mRNA_H-paniculata_contig28019.7659.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig28019.7659.1 vs. uniprot
Match: D7G2Y5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y5_ECTSI) HSP 1 Score: 298 bits (762), Expect = 1.050e-95 Identity = 174/354 (49.15%), Postives = 227/354 (64.12%), Query Frame = 1
Query: 1 GLIETCQDMQDAVDSLQSTGGDVTVDMFPFANIECDNFTTFTIDTHHLTIESSEDLDIYSGGNTDLFQVRFEVINGGELTYEPNVEFLGVDLQNVDGGAVYVGEGSRVRFLNDFGTEGVGVRSIADLG-DFSSYQLSGGCVWTNGYFRVGGLATMNDCEVGGGGESSPGPGGAVFVGEEGLVVFQGGVEISDVSIIDDEGNDGGGIYNTGKVIVKGKSKFESLFAESAGAIFNAEGASFKFKEGATAIFTECRSFDGIGGAILNEGVFEFSGAALFLDGRSDRGGAIVVQDTGEMVLSEDSVFFENESSDDIGAPV-YVFSGGSLTVPESLLFIGNGNEDAVCDTIYFEDGAVC 1056
G +ETCQD+ DA S DV V++ P +I CD+FTT ++ + LT+ + + G+ L +VRFEV +G +L + P F G + Q+V+GGAVYVGEGS RF + T VGVRS+ + G DF+SYQL GGCV+ +GYFRV G A+ CE GGGESSPGPGG ++VGE G V+F G V + DVSIIDDEGN+GGGIYN GKV +KG + F++L AE+ GAIFN GA F+FK+GATA F +C SFDGIGGA+ N G F+ SG A ++ R+ VV +G LSE SVF N D P+ +V GG LT + F + D C T+Y+E+G VC
Sbjct: 22 GQLETCQDLLDAFALTASQ--DVVVEIQPGQDITCDSFTTMSMSANSLTVMTPDG----QSGSVGLNEVRFEVTDGAKLLWYPGASFTGTEYQDVNGGAVYVGEGSSARFYDTLTTSEVGVRSVPEEGSDFASYQLIGGCVYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNAVFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGIGGAVFNAGYFKLSGPAEVVECRAP---TFVVGSSGYTRLSEGSVF--NGDGSDYPEPIMFVMEGGRLTGVGKVTF--DNAADTGCGTVYYEEGDVC 362
BLAST of mRNA_H-paniculata_contig28019.7659.1 vs. uniprot
Match: A0A6H5JCE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE) HSP 1 Score: 290 bits (741), Expect = 1.160e-91 Identity = 168/337 (49.85%), Postives = 215/337 (63.80%), Query Frame = 1
Query: 1 GLIETCQDMQDAVDSLQSTGGDVTVDMFPFANIECDNFTTFTIDTHHLTIESSEDLDIYSGGNTDLFQVRFEVINGGELTYEPNVEFLG---VDLQNVDGGAVYVGEGSRVRFLNDFGTEGVGVRSIADL-GDFSSYQLSGGCVWTNGYFRVGGLATMNDCEVGGGGESSPGPGGAVFVGEEGLVVFQGGVEISDVSIIDDEGNDGGGIYNTGKVIVKGKSKFESLFAESAGAIFNAEGASFKFKEGATAIFTECRSFDGIGGAILNEGVFEFSGAALFLDGRSDRGGAIVVQDTGEMVLSEDSVFFENESSDDIGAPVYVFSGGSLTVPESLLFIG 999
GLIETC D+ A + Q+ DV V+M PFA+IEC+ FT T+ ++ LT+ SSE++D +SG ++ L VR +V NG +L +E NV F G DL VDGGAVYVGEGS VRFLND + + + + D DFSS+ SGGCVWT GYFRV G AT C++ G GES PGPGGAV+VGE G V+F GGV I+D I DD G GGGIYN GKV +KG S+FE + A S AI+N EGA+F F+ GA A F + + D G A+ N G F+FSG ALF D IV D E ++SEDS F+ + S G + V G T+P+S+ F+G
Sbjct: 101 GLIETCDDLLAAFEQTQTE--DVVVEMHPFADIECETFTNMTMTSNSLTVSSSENIDNFSGSSS-LVNVRLDVTNGAKLFWETNVIFEGDEETDLM-VDGGAVYVGEGSTVRFLNDVQMQDIAIINERDEDSDFSSFVRSGGCVWTAGYFRVDGEATFTGCDISGAGESPPGPGGAVYVGETGSVLFNGGVTITDTHITDDFGGSGGGIYNLGKVNIKGDSRFEDISASSGVAIYNGEGATFNFRSGARAFFKDLNNRDSEGSALFNRGFFKFSGPALFFDAELP---VIVAVDNSETIISEDSAFWTWDESP--GDALSVNDGADFTLPDSVTFVG 428
BLAST of mRNA_H-paniculata_contig28019.7659.1 vs. uniprot
Match: A0A6H5JYQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ0_9PHAE) HSP 1 Score: 284 bits (727), Expect = 1.410e-87 Identity = 171/358 (47.77%), Postives = 225/358 (62.85%), Query Frame = 1
Query: 1 GLIETCQDMQDAVDSLQSTGGDVTVDMFPFANIECDNFTTFTIDTHHLTIESSEDLDIYSGGNTDLFQVRFEVINGGELTYEPNVEFLGVDLQNVDGGAVYVGEGSRVRFLNDFGTEGVGVRSIADLG-DFSSYQLSGGCV----WTNGYFRVGGLATMNDCEVGGGGESSPGPGGAVFVGEEGLVVFQGGVEISDVSIIDDEGNDGGGIYNTGKVIVKGKSKFESLFAESAGAIFNAEGASFKFKEGATAIFTECRSFDGIGGAILNEGVFEFSGAALFLDGRSDRGGAIVVQDTGEMVLSEDSVFFENESSDDIGAPVY-VFSGGSLTVPESLLFIGNGNEDAVCDTIYFEDGAVC 1056
G +ETCQD+ DA S DV V++ P +I CDNFTT ++ + LT+ +++ G+ L +VRFEV +G +L + P F D Q+V+GGAVYVGEGS RF + T VGVRS+ + G DF+SY+L GGCV + +GYFRV G A+ CE GGGESSPGPGG ++VGE G V+F G V + DVSIIDDEGN+GGGIYN GKV +KG + F++L AE+ GAIFN GA F+FK+GATA F +C SFDG GGA+ N G F+ SG A ++ R+ VV +G LSE SVF N + P+ V GG LT + F + + C T+Y+E+G VC
Sbjct: 252 GQVETCQDLLDAFALTASQ--DVVVEIQPGQDITCDNFTTMSMSANSLTVTATDG----QSGSVGLNEVRFEVTDGAKLFWHPGASFTETDYQDVNGGAVYVGEGSTARFYDTLTTSEVGVRSVPEEGSDFASYELIGGCVRAYTYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNALFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGTGGAVFNAGYFKLSGPAEVVECRAP---TFVVGSSGYTRLSEGSVF--NGDGYEYPEPIILVREGGRLTGVGKVTF--DNAAETGCGTVYYEEGDVC 596
BLAST of mRNA_H-paniculata_contig28019.7659.1 vs. uniprot
Match: D7G0Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q4_ECTSI) HSP 1 Score: 256 bits (653), Expect = 1.790e-79 Identity = 154/336 (45.83%), Postives = 204/336 (60.71%), Query Frame = 1
Query: 1 GLIETCQDMQDAVDSLQSTGGDVTVDMFPFANIECDNFTTFTIDTHHLTIESSEDLDIYSGGNTDLFQVRFEVINGGELTYEPNVEFLGVDL--QNVDGGAVYVGEGSRVRFLNDFGTEGVGVRSIADL-GDFSSYQLSGGCVWTNGYFRVGGLATMNDCEVGGGGESSPGPGGAVFVGEEGLVVFQGGVEISDVSIIDDEGNDGGGIYNTGKVIVKGKSKFESLFAESAGAIFNAEGASFKFKEGATAIFTECRSFDGIGGAILNEGVFEFSGAALFLDGRSDRGGAIVVQDTGEMVLSEDSVFFENESSDDIGAPVYVFSGGSLTVPESLLFIG 999
GLIETC+D+Q A + Q+ DV ++ F +IEC FT T+ ++ LT+ S+EDL I SG +T L VR EV NG +L +E +V FLG + NV+GG V+VGEGS VRFLND V + + D D + + GGCVWT G+FRV G AT C + G GES PG GGAVFV G V+F GV ISD I +D G DGGGI+N GKV +KG S+FE L A S AIFN E ASF F+ GA+A F + + D G A++N G F+FSG LF+D + IV + ++S DS F+ E+ D G + V +++P S+ F+G
Sbjct: 20 GLIETCEDLQAAFELTQTQ--DVVDEISTFGDIECPMFTNMTMTSNTLTLNSAEDLSITSG-STSLINVRLEVTNGAKLVWETSVFFLGDEEVENNVNGGGVFVGEGSTVRFLNDVQIRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGTGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPVLFVDAEAP---VIVATEGSTTIISRDSAFWMFENDDVTGEAISVADSAEVSIPGSVSFVG 349
BLAST of mRNA_H-paniculata_contig28019.7659.1 vs. uniprot
Match: D7FGT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT1_ECTSI) HSP 1 Score: 255 bits (651), Expect = 3.470e-79 Identity = 152/337 (45.10%), Postives = 209/337 (62.02%), Query Frame = 1
Query: 1 GLIETCQDMQDAVDSLQSTGGDVTVDMFPFANIECDNFTTFTIDTHHLTIESSEDLDIYSGGNTDLFQVRFEVINGGELTYEPNVEFLG---VDLQNVDGGAVYVGEGSRVRFLNDFGTEGVGVRSIADL-GDFSSYQLSGGCVWTNGYFRVGGLATMNDCEVGGGGESSPGPGGAVFVGEEGLVVFQGGVEISDVSIIDDEGNDGGGIYNTGKVIVKGKSKFESLFAESAGAIFNAEGASFKFKEGATAIFTECRSFDGIGGAILNEGVFEFSGAALFLDGRSDRGGAIVVQDTGEMVLSEDSVFFENESSDDIGAPVYVFSGGSLTVPESLLFIG 999
GLIETC+D+Q A + Q+ DV ++ PF +IEC+ FT T+ ++ LT+ SSE+LD + G ++ L VR V NG EL +E +V F+G V+L VDGGAV+VGEGS V FLND E + + + D DF+S+ SGGCVWT G F V G AT C++ G GES PGPGGA++VG G V F GV IS+ I DD G GGGIYN G+V + G S+FE + A S AI+N EGA F F A+A F + + D +G + N G FEFSG ALF++ + IV +T + +LSE+S F+ + ++ G + V T+P S++F+G
Sbjct: 20 GLIETCEDLQAAFNLTQTQ--DVIDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSS-LTNVRLVVTNGAELIWETHVNFIGDEEVELM-VDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISASSGVAIYNGEGAEFYFTNDASAFFRDLNNRDSVGSGLTNLGYFEFSGPALFVEADAP---VIVATETSQTILSENSAFWTFD--EEFGEALSVDEAADFTIPASVVFVG 347
BLAST of mRNA_H-paniculata_contig28019.7659.1 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI) HSP 1 Score: 244 bits (622), Expect = 3.380e-75 Identity = 153/336 (45.54%), Postives = 193/336 (57.44%), Query Frame = 1
Query: 1 GLIETCQDMQDAVDSLQSTGGDVTVDMFPFANIECDNFTTFTIDTHHLTIESSEDLDIYSGGNTDLFQVRFEVINGGELTYEPNVEFLGVDLQN--VDGGAVYVGEGSRVRFLNDFGTEGVGVRSIADL-GDFSSYQLSGGCVWTNGYFRVGGLATMNDCEVGGGGESSPGPGGAVFVGEEGLVVFQGGVEISDVSIIDDEGNDGGGIYNTGKVIVKGKSKFESLFAESAGAIFNAEGASFKFKEGATAIFTECRSFDGIGGAILNEGVFEFSGAALFLDGRSDRGGAIVVQDTGEMVLSEDSVFFENESSDDIGAPVYVFSGGSLTVPESLLFIG 999
GLIETC D+ A + Q+ DV V+M PFA+IECD FT T+ ++ LT L +E NV F G + VDGGAVYVGEGS VRFLND V + + D DF+S+ SGGCVWT GYFRV G AT C++ G GES PGPGGAV+VGE G V+F GV I++ SI DD G GGGIYN GKV +KG S+FE + A + AI+N EGA+F F+ GA A F + + D G A++N G F+FSG A F D IV D E +LSEDS F+ + S G + V G T+P+S+ F+G
Sbjct: 20 GLIETCDDLLAAFEQTQTE--DVVVEMHPFADIECDTFTNMTMTSNTLT-----------------------------LFWETNVIFEGDEEAELMVDGGAVYVGEGSTVRFLNDVQMRDVVIINERDEDSDFASFVRSGGCVWTAGYFRVDGEATFTGCDIIGAGESPPGPGGAVYVGETGSVLFNEGVTITETSITDDFGGKGGGIYNLGKVNIKGDSRFEEISASAGVAIYNGEGATFNFRNGAGAFFRDLNNRDSEGSALVNLGFFKFSGPAFFFDAELP---VIVAMDNSETILSEDSAFWTWDESP--GDALTVNEGADFTLPDSVTFVG 319
BLAST of mRNA_H-paniculata_contig28019.7659.1 vs. uniprot
Match: A0A6H5JF99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JF99_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 2.870e-9 Identity = 77/244 (31.56%), Postives = 105/244 (43.03%), Query Frame = 1
Query: 97 IECDNFTTFTIDTHHLTIESSEDLDIYSGGNTDLFQVRFEVINGGELTY--EPNVEFLGVDLQNVDGGAVYVGEGSRVRFLNDFGTEGVGVRSIADL-GDFSSYQLSGGCVWTNGYFRVGGLATMNDCEVGGGGESSPGPGGAVFVGEEGLVVFQGGVEISDVSIIDDEGNDGGGIYNTGKVIVKGKSKFE-SLFAESA-------GAIFNAEGASFKFKEGATAIFTECRSFDGIGGAILNEG 795
I CD TT +D + I ++ D+D Y+ N RFEV G +LT+ E F + Q DGGA+YV GS F V S + G+ SGG V+ E G+ G GGAV VG EG + FQG +E +D G GG I N G ++ + KS F + AE A GAI+ G++ +F ++E S GGA+ N G
Sbjct: 70 ISCDTITTVHVDGPYKFIVTT-DMDNYNFENA-----RFEVKGGADLTFAIEGGFSFNYAESQGTDGGAIYVESGSSATF---------DVPSKVNFEGNTVEAGYSGGVVYAXXXXXXXXXXXXISNEARSSGDEPAGYGGAVAVGPEGSLEFQGALEFTDNKA--QSGGSGGAIANFGSLVFRRKSYFWFNTAAEDANGDGGFGGAIYAGYGSTTEFFRRTIWFYSEAAS----GGALYNLG 292 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig28019.7659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig28019.7659.1 >prot_H-paniculata_contig28019.7659.1 ID=prot_H-paniculata_contig28019.7659.1|Name=mRNA_H-paniculata_contig28019.7659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=346bp MQDAVDSLQSTGGDVTVDMFPFANIECDNFTTFTIDTHHLTIESSEDLDIback to top mRNA from alignment at H-paniculata_contig28019:225..1286- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig28019.7659.1 ID=mRNA_H-paniculata_contig28019.7659.1|Name=mRNA_H-paniculata_contig28019.7659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1062bp|location=Sequence derived from alignment at H-paniculata_contig28019:225..1286- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig28019:225..1286- >mRNA_H-paniculata_contig28019.7659.1 ID=mRNA_H-paniculata_contig28019.7659.1|Name=mRNA_H-paniculata_contig28019.7659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2076bp|location=Sequence derived from alignment at H-paniculata_contig28019:225..1286- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |