGGTT TGGGGGATTGACTTAATGGGTACGAGGGCACGATACCAGACCATGACTGG ACGGTTGACTTCGTTTCTGTAATGTTTCTATTCAAGTATGCAACATTCAT ATTTTGTTGACTGTTCTGCTCGGTCATGTTTCGCCGATTTGTGCACCGGA GGATGGTTCTAATGGTATCCCCGCTATCGTGCAAGTAGGCGTTATTCTTG GTGCGAAAATGAAACGGTAACTTTTCGCGTGCCCACGTATGTCCATACAG ACCGCTTTCGTGATCAAAGGGTTGAACTGCCTGAGCACACGGCCATAACC ACAATTACATTTTCTCCTCGCTGCGTTGTTTATCATGGTTATGTTGGCCA CAACGGCTACCAAACCTTTTTTTAGAGCGATAATCTTGTCGTAGCGTACC ACTGCGCGGGCGGGTATAACTACGGAAGATGTCTGGCTTTTAATTGTGCT TTACAGAACAGTACAGTAGTTGGTACTGACTATCTAGTGCGATCGACTCG AGTTTTCCAGGAGTGTTCTCGGTTTTGCGCGGTGCTTGCCAGGAATTTAT GAAACCGCCCTCGAAAGGGGCACTGTTGAGAAAAACATGGTTCTAATAAT AGGAGTACCACAATAAAGAGACAAACCGTGTGAACATCATCTAGGCGTTA GTTTTCCAACCTCGATGTGGATACGCTGCTATCGCCACGGTCATTTTTCA CGGTATTCAGAAATCAATTTGCCGGGGTAAGGTACCGTGCACAGTATTTT GAGGATAACATGAACTCTTGAAGTCCGCCAAAACTAACGACGGGATATCG TTCCTACAGAATGTGTCTTTATTGCAGCACTTGTAAACCGTTTTTTTCTC GGTCATTCTCCTGTCGTACCTGGTTTCACAAGTTCCGAAAAATGTACCGT GCAATACCAAGAACACCCCTTGAATTTTCCCTCACCTGCCAGCGTCTTTC ACCTTGTCTTTGTGGCCACAACATTTAACTTCATTAGTCATCAGTCATTA TTCATGCTTGGACCAAGGAAGCGCGTGGACAGGGGGCAGTGTGCGCGACA CGCAATTAAAAGAAAATCACATTTAAGCTCAGTCTCCAACCTCAAGTTCT CACCCTCAGCGTGACTCATTCGGAATCTACACTCAATCAGAGATAAGGAC CAAAAGTGGATTATGACTAAGTTGCGCTGAAAGCATTAAAAGCAATGGCA CATCGGCTAATCTCTCCGATGGCATATATACGAGTATTTAATGGCAACAA GCCCCCACCGCGCGCCCCATGGAGTTCGAAAACTGCTTCTCAGTATGTGG TGTATATAGCCATGGTTATCACCTAAGCAACATTACGATGCTTTAAAAAT ATTTTATCTACGTCTCTTGAGTCTTGTAAAGTTTGCGATTCTTTGAAATT GTATCAGATGTGTCTACTGTTGCACTTGAGCTCAACGGTGATACATGGAC ACGAGTGTTCATGATCCTTCCTATGACATACCATACTGTACCTATGTACG CCCCCCTCCCTCGCTCCCTCCCTTCCCTAAAACATAAAACATTTTCGATC TTGGCAGATTCCGCAGGGGGGCTATGGCGAAGACCAAAGCATGCGGTTCC TCATCATGAGCAGGCTCGGGCCGGACATGGAAGCTGCGCAGTCAAAGAAC GGTCCTTGGACCGTTGCGCGAATGGCGGGATACGGGCGGCAAATGCTGGC CCTCATCCGAACTCTCCACGAAAAGTGCAAGATGGTCTTCGTGGACGTCA AGCCTGGTGAGGGGAAAAAGGAATGAAGGCTTTTCAGTGAGAGCTGTAAT TGGTGAGAGAGATATGTGTACAGAAGTACCCCAAACGTTGTCGTATGGGT TTGTATATATATATATATATATATATATTAATAAAATGTTTGTGTATGTA TCATTAGTGTGTCCTGGAAAAAAACGGCAATTATCTTGACTTCTTCCGTT GTCTATCTTCAAGTACTTGTATATGGTTCTTGATGATATCGCTCTTTGTG GTTGGTGCTGATTTTACGGCACGTCATGATTTGGCAGTCTACAATCACCA ACCAAGCTTTTGGTTATTTCACAGCGTGTGGGGGGGGGGGCGAACAGCAA AATTAGATCGATAAGGGGCGGTCATGCAGCTGGTGAACGCGCGCAGCATG TACATCCAAAGCAATGCTGTGCATTCTGTTGCTTGCATCGCGGGACCCGA GACCCGACATGCGCCACGCTCGCTGCGCTGCTCTGCGCTGGTTGGTGTTC GGTCAGAAAACTTCATGTTCGGGCTTCCCGGCTCTAAAGACGGGGATAGG ATCTTTCTCATTGACTTCGGTCTCAGCGAGAGGTAAGTGGTCGGTCCATA AACTAGGGATTCCTTCTTCTTTTGTGTTGATATGTGCATTACTGCTCGTA CCTAGTATTGTGCAATGTTAGCGAAATACAATGGTTTTTATTGTCTTTGT TTTTCGTCTGTGCACACCTAGAACTGCGCTTCTTAGCTCGTGTCTTGTAT TGTATTGGTGAAGCAACAACAACGAAAAAAAGGACGAAATCAATAATGAA AATTCAAGGCCCTTATGGCGGCCTCTGTGGCTGGCCAGCGCAAGTTCGAC CACCCTGGAGGAGGGCGACAGAGGGCTACTACCGTAAGGTATTTTTTTTT TCTATTTTTTTCTTGATGAATAAGACACCCCAAACTCTTCACATCTCCCC GTTGCCCCGATGTAACGGACGCACCTGTATATTAGTTGCATGTGGAGCCT GATACGGTAGGTGTGTGCAAAACATGCACGGAGCATCCAAAGTCCGGGCT TTACACGTGGAAATGCCACCAAATGTGGGCTGCATATCCCGTATTGCAAT CTCTCTTAGAGTGCACATTTTTTTCTTGCTTTGATGTGTTTTCCCGGCCA GATACACGACTGCGGGAGGAGCTATCAGGCCTCAGAAGCAAAGTGCACAG GTGGCAGGGACTCCAGAGTTTTTGTCTCTTAAGTGTCACGGAGGCGCTGG TGCGGGAAGGTATGCTGACAAACACGAAAAAGAGTTGTGAGCTACCACGC GCGCGATATTTGACATCAAGGCCCAAAGGGTCATAACCCAATACAGTAGT AAAGTACAGGTGACGGTGTCTTTTTTCTGTTTTGTTACTGTATTGTGGAA ATTGTGCGAAATATGTTTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTAT GGTTGCGACTACTGCGGCGAATTTTGAATTTCGAGGTTTTGGGGTATCTT TTACGTCATCCCCACGGACTGTGTAGGTTCGACCCAAACCCTGAACCCGA TCGAGCCTAAGGGGTCCATGTGATGATGTAGCGCTTTGTAAAACTAATTT CATGCTGTTCCGAGTGTTTCTGTCATTATCTTTTGTATTCCGCTTTCGCT CAAGATCGTTCGCTGCAAGCAGAAAGGTTGGCACATAATAATCTAATTCT CCGGTGAAGGAGTAAAATCAAACGAACCGCCTGCTTTAAACTCAAGGAAG CACACGACCCCCCATAAAAATGATCGGCAAGGCAAGCCAGCGAATAACCC ATCGCTGTATTACGGATAGACGATGTAGCAGTCGACGAACCTAGGTGAGG TAAGATTACACAAAAAACGAATTTCGTAATCTGTATATATATTGAAGACA GACGGTTACTGTAGACGATACTTGTAGTCAACAATAGGTCCCTTCATTTG CCAAGCTATAATTTCTATACACACGAACAGAATAAACGGTATCAAGTGTC AGCTCCGTAAATGCTGCCTTAAAACTCGACCCCCGTCCCCTCCCCTTCCA TGGCCTCTCTTATCTCGAAAATCCTAGGTGCGACGACCTCGAGTCGGTCG GCTACGTACTACTGGCTATGCTACGAAACGGCTGCCTCCCCTGGAGCAAC GCCACCAGCGTTGCCCACGGGCTTGTCGTAAAAAAATCCACGTCCCTCGA GGACCTCTGCGCCGGCTTCCCGCCACCGCTCCTCCGCTACATGCAGAGTG TCCGTGGCATGTCATACGAACAAGTCCCGGACTACGACGCTTTAGACAAG CTGCTCCAGGGGGTGGAGAAGGAAGGACGGGGTGGGAAGGGTACAGCAGC GCCGGCGCCGGCGCCGGCGAAAACAAAGATAGGGGAAGGTGCTGCTACCG CCGTCAGTCGACGGGTAGCCGCCCGCACAGGGGCGGGAGGGACTAGCAAT TGCAATGCTACTGCTGCGGCGGCGACTGTGGTGGCGTCGGGGGCTGCTCC TGTGAATCAGACAGAAAATGTCCGCGCGGGCAAGGGTCAGAAGGGAAAAG CCAAGTCTCGTGCAGCAGCAGGGGTCGCGGTGGCGGAGGTGGTCGAGACG GTGGCTGCGCCAGCGAAGCGTGCTGCTGGGGGGCGAGCAGCCGGGCGCAG CGGGGCGGGCAGTCATGTTGCTGAGGGCGGCAGTGGCGGTGATTCCTCGC CAGTTGCTAAGAAGGTAGGTTTTCGGAAAATGACTTGTTCGCATTTTCGG GCGGAACGCTGGTCTCGCCGATCTTTGCCTCCATGCAGGTGATCCATGCT AAGCTGGTTGAGCAGGCACCGCCGGTGGGTCTGTCTCGTCTGTGGCTATC CGGCCGGATGGCGGTAGATATGTCGGTGGACAGGTGTAAACTAAAGCTCT GTTTTTTTGGAGGGGAGGGAGGAGAAGAGGGGGAGGGGAGGGGAGCCAGA ACGTGGCGTACTGATTTTATTATCGGCATATGGTTGTCGTTAGCTGGGGA AGTTGGTTGTCGTTCTAGTGTCATCGGTTGCTGGATAAACCGTGTCGGTC ATGGTTGTGCCTATCCTTCTTTTTCGCCTTCCGGGGGTTAAAAAAAAAAA AAAATCCTTCTTTTTCGTCCAGGGTATAGGCGAATCTTCCTAAATGCTAA CGAAGATTAAGTCGTTACTGTTTCCATACTCCATACTTGTTGTCTGTGGG CGGTCCTTCCTTTGACAATTGCGCCGTAACTAATCTGGAAATCTCTCTGC CCCTCTCCATTGATACGGCACGTAATCTCATTGGCAACCCCCCGCAAACC TTGGTGACGCGGTTCTTACATCTGGGGCTATACTTTTGTACTGTAATCAC TTGTTCTCTACATTGGCCTGATGTTTCCCTTTTGCAGAAGTTTCTTCCGT TCTCATTATCCCCCCCCTTTCCTTTCTCTGCCCTACTGTAATCTTTTTTT TTGCGGGTTTTATCACATGCACCAAACCTTCGTCGGTGAACGTAAAACAG CAGGCAGGGGGGGTGGTTAGACGAGCCACGTCCCCCTCGATGAAACTACC TGCCTCTCTGGCCGCTATGGTCGATGGTGGAGTTTCACCCGCAACTCGCC GCAGCCCTCGCACCAAGAACAAGTCCCCGCAAGACAAAAAGAGGGAGGAA ATGGAAGAACCGTCCGAAGAGCTGGACGAGGATGAAGAGGCGGGCTTCCA CGACGCGCGTGAGGATGATGAGGAAGAGGACATGGAAGTCACCGAGGTTG GGAAGGGAAGAAGCGTAAATAGGGGGCGGGGGGTTGCGGCATCTCGACGG CCAACAAGAAGTGCTGCCGCTACTTCTGCTCCGGCTGGTGGTGGTGCAGC AGATGAAGGATTTGTTCTTGAGGTAAGTGCTTGAAACAAGATGACGGTAA CGCTGTTCGGTCAGCCTGTGGTATCTTAATGACGATGTATGTTGGGATTG CAAGTAGGCAGGCTCGTTTGGAGACTAGAGGCTATTTGGGAAGAAAATAT GAACCGTCTGATGAGGAATATCGAGCCTTGCAGTAGCTGTGGGCGTAGCT AAGCCAATTCCTCTGTGTGTATCGGATCGACTGTCTGGATGGCGACTGTT GGCTCCCTACTTCCTGAATACTGTCACCATCGTGGTGGTTTCCTCTTTTT TGGTGATGGGTGCCCAGAGGTTAATTTTTATTTCAAGTATTGATTATTGT CATTACCTAAACCGCCTTCACGGGTTAGGGAATCCGGCTGTCCTGTAGCT ATCTTGCCTATGTTCGCTGACCGTTTCGTCTATCATGATAGTCGTATCAC TACTTGGATGATCGGTTCTGTTCGTTAACGTTGTGCGACAGAACTAGGCA CGTCTGTCTTCTGTCGTTGTTTGCTTGGCAAGTGGGCTCGACTCGCCGTG AAGTAAGACCGCAGCTACCCGCAATATGTGTTGTGTGTGTGTGTGCGTGT GTTTTCCGTTCCCCCCGTTTTCTAAATCTGCTGCCCTCCGCCTTTTAGTG CCACCGTAGTCTCTTGTCAGTTGCCCACTGTCCTCTGTCGGCTGTACGCC CCAGCAGTGGAACCTATTGTTTCTTTACCCGCTCACGCGTAGAGGACAGA CTCACGTTCAGTGTAAGCAATTGACGAACGGATTCCGTGCGATCTGAACA TGCTCCGACCACCTGCTGCCGTCGCGCGGCGAATGACCTACTGTAGTACC AGCAGTGGCAAGTCAACCATTTAGGAACCCGACCCCACAACGACCAAAAA GGGGTCGTGAATAATGACGAATACATACATCCATCCTAAACATGCCGTAC ATCACAATACTTCGCCACGCATGTGAAAATGGAAAGCCTGGAGGTTGGCT ATGGCAAAATCCGATCTCCAAAAGGTTGAATCAAGTCCGTGTGGCCTTTA TCACTGTTGTAGTCCATCTCAGGAGGGTCCACAGGCGCCATACACTTTTG TCGCTTAGTGAATAGATTATATGAAGTTAGTATACCATTGCTCCTGCAGA GAAAAACACGTTTTTCTCGCTGCGGCTAAAAACGCGCATGTAGCTCAAAT CTCCAACCGCTTTGACATGAGTATCTCAAAATTATTCAGCCTTTCATTCT GAAGGCTTTTGCGCACATGAGATGTCAAAGGCATTATCACACCCTCGACT CCTTTGGCGATGGGATTTCTTCTCTATCAAATTTACTTTTAGTTAGTCGG CTGTTGTTTTTGTTTCGGGTATTGCTGCTGGACATGAGAAACACGTTACT TTTTGGTTTCGGCTGAACGCAGGTCATTACTGGTCCTCACCAGGGACAAG AGCTTCGTCTTGTCTCGGGGAGCGTAAATGAAGTTCGGATCGGGCGGGGG GCTCCGAGAAAGAGAGGCCTGCGCTTGGAGGAAGACCTGGAGGTTTCTGA AAGGTGTTCGGGTGTACGGATTTTGTATGATTTGGTATTCCAATGTCCGA TGTATTCCGATCATTGGACGATTTAAAAAAAAATCGCTGACGAACTACTC TAGTAGTACTTTGCAAAGGGATCCATTACTCCCTTTGCATGCTCGGATGG GCGCTGTGTCGTGGTTCGTCCTTCATCGGTTTGCGGGTTCATCTGGTGAT TGCGGCGAAGCCATAAACATGAACACAAGAGTCACTCATAATGCAAGTCT GTAGCCTACTGGTACGAATAGCCGCAGTGCAGCGCATACCCGGATGCGTT GGCTTTCTCGTGATCATTAGTGTCTTCCGCCATTCTCCCTCCTAGCCCGC CCTGACAGCGAATCGGTTACGTATCTGTTCGCATCGAGTGCATCATTGAA CACCCCTGCGGTAAATACTTACTCGATACTTCGATGCCCCCCTCTAGGAG GGAAGTCACGTTTGTATGGCGCTCTCGGTGAGGACATGCAGAGTTGGCAC GTAAGAGTGCCGTAAGCCCGCTTGCCTGGGGCAAACGATAGAAAGAGATC ACCCCACGAACAGGTGCCAACCCTTGGGGAGCATCTGCGAGGAAAATGCG CAGGTATTTATTGGATCGGAAATTCAGCATGAACACGTTCTACTGACAGC ATGAATGGTCACTGCTTGCGACAAAGGGTTTGTTTTATAACGAGACGTTG GTGTGGACTGGGGTCCGAGACGAGGAGGTCGCTGTTGGCGATACACACAA CGGAAATGATACTTGCAAAAGGAGTCTGTTTTGCGCAAATACTCTCAATT TTTTTTAATTGTCCTCACGATCATTTTCGTATTTTTCCGCGGGGTAAAAG ATGGTAATTCTTCGATTTGGCGCTTCCTTCTTTTGGCCTAAAAGGTAGTG GAGAAAGAGAGTGAGCAAGAAGGGTGTGCCTCGTACTTGCGCCCTCGGAA AATGCAGGCATGTCAAAATGGACCACCCGAGTCGTTGGTTGGTTGTTGGA CCTTCCAACCTACGTTATTCGTAGCTTTTACTCTCAAGAAGCTGTTAGTA GGTTGTTATGGCATGGTTGAAGTAAATATACGTGGACTGCGATGATCCTC AGTCGTGGTGGTGCAGTTCGTTGTACATGTACATGTTAGGTGTTGACTTT TGTGCAAGTGCAATAAGCCATGCCGAACATGTGCGGCTAGCGCTGAACAT TGCACGAAGGTAATCACACAATGGGGTAAGTCTATATCACCAACACGCCC CCTCCCTCCCCCCCCAACTACTTCTTCAGTTTGTGGATTATAACTATGTA ATCCAGCGACTTCTAGAAGATGTTGGGCATATCTCCGTTTTGTTTTATGG TCATTTTCATTTTTCTACATCACATAGTTGATCTCTTGCTACGTTTGACT CTTTTTTTACCCTATCAAGCCCCCCTATTGGTCATGACCCAGTTTCTGCT GATTACTATTCCCAAGTTTATGTTGAAGTCAGCTGCATAACTTTAATGGA GTAGTTCTATGGGCGTTGTACCTTCTCCCCGCTCCCTCACTGGTTCCCCG GTGCGAGGCACTTCCCACTGTTCGGGTCACGGAGTGTGTTTCTTGCCAAG GTGCCTTCACTTGAACCTTTTTTTCTTGTCAACGGCTATTTAGTTCATCG TTACGTCAATGTTGTTAGGTTCATGTTGGTGTAACGAGGTATGTATGCGC GGTATCAATTCCAGAAATAGACTTAATAGTGGCATGCAGTTGTGATGTTG AACATCCGGTACAAAGTCCTCGTACACACGTTTTTTCAGGTGAGTCTGCA GGATCTGCTCTCCAACCGATTTTAAGATACAGGCTGCTAAATTACAAAAT GCCCCTTTGTTATTATTATGTATGTATGTTAGGACTTTCATATCATGCTG CACAATTCTTCAACAATTACCAACTTCAAATTTTTTTCTCGTCGATATTA TTTTTATAAACAAATTAGTTAATTTAATAAATTACCATTTAAATTAAAAT AATTAATGCCTTTCAGACTCATTTGAGTTATGCTTTAATAACGAAATGGT ATGAATGTATGTATGCTCCGTGTTTTTATTTTATTTTTATTATTTGTGTT GTTTGTTTTTACCAACCTTGGTATTCGGCGGAGTAACGTACATACGTCGT GTTCAAAATTTTGAAATAGTACTGTACCTTTCGTGCTCGATTGCTGTTTT GCATATTGGAACGAACCAGGCACTCAGTCCTGCGGCCCACGGCGACCGGC CTTCGCTGCGAGGATGTGGGCAGCTTGAACGGCACTTTCGTGAATGAGGA AAAAATGAAAGGCCCTAAGATTCTAAAGGGTGGAGATGTTTTGCAAGTAG GCCAATCGGCTATCCGGATCAGGGTTTGCAGCGACTAAGGTCGAAATTCT TCTTTCCTCCTCGAGCTCTGTGCTTTCAAGGGGGGGGGGGTACTTATGTT TGGTATGCCTGTGGTATTAGATGATCGACCACGCGTCCTCGAGAGGATGG AGCCGTAAGATAGATTGCCGATGGATGATGACCAATCGCTCGCTTTAATT GCGAGAACAGTGGTTCACGAACGTTTTGGCGAGGGAGATGAGTTGGCGGG GAGAAGGGATTGCGTCGCAAAAAACAGAAATAGATCTACGGTGCAAGCAA TAGGTCCAACCGTATGTGTATTATCAAGTCGATAGTGCCATTGGTTTTCT CCAATGCTATGTTGGTACGCCGTGGGCAGAGTATCCACCTGCGATGAGTA GCTCATGTTTTTTACATATGCGCCCGTGGTGGAGTGAGTTGTCTTTGATG CGCATGCCAAAGACGAAAACAGTCTGTAGTTCATGTAGGAATTGTATGGG TCGATGAATTAGTGTAACGTGACGTTATATGGCGGGCAGCGTGCTTAACA GACGCGATGCGCGGACGTGAACAACGATGTAAATACAATG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2816:8288..19427+

>mRNA_H-paniculata_contig2816.7685.1 ID=mRNA_H-paniculata_contig2816.7685.1|Name=mRNA_H-paniculata_contig2816.7685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3960bp|location=Sequence derived from alignment at H-paniculata_contig2816:8288..19427+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTCCTTCCCTGAGTGGAAAGGTTCTCAAGAAGAAATGGCACTTGGG
CGAGCTTGTAGGCTCAGGCGCGTGTGCCCAAGTGTACGAAATGCCTCCTT
CCCTGAGTGGAAAGGTTCTCAAGAAGAAATGGCACTTGGGCGAGCTTGTA
GGCTCAGGCGCGTGTGCCCAAGTGTACGAACGAACATGGCGCGATTATTC
GATTGTTGCAGACGATGGTGCTCTGGTCGCCAAAGTGGCGCCTCTGCCAC
CGAAGTTACCTCCGGCTATGAGCAAAGGCAGGAAGAGAAAAAAGACAGAT
GAGGAGAAGCACGCGGACATGCTTTACTACGAGTACACTCTGTACAATGG
CTTCCTCCGTGGCCATGGGGGGGTGCCTAAGCGAACATGGCGCGATTATT
CGATTGTTGCAGACGATGGTGCTCTGGTCGCCAAAGTGGCGCCTCTGCCA
CCGAAGTTACCTCCGGCTATGAGCAAAGGCAGGAAGAGAAAAAAGACAGA
TGAGGAGAAGCACGCGGACATGCTTTACTACGAGTACACTCTGTACAATG
GCTTCCTCCGTGGCCATGGGGGGGTGCCTAAGATTCCGCAGGGGGGCTAT
GGCGAAGACCAAAGCATGCGGTTCCTCATCATGAGCAGGCTCGGGCCGGA
CATGGAAGCTGCGCAGTCAAAGAACGGTCCTTGGACCGTTGCGCGAATGG
CGGGATACGGGCGGCAAATGCTGGCCCTCATCCGAACTCTCCACGAAAAG
TGCAAGATGGTCTTCGTGGACGTCAAGCCTGATTCCGCAGGGGGGCTATG
GCGAAGACCAAAGCATGCGGTTCCTCATCATGAGCAGGCTCGGGCCGGAC
ATGGAAGCTGCGCAGTCAAAGAACGGTCCTTGGACCGTTGCGCGAATGGC
GGGATACGGGCGGCAAATGCTGGCCCTCATCCGAACTCTCCACGAAAAGT
GCAAGATGGTCTTCGTGGACGTCAAGCCTGAAAACTTCATGTTCGGGCTT
CCCGGCTCTAAAGACGGGGATAGGATCTTTCTCATTGACTTCGGTCTCAG
CGAGAGAAAACTTCATGTTCGGGCTTCCCGGCTCTAAAGACGGGGATAGG
ATCTTTCTCATTGACTTCGGTCTCAGCGAGAGATACACGACTGCGGGAGG
AGCTATCAGGCCTCAGAAGCAAAGTGCACAGGTGGCAGGGACTCCAGAGT
TTTTGTCTCTTAAGTGTCACGGAGGCGCTGGTGCGGGAAGATACACGACT
GCGGGAGGAGCTATCAGGCCTCAGAAGCAAAGTGCACAGGTGGCAGGGAC
TCCAGAGTTTTTGTCTCTTAAGTGTCACGGAGGCGCTGGTGCGGGAAGGT
GCGACGACCTCGAGTCGGTCGGCTACGTACTACTGGCTATGCTACGAAAC
GGCTGCCTCCCCTGGAGCAACGCCACCAGCGTTGCCCACGGGCTTGTCGT
AAAAAAATCCACGTCCCTCGAGGACCTCTGCGCCGGCTTCCCGCCACCGC
TCCTCCGCTACATGCAGAGTGTCCGTGGCATGTCATACGAACAAGTCCCG
GACTACGACGCTTTAGACAAGCTGCTCCAGGGGGTGGAGAAGGAAGGACG
GGGTGGGAAGGGTACAGCAGCGCCGGCGCCGGCGCCGGCGAAAACAAAGA
TAGGGGAAGGTGCTGCTACCGCCGTCAGTCGACGGGTAGCCGCCCGCACA
GGGGCGGGAGGGACTAGCAATTGCAATGCTACTGCTGCGGCGGCGACTGT
GGTGGCGTCGGGGGCTGCTCCTGTGAATCAGACAGAAAATGTCCGCGCGG
GCAAGGGTCAGAAGGGAAAAGCCAAGTCTCGTGCAGCAGCAGGGGTCGCG
GTGGCGGAGGTGGTCGAGACGGTGGCTGCGCCAGCGAAGCGTGCTGCTGG
GGGGCGAGCAGCCGGGCGCAGCGGGGCGGGCAGTCATGTTGCTGAGGGCG
GCAGTGGCGGTGATTCCTCGCCAGTTGCTAAGAAGGTGCGACGACCTCGA
GTCGGTCGGCTACGTACTACTGGCTATGCTACGAAACGGCTGCCTCCCCT
GGAGCAACGCCACCAGCGTTGCCCACGGGCTTGTCGTAAAAAAATCCACG
TCCCTCGAGGACCTCTGCGCCGGCTTCCCGCCACCGCTCCTCCGCTACAT
GCAGAGTGTCCGTGGCATGTCATACGAACAAGTCCCGGACTACGACGCTT
TAGACAAGCTGCTCCAGGGGGTGGAGAAGGAAGGACGGGGTGGGAAGGGT
ACAGCAGCGCCGGCGCCGGCGCCGGCGAAAACAAAGATAGGGGAAGGTGC
TGCTACCGCCGTCAGTCGACGGGTAGCCGCCCGCACAGGGGCGGGAGGGA
CTAGCAATTGCAATGCTACTGCTGCGGCGGCGACTGTGGTGGCGTCGGGG
GCTGCTCCTGTGAATCAGACAGAAAATGTCCGCGCGGGCAAGGGTCAGAA
GGGAAAAGCCAAGTCTCGTGCAGCAGCAGGGGTCGCGGTGGCGGAGGTGG
TCGAGACGGTGGCTGCGCCAGCGAAGCGTGCTGCTGGGGGGCGAGCAGCC
GGGCGCAGCGGGGCGGGCAGTCATGTTGCTGAGGGCGGCAGTGGCGGTGA
TTCCTCGCCAGTTGCTAAGAAGGCAGGGGGGGTGGTTAGACGAGCCACGT
CCCCCTCGATGAAACTACCTGCCTCTCTGGCCGCTATGGTCGATGGTGGA
GTTTCACCCGCAACTCGCCGCAGCCCTCGCACCAAGAACAAGTCCCCGCA
AGACAAAAAGAGGGAGGAAATGGAAGAACCGTCCGAAGAGCTGGACGAGG
ATGAAGAGGCGGGCTTCCACGACGCGCGTGAGGATGATGAGGAAGAGGAC
ATGGAAGTCACCGAGGTTGGGAAGGGAAGAAGCGTAAATAGGGGGCGGGG
GGTTGCGGCATCTCGACGGCCAACAAGAAGTGCTGCCGCTACTTCTGCTC
CGGCTGGTGGTGGTGCAGCAGATGAAGGATTTGTTCTTGAGGCAGGGGGG
GTGGTTAGACGAGCCACGTCCCCCTCGATGAAACTACCTGCCTCTCTGGC
CGCTATGGTCGATGGTGGAGTTTCACCCGCAACTCGCCGCAGCCCTCGCA
CCAAGAACAAGTCCCCGCAAGACAAAAAGAGGGAGGAAATGGAAGAACCG
TCCGAAGAGCTGGACGAGGATGAAGAGGCGGGCTTCCACGACGCGCGTGA
GGATGATGAGGAAGAGGACATGGAAGTCACCGAGGTTGGGAAGGGAAGAA
GCGTAAATAGGGGGCGGGGGGTTGCGGCATCTCGACGGCCAACAAGAAGT
GCTGCCGCTACTTCTGCTCCGGCTGGTGGTGGTGCAGCAGATGAAGGATT
TGTTCTTGAGGTCATTACTGGTCCTCACCAGGGACAAGAGCTTCGTCTTG
TCTCGGGGAGCGTAAATGAAGTTCGGATCGGGCGGGGGGCTCCGAGAAAG
AGAGGCCTGCGCTTGGAGGAAGACCTGGAGGTTTCTGAAAGGTCATTACT
GGTCCTCACCAGGGACAAGAGCTTCGTCTTGTCTCGGGGAGCGTAAATGA
AGTTCGGATCGGGCGGGGGGCTCCGAGAAAGAGAGGCCTGCGCTTGGAGG
AAGACCTGGAGGTTTCTGAAAGGCACTCAGTCCTGCGGCCCACGGCGACC
GGCCTTCGCTGCGAGGATGTGGGCAGCTTGAACGGCACTTTCGTGAATGA
GGAAAAAATGAAAGGCCCTAAGATTCTAAAGGGTGGAGATGTTTTGCAAG
TAGGCCAATCGGCTATCCGGATCAGGGTTTGCAGCGACTAAGCACTCAGT
CCTGCGGCCCACGGCGACCGGCCTTCGCTGCGAGGATGTGGGCAGCTTGA
ACGGCACTTTCGTGAATGAGGAAAAAATGAAAGGCCCTAAGATTCTAAAG
GGTGGAGATGTTTTGCAAGTAGGCCAATCGGCTATCCGGATCAGGGTTTG
CAGCGACTAA
back to top