mRNA_H-paniculata_contig2813.7679.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A6G0W7J2_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W7J2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.140e-19 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query: 31 VEPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 405
EP+N +EA + P+ +HWQ + + E+ LV NG W VE P + VVS +YK K EG ++K+K RLVA G Q GV F + +P AS +++ LAA +R++D QAYL+A D
Sbjct: 1080 TEPRNAKEALSGPQAKHWQESMQAELDGLVANGTWEVVERPPSGNVVSHKWVYKIKYDREGQIDKFKARLVARGFTQRYGVEFSKTFAPVIKQASVRVIFALAATLKRTVRHLDFPQAYLKAETD 1204
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 91.3 bits (225), Expect = 9.920e-19 Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 1
Query: 34 EPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYL 390
EP++ EAQASPEW W++A + E L G W + P ++ V +++RK +EG V KYK RLVA G QI G+ F E +P S + +L LA + WE+ +D++ AYL
Sbjct: 906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYL 1024
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: J6ERE3_TRIAS (Gag-Pol n=1 Tax=Trichosporon asahii var. asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC 7840 / NBRC 103889/ NCYC 2677 / UAMH 7654) TaxID=1186058 RepID=J6ERE3_TRIAS) HSP 1 Score: 90.1 bits (222), Expect = 2.510e-18 Identity = 51/124 (41.13%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 34 EPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 405
+PK EA A P+ E W A + EI LV G W + + P +K V+ ++KRK +GNV KYK RLV G QI GV F+E +P + S ++L +AA ELR D+E AYL +D
Sbjct: 890 DPKTVAEALALPDAEQWIEAMKKEIDNLVGKGTWSEAKLPKHKKAVTAKWVFKRKRDADGNVVKYKARLVGRGFSQIPGVDFEETYAPVGRSTSLLLILSIAARYNLELRQADVEGAYLNGTID 1013
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A1M2VH23_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VH23_TRAPU) HSP 1 Score: 84.0 bits (206), Expect = 3.200e-18 Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 1
Query: 34 EPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVD 372
EP+ EAQASP+W HW+ A EI L ++ + VE P+N +V +++ K EG++ +YK RLVA G Q+ G+ F E +P AS + +L LAA WEL +D
Sbjct: 12 EPRTLAEAQASPDWPHWENAIAKEIDNLRKHDTYDLVEPPHNTNIVGSRFVFRIKRDAEGSITQYKARLVAQGFTQMPGIDFNETFAPVAKLASIRTILALAARYDWELEQMD 124
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A177TJ72_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177TJ72_9BASI) HSP 1 Score: 89.7 bits (221), Expect = 3.270e-18 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 25 LPVEPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYL 390
+ +EP ++A P+W W A + E+ L E G W+ E P+N+ VV ++K K+ EGNV +YK RLVA G Q+ GV + E SP + + +L LAA W + +D+ AYL
Sbjct: 286 IEIEPNTLKDAMRRPDWSLWLEAMKEEMNSLTEMGTWVLEELPDNQSVVGSRWVFKLKLDSEGNVARYKARLVAQGFSQVAGVNYNETYSPVTRFVTIRTLLALAAHFDWHVHQLDVVTAYL 407
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A392MEN3_9FABA (Retrovirus-related pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MEN3_9FABA) HSP 1 Score: 87.4 bits (215), Expect = 3.760e-18 Identity = 43/125 (34.40%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 31 VEPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 405
+EPK + +A + + W++A +IE+Q L +N W+ VE P+ K + +YK K G++E+YK RLVA G Q +G+ + + SP + +++L LAAI+GW L +D+ A+L ++
Sbjct: 139 IEPKTYNQAS---KLDCWRKAMDIELQDLADNQTWIVVELPSGKVPIGCKWVYKIKYHANGSIERYKARLVAKGYTQTEGIDYCDIFSPVAKITTVRVLLALAAIKGWHLEQLDVNNAFLHGDLN 260
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI) HSP 1 Score: 88.6 bits (218), Expect = 8.660e-18 Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 34 EPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 405
EPK EA+ P+W HW+ A + E+ L ENG W + P + V ++K K+ +G V+KYK RLVA G Q GV + E +P A+ ++++ LAA +GW +D+ AYL ++
Sbjct: 829 EPKTIEEAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLE 952
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A2P6RCF4_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RCF4_ROSCH) HSP 1 Score: 87.8 bits (216), Expect = 1.590e-17 Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 28 PVEPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYL 390
P+EPK+ R A + PEW+ A EI L++ G W V P K +V +YK K +G++ +YK RLVA G Q KG+ + E SP ++ ++++ LAA+ WELR +D++ A+L
Sbjct: 630 PIEPKSFRAAASIPEWDE---AMYEEIDALLKQGTWELVPLPKAKNIVGSKWIYKIKKNPDGSISRYKARLVAQGFSQEKGLDYDETFSPVVRHSTVRLVVALAAMNKWELRQLDVKNAFL 747
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A4S4LPF2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LPF2_9AGAM) HSP 1 Score: 87.0 bits (214), Expect = 2.890e-17 Identity = 41/124 (33.06%), Postives = 70/124 (56.45%), Query Frame = 1
Query: 34 EPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 405
EP+N EA+ +W HW+ A + E+ + + G W V+ P++ VV ++K K G +G + KYK RLVA G Q+ G+ + + +P S + +L +AA WE+ +D++ AYL ++
Sbjct: 347 EPRNVTEARRGSDWSHWEAAMKTELGMIEKLGTWELVDRPSDANVVGSKWVFKIKRGADGEIIKYKARLVAQGFTQVPGIDYSDTFAPVAKLESIRALLAIAARNDWEIHQMDVKNAYLNGDLE 470
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Match: A0A369JJ40_HYPMA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369JJ40_HYPMA) HSP 1 Score: 87.0 bits (214), Expect = 3.020e-17 Identity = 45/121 (37.19%), Postives = 68/121 (56.20%), Query Frame = 1
Query: 43 NHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECPNNKPVVSMMMLYKRKIGEEGNVEKYKCRLVAHGNLQIKGVYFQEASSPAPAAASTKMMLLLAAIQGWELRYVDLEQAYLQAPVD 405
++ EA+ P+W W+ A ++E++ L +NG W VE P VV + + K G +EKYK RLVA G QI GV F E +P AS +++L +AA GW + D + A+L + +D
Sbjct: 1059 SYSEAKKRPDWPKWEEAIKVELENLKQNGTWELVERPAGVNVVDCKWVLRIKKNAAGEIEKYKARLVARGFTQIHGVDFYETYAPVARLASFRLLLAIAARNGWPVDSFDFDGAFLNSVLD 1179 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2813.7679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2813.7679.1 >prot_H-paniculata_contig2813.7679.1 ID=prot_H-paniculata_contig2813.7679.1|Name=mRNA_H-paniculata_contig2813.7679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp MPEELRSDLPVEPKNHREAQASPEWEHWQRAEEIEIQCLVENGVWMQVECback to top mRNA from alignment at H-paniculata_contig2813:5093..5500+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2813.7679.1 ID=mRNA_H-paniculata_contig2813.7679.1|Name=mRNA_H-paniculata_contig2813.7679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=408bp|location=Sequence derived from alignment at H-paniculata_contig2813:5093..5500+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2813:5093..5500+ >mRNA_H-paniculata_contig2813.7679.1 ID=mRNA_H-paniculata_contig2813.7679.1|Name=mRNA_H-paniculata_contig2813.7679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at H-paniculata_contig2813:5093..5500+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |