mRNA_H-paniculata_contig11208.767.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 210 bits (534), Expect = 1.870e-58 Identity = 107/287 (37.28%), Postives = 170/287 (59.23%), Query Frame = 3 Query: 888 LAIRYALALPPGKK*LPKGVGPELAGHFGIGDQYPRQLWSRVRERLDHDDTLSLRSAP*SGRPSDFAPTKHAMIPRVNAANRTLILDQLLSAKLAEVGLAAGSSKLQPCLKEMGATRIKQCITPSLSLTHRKNRVDFIMDQAATNLITFRSGFQTIHIGEAWFFLIRHRDRVRMFLGEERVGSTQVQHKSHIPKVMFICAVSRADPSRDFDGEIGI*RVCVIKQAQTSSAR-----------------RGRG------QQYEFDVTINAEWYQEWYKDSFLPSVEGK 1679 +A+ A+ + PG +PKGV + +G+G +YP +LW RV+ ++D+ L L + SGRPS P+K A + VN+ NR+ L Q+ S +L ++GL G ++ ++GA + I PSLS +++R+DFI D+ + + +H+ E+WF+L+R +++VR+F GE+ G +V H+SH+PK+M I A +R DP+ DFDG+IGI R+CVI+ AQ SS + GR ++YEFD TI+AEWY++WY D LP+++ K Sbjct: 1 MAVEIAMGIQPGFSRIPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQV-SDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEK 286
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: A0A1R3I5M9_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3I5M9_9ROSI) HSP 1 Score: 72.8 bits (177), Expect = 7.250e-10 Identity = 65/256 (25.39%), Postives = 109/256 (42.58%), Query Frame = 3 Query: 933 LPKGVGPELAGHFGIGDQYPRQLWSRVRERLDHDDTLSLRSAP*SGRPSDFAPTKHAMIPRVNAANRTLILDQLLSAKLAEVGLAAGSSKLQPCLKEMGATRIKQCITPSLSLTHRKNRVDFIMDQAATNLITFRSGFQTIHIGEAWFFLIRHRDRVRMFLGEERVGSTQVQHKSHIPKVMFICAVSRADPSRD------FDGEIGI*RVCVIKQAQTSSARRGRGQQYEFDVT-INAEWYQEWYKDSFLPSVEGK 1679 L G LA FG+ + ++LW R +E + +++ + + IP + + D L +K S L LK R + P+L+ ++ R+ F + +N TF+ + TIHI E WF+LIR + EE T + K+ IPKVMF+ AV+R P D F G+IG+ + + A+ SS R G +T +N + + + + +P++ K Sbjct: 46 LKDGTKKMLASSFGVCTKSIQRLWKRAKET---GNVYHMKTKNCGRKRIQLDSDQFCEIPLSRRSTLRSMADALKISK----------STLHRLLKIGAILRHSSPLRPNLTFENKIARLRFCLKMLESNDSTFKGMYDTIHIDEKWFYLIRKSVNYYLLPDEEEPHRT-CKSKNFIPKVMFLAAVAR--PRFDTAGNVLFSGKIGVFPLVTKEPAKRSSVNRHAGTLETKPITTVNKDVMKTFLINKVIPTIREK 285
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: F0WV30_9STRA (Transposase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WV30_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 4.170e-9 Identity = 61/210 (29.05%), Postives = 91/210 (43.33%), Query Frame = 3 Query: 1068 GRPSDFAPTKHAMIPRVNAANRTLILDQLLSAKLAEVGLAAGSSKLQPCLKEMGATRIKQCITPSLSLTHRKNRVDFIMDQAATNLI----TFRSGFQTIHIGEAWFFLIRHRDRVRMFLGEERVGSTQVQHKSHIPKVMFICAVSR----ADPSRDFDGEIGI*RVCVIKQAQTSSARRGRGQQYEFDVTINAEWYQEWYKDSFLPSVE 1673 G ++ H I ++ +R D L S A LA S+ LQ +K + P+LS RV FI + LI TF + +H+ E WFF+ + + RV + E +HKSHIPK+MF+CAV+R + FDG +G+ A+ +S R G N E Y+ DS LP+++ Sbjct: 119 GVSEEYIKDLHERISKLKLEHR----DDLRSLSAA---LAIPSTTLQRYVKSKVLRVHTVTLKPTLSEDQNAERVRFI--SSFITLIPRGATFSPMYDRVHLDEKWFFMKKTKRRVYL-TPTEPTPYLHTRHKSHIPKIMFLCAVARPRINSCTGEVFDGRLGMWPFANYAPAERASRNREAGTLVLKSFPANKETYKRMLIDSVLPAIK 318
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: A0A081AGH7_PHYPR (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=A0A081AGH7_PHYPR) HSP 1 Score: 63.5 bits (153), Expect = 6.550e-8 Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 1 Query: 1678 KMPWLEGEEVVAQQDGATLHTRKDTPRKLNGLGRDGGWNINLVAQPAQSPDPNMNDSGLFASLKSRVWS*RYGTIDGLV 1914 K+ W G+ V Q D A H D P + DGGW++++ QPA SPD N+ND G FAS++S + TI+ LV Sbjct: 26 KVVWPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLV 103
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.160e-7 Identity = 35/83 (42.17%), Postives = 45/83 (54.22%), Query Frame = 1 Query: 1666 ALKEKMPWLEGEEVVAQQDGATLHTRKDTPRKLNGLGRDGGWNINLVAQPAQSPDPNMNDSGLFASLKSRVWS*RYGTIDGLV 1914 A++ + P G + QQD A H D P L GR GWNI L+AQPAQSPD N+ D G F +++S TID L+ Sbjct: 277 AIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLI 358
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: W2PEH8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PEH8_PHYPN) HSP 1 Score: 63.5 bits (153), Expect = 2.690e-7 Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 1 Query: 1678 KMPWLEGEEVVAQQDGATLHTRKDTPRKLNGLGRDGGWNINLVAQPAQSPDPNMNDSGLFASLKSRVWS*RYGTIDGLV 1914 K+ W G+ V Q D A H D P + DGGW++++ QPA SPD N+ND G FAS++S + TI+ LV Sbjct: 127 KVVWPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLV 204
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: V9F261_PHYPR (DDE_3 domain-containing protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9F261_PHYPR) HSP 1 Score: 62.8 bits (151), Expect = 1.040e-6 Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 1 Query: 1678 KMPWLEGEEVVAQQDGATLHTRKDTPRKLNGLGRDGGWNINLVAQPAQSPDPNMNDSGLFASLKSRVWS*RYGTIDGLV 1914 K W G+ V Q D A H D P + DGGW++++ QPA SPD N+ND G FAS++S + TI+ LV Sbjct: 7 KAVWPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLV 84
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: A0A5D6XR23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR23_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.200e-6 Identity = 41/122 (33.61%), Postives = 57/122 (46.72%), Query Frame = 3 Query: 1344 FQTIHIGEAWFFLIRHRDRVRMFLGEERVGSTQVQHKSHIPKVMFICAVSR--ADPSR--DFDGEIGI*RVCVIKQAQTSSARRGRGQQYEFDVTINAEWYQEWYKDSFLPSVEGKDAVVGG 1697 F +HI E WF + + + RV + E QHKSH+PK+MF+CA++R DP+ FD IGI A SS+ R G + N E Y+ +P+V K GG Sbjct: 25 FDRVHIDEKWFVVNKTKRRVYLTPTEPN-PQRHAQHKSHLPKLMFLCAITRPRVDPATGASFDRGIGIWPFAEEIPAYRSSSNRQAGTLETKPLPANKETYKAMIMTEVVPAVVSKWPAWGG 145
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: W2QZ56_PHYPN (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QZ56_PHYPN) HSP 1 Score: 57.4 bits (137), Expect = 4.130e-6 Identity = 34/70 (48.57%), Postives = 39/70 (55.71%), Query Frame = 1 Query: 1666 ALKEKMPWLEGEEVVA-QQDGATLHTRKDTPRKLNGLGRDGGWNINLVAQPAQSPDPNMNDSGLFASLKS 1872 A+K K P E + V+ QQD AT H P L G GWNI L QPA SPD N D GLFASL++ Sbjct: 70 AIKLKRPRREKQNVILIQQDNATPHISPSDPDDL-AAGTADGWNIRLSYQPANSPDTNTLDLGLFASLQA 138
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Match: A0A6A3MN98_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MN98_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 2.370e-5 Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 1 Query: 1666 ALKEKMPWLEGEEVVAQQDGATLHTRKDTPRKLNGLGRDGGWNINLVAQPAQSPDPNMNDSGLFASL 1866 A++ K+P + QQD A H R+D +L +G+ GW I + QP +SP+ N+ D G+FAS+ Sbjct: 7 AMRAKLPVIRDTTAFVQQDNAGPHVREDDT-ELETVGKGDGWKIKMRCQPPRSPELNVLDLGVFASI 72 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11208.767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11208.767.1 >prot_H-paniculata_contig11208.767.1 ID=prot_H-paniculata_contig11208.767.1|Name=mRNA_H-paniculata_contig11208.767.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp MIPRVNAANRTLILDQLLSAKLAEVGLAAGSSKLQPCLKEMGATRIKQCIback to top mRNA from alignment at H-paniculata_contig11208:6477..8398+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11208.767.1 ID=mRNA_H-paniculata_contig11208.767.1|Name=mRNA_H-paniculata_contig11208.767.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1922bp|location=Sequence derived from alignment at H-paniculata_contig11208:6477..8398+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11208:6477..8398+ >mRNA_H-paniculata_contig11208.767.1 ID=mRNA_H-paniculata_contig11208.767.1|Name=mRNA_H-paniculata_contig11208.767.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=870bp|location=Sequence derived from alignment at H-paniculata_contig11208:6477..8398+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |