prot_H-paniculata_contig280.7652.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig280.7652.1
Unique Nameprot_H-paniculata_contig280.7652.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length705
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig280.7652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 651..694
e-value: 2.2
score: 14.9
coord: 546..584
e-value: 0.0011
score: 28.3
coord: 162..201
e-value: 0.0031
score: 26.8
coord: 113..152
e-value: 22.0
score: 8.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 169..201
e-value: 0.11
score: 13.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 169..201
score: 10.208
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 552..593
score: 10.943
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 536..704
e-value: 1.6E-16
score: 62.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 62..277
e-value: 2.1E-15
score: 58.8
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 548..698
coord: 104..266
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 571..585
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 552..593
score: 10.496
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 169..210
score: 9.678
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 119..698

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig280contigH-paniculata_contig280:7071..12958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig280.7652.1mRNA_H-paniculata_contig280.7652.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig280 6810..13035 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig280.7652.1 ID=prot_H-paniculata_contig280.7652.1|Name=mRNA_H-paniculata_contig280.7652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=705bp
MRARIRERSFRRPVATDRWSLRPVSRIIGPRPLEFIRRQAWTALPARFSN
GISAVTSLCLVDENSAGGPPLLIAGDEDGGVAVQRLPMGCTSTCGTVEEE
SEEHSKKQEQWPLIPPLRRARLHGSCVNTIKLLPDKRGFVCASDDGVLSA
IASLEAESESNLRRATFALHGHSGFVTDCDTAACGHAILSSSTDGRMLLW
DPVASNTPVTSVAVGRAVNSACFSTGDPYAIICAPERFGFRSNGNISSSV
GGASDELVQIWDLRSLRCFRDTIPAAVAEAFGEPEPMSQGLPEPKSTLMS
SMQPPPSQALPNSTDYGHGRCNGFGATRSGTVTNSTPARLPWLASVGSFS
HESSSNVVESPLTALVRLSTWTSDSSDNEFSSPWGSGSTWSRVSDLQDTA
GRENTTNPYHTSTSPRSTADADDGRGSVDWTKATPVPTKRSRSSNENLSP
GSCGTNRGARGRRLSHPEAARETIGDGPVAFCCQADIPEDSRCLHTGLEG
KSWVPGGSVTWQPGKRRARRIEADTGARGTFPFPGLARPLSYSSKSSSCR
TCCDDNASVYSVQVTSDGRGILTASRDSTITLWNAQTRKVVHRFGHPRLS
VRARPILSGLAASGDEPRWSRGDSRFEQGYSCGEVFAGTTGGEVRAWKLG
SRFPHRVFKPARHHDGFEVTCVAGNRDGAMFASADSSGKICVQSATTGGR
NFDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam