mRNA_H-paniculata_contig280.7651.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Match: D7FVB5_ECTSI (Protein phosphatase type 2A regulator/ signal transducer n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB5_ECTSI) HSP 1 Score: 394 bits (1011), Expect = 2.050e-120 Identity = 298/783 (38.06%), Postives = 405/783 (51.72%), Query Frame = 1
Query: 697 AADLAASSP--DPHPSYPVEPNFKIGDCCSTAALSRACRGETEVADPTAVQEAVVNPSKWILFNQETGQQLDAQTFVDAVLMLSTSTVPRCNPFDANPPESARQRQLAGAWTGIRRSNSNGQSMSNRPSLLPQGSGGI---------------------NDSGSRSPR---PRKSPGMMATSLPNMNISTRTMHMSSSTSLS-----GAEGTFSLSNVQPGQVLLDVHAGGVRAMCFSPSGDWIATAGADHRALVFRVLRRRDGGSGGQPAQRMAAGGLMSLLGTTPEGGSVSSSKVGQLADVPMDWTVRLVDETPFRVLSGHVGEVVALSWAPDDSVLLTGSADGTVRSWRPRKGSECTGVFEHGGRVTSVSWDPASTRGVRRGGRFLSGCMDGKLRIFSLNNEEAEAEVRTERPVTAVAFAPGGATFVAGLVGGSVKFYRTEGMVQERAAECRRHGLRHSASY-----IKPVRRLSVGTS-GRNKGDAIAR--------------------RKGSMSSSAAIGVSPT-EERVTGIFFRPQTEESLNDGATGGAVESFGNEIEGEVSSQCAPGVVESTADDLPFIMSPARMHEQQSTDEHNASAGDDVLQQRRPRAPSSTVPKSRSDSRLASGREDANLWAGS-RTDILVSTNDSRTRVLDAGKPGGVAVRFKLKGHNSDGVQGRHILACYSEDGELVISGSANGYVHVWPASPAAATTSSMRAVAWSNNREREGHERILVCEGKVAVPCAVFAPDNVAHSLGGESTRIIVTGDSEGTIRVF 2868
A++LA P P ++P+ G + + GE D AV EAV +PSKW+L N+ETGQ+++A F D +L+ P+ + P + W ++R + RP+LLP +G + + SG SP R + S P ++ S ST+ S A TF L N+ Q+L +H GGVRAM FSPSG ++AT G D R VFRV +RR + G+ + AA + G V Q + V ++ RLVD+ P RVL+GHV VVAL+WA D+ LLTGS+DGTVR W P +G+EC+ V+EHGG VTSV+W+P G GGRFL+GCMD ++R+FSL++ E E V +ER VTAVAF PGG +F AG + G+V+FYR E M E ECRRHG RHSA+ PVRRLSVGT GR+ G R ++ S A V T EERVTG+ FRP T+ G E G+ + + G ST +M E + AG +V+ AP ++D + A+G NLW D+LVSTND+R+R+L +G+ G V V FKLKGH+++G GRH A YS+DG L++SG+ +G VHVWP T ++V WS+ RE GHER VC+ +V VP A FAP +VA +LGG S+R+IVTGD+EG ++F
Sbjct: 17 ASNLAKQPPAESPRAVSSLKPDTSDGATFESYLSYKPSHGE----DTLAVYEAVSDPSKWLLKNKETGQEVEATAFADT--LLARRPAPQ---WATVSPRLGSHSHGSRGWPRLQRHKA---PAFQRPTLLPPSNGDVAYFPLAPAGPLTPPSLQLGFSSLSGRASPLRFGARSPVSGQSFSRPRCGSNSHGRSNSDSTTSSVILSVDAPPTFKLRNMSTTQLLPRLHPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRRQTLALGEGSPNAAAVAV---------GLPVDRGMSRQPSSVCVEG--RLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPG---GEAHGGRFLTGCMDARIRLFSLDSPEVEQSVLSERAVTAVAFCPGGQSFAAGGIAGNVEFYRMENMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTGDGRSNGAGGDRVXXXXXXXXXXXXXXXXXXXXXNTLGSRAGARVPGTVEERVTGLCFRPPTK---------GPAELAGDCSDSDGEEHRLSGASRSTG---------GKMGENSQEVAPSPRAGGEVV------AP-------QADEKDANGS--GNLWVERLEADLLVSTNDNRSRILVSGERG-VTVGFKLKGHSTEGELGRHTAARYSDDGNLIVSGATDGSVHVWPTPT---TPPGTKSVTWSSGRE--GHERARVCDKRVGVPVAFFAPASVAKNLGGTSSRVIVTGDNEGNCKIF 734
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Match: UPI000C1D5FE9 (WD repeat-containing protein YMR102C-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D5FE9) HSP 1 Score: 107 bits (266), Expect = 4.650e-20 Identity = 75/239 (31.38%), Postives = 104/239 (43.51%), Query Frame = 1
Query: 1276 LDVHAGGVRAMCFSPSGDWIATAGADHRALVFRVLRRRDGGSGGQPAQRMAAGGLMSLLGTTPEGGSVSSSKVGQLADVPMDWTVRLVDETPFRVLSGHVGEVVALSWAPDDSVLLTGSADGTVRSWRPRKGSECTGVFEHGGRVTSVSWDPASTRGVRRGGRFLSGCMDGKLRIFSLNNEEAEAEVRTERPVTAVAFAPGGATFVAGLVGGSVKFYRTEGMVQERAAECRRHGLRHSA 1992
+ H G +R M FSP G ++A+ G D ++ V + EG S S K V + + ++E P GH +V+ L+W+ D LL+ S D TVR WR EC GVF H VT V ++PA FLSG +DGK+RIF +N VTA+ + P G FV G + G+ +FY T G E AE G + S+
Sbjct: 221 ISAHNGLIRIMKFSPDGQYLASGGEDGIVCIWHV----------NSIDASTSTAECKFGSQDMEGPSSSQRKKSSHPSVIIPQRIFHIEEEPLHKFHGHASDVLDLAWSTTDH-LLSSSMDKTVRLWRVGS-DECLGVFHHSNYVTCVQFNPADEN------YFLSGSIDGKVRIFGVNKRRVVHWANVRDLVTAICYQPNGKGFVVGSLSGTCRFYETSGDEIELKAEINIQGRKKSS 441
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Match: UPI0008A0F863 (uncharacterized protein LOC103976536 isoform X2 n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=UPI0008A0F863) HSP 1 Score: 100 bits (250), Expect = 2.630e-18 Identity = 67/215 (31.16%), Postives = 107/215 (49.77%), Query Frame = 1
Query: 1285 HAGGVRAMCFSPSGDWIATAGADHRALVFRVLRRRDGGSGGQPAQRMAAGGLMSLLGTTPEGGSVSSSKVGQLADVPMDWTVRLVDETPFRVLSGHVGEVVALSWAPDDSVLLTGSADGTVRSWRPRKGSE-CTGVFEHGGRVTSVSWDPASTRGVRRGGRFLSGCMDGKLRIFSLNNEEAEAEVRTERPVTAVAFAPGGATFVAGLVGGSVKFY 1926
H G +RAM FSPSG ++A+ G D +++++ D + + G +G +G + K +A V + + ++E+P L GH +++ LSW+ + LLT S D TVR W+ GS+ C +F+H VT V ++P R F+SG +DGK+RI+ + V TAV + P G FV G + G+ +FY
Sbjct: 255 HKGLIRAMKFSPSGRYLASGGEDCVVRIWQIIEAEDS------CKCVTTDGSSRFVGKV-KGTKLVEGKASNVAPVFIPKRIFKIEESPLLELRGHTSDILDLSWS-QSNFLLTSSKDKTVRLWKV--GSDGCLKIFQHNNYVTCVQFNPVEDR------LFISGSIDGKVRIWDILENRVIDWVEIGDMATAVCYRPDGKGFVVGSIKGNCRFY 453
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Match: A0A843W6R8_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843W6R8_COLES) HSP 1 Score: 101 bits (252), Expect = 3.080e-18 Identity = 76/237 (32.07%), Postives = 107/237 (45.15%), Query Frame = 1
Query: 1285 HAGGVRAMCFSPSGDWIATAGADHRALVFRVLRRRDGGSGGQPAQRMAAGGLMSLLGTTPEGGSVSSSKVGQLADVPMDWTVRLVDETPFRVLSGHVGEVVALSWAPDDSVLLTGSADGTVRSWRPRKGSECTGVFEHGGRVTSVSWDPASTRGVRRGGRFLSGCMDGKLRIFSLNNEEAEAEVRTERPVTAVAFAPGGATFVAGLVGGSVKFYRTEGMVQERAAECRRHGLRHSAS 1995
H G + M FSP G ++AT G D V+RV+ + L + LG E + S+ L V + ++ETP GH +V+A SW+ + LLT S D TVR W+ C GVF H VT V ++PA G F+SG +DGK+RI+ ++ V +TAV F G FV G + GS +FY G + AE G + +S
Sbjct: 404 HKGSIWTMKFSPDGRYLATGGEDCVVRVWRVVEMET-----------SCKVLSANLGKVKEFKLIPKSRCFDLGMVVIPRKAFKLEETPLHEFHGHTSDVLAFSWSKSNC-LLTSSKDKTVRLWQVGL-DFCLGVFRHNNYVTCVQFNPADD------GYFISGSIDGKVRIWRISESRVVDWVDIRDIITAVCFRSNGQGFVVGSITGSCRFYYLSGNGLQLDAELNIQGKKKVSS 621
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Match: A0A804I5N0_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804I5N0_MUSAM) HSP 1 Score: 100 bits (250), Expect = 4.270e-18 Identity = 67/215 (31.16%), Postives = 107/215 (49.77%), Query Frame = 1
Query: 1285 HAGGVRAMCFSPSGDWIATAGADHRALVFRVLRRRDGGSGGQPAQRMAAGGLMSLLGTTPEGGSVSSSKVGQLADVPMDWTVRLVDETPFRVLSGHVGEVVALSWAPDDSVLLTGSADGTVRSWRPRKGSE-CTGVFEHGGRVTSVSWDPASTRGVRRGGRFLSGCMDGKLRIFSLNNEEAEAEVRTERPVTAVAFAPGGATFVAGLVGGSVKFY 1926
H G +RAM FSPSG ++A+ G D +++++ D + + G +G +G + K +A V + + ++E+P L GH +++ LSW+ + LLT S D TVR W+ GS+ C +F+H VT V ++P R F+SG +DGK+RI+ + V TAV + P G FV G + G+ +FY
Sbjct: 255 HKGLIRAMKFSPSGRYLASGGEDCVVRIWQIIEAEDS------CKCVTTDGSSRFVGKV-KGTKLVEGKASNVAPVFIPKRIFKIEESPLLELRGHTSDILDLSWS-QSNFLLTSSKDKTVRLWKV--GSDGCLKIFQHNNYVTCVQFNPVEDR------LFISGSIDGKVRIWDILENRVIDWVEIGDMATAVCYRPDGKGFVVGSIKGNCRFY 453
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Match: UPI000C1D5A50 (uncharacterized protein LOC111367803 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D5A50) HSP 1 Score: 99.8 bits (247), Expect = 9.170e-18 Identity = 70/239 (29.29%), Postives = 108/239 (45.19%), Query Frame = 1
Query: 1276 LDVHAGGVRAMCFSPSGDWIATAGADHRALVFRVLRRRDGGSGGQPAQRMAAGGLMSLLGTTPEGGSVSSSKVGQLADVPMDWTVRLVDETPFRVLSGHVGEVVALSWAPDDSVLLTGSADGTVRSWRPRKGSECTGVFEHGGRVTSVSWDPASTRGVRRGGRFLSGCMDGKLRIFSLNNEEAEAEVRTERPVTAVAFAPGGATFVAGLVGGSVKFYRTEGMVQERAAECRRHGLRHSA 1992
+ H G + M FSP G ++A+ G D ++RV + + G + EG S S K V + + ++E PF + GH +++ L+W+ + LL+ S D TVR W+ EC G+F H VT V ++P F+SG +DGK+RIF + + VTA+ + P G FV G + G+ +FY T G E AE G + S+
Sbjct: 220 ISAHHGLIWTMKFSPDGQYLASGGEDGVVCIWRVSSIDASCNDAE-----CKFGCQDM-----EGPSSSQRKKSSHPSVIIPERIFHIEEEPFHMFHGHTSDILDLAWSTTNH-LLSSSMDNTVRLWQVGS-DECLGIFHHSYYVTCVQFNPGDEN------YFISGSIDGKVRIFGVTKKRVVHWANARDVVTAICYKPDGKGFVVGSLSGTCRFYETSGDELELKAEINIQGRKKSS 440
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Match: A0A3L6QE02_PANMI (WD repeat-containing protein 44-like n=6 Tax=Panicum TaxID=4539 RepID=A0A3L6QE02_PANMI) HSP 1 Score: 99.4 bits (246), Expect = 1.210e-17 Identity = 73/258 (28.29%), Postives = 123/258 (47.67%), Query Frame = 1
Query: 1285 HAGGVRAMCFSPSGDWIATAGADHRALVFRVLRRRDGGS---GGQPAQRMAAGGLMSLLGTTPEGGSVSSSKVGQLADVPMDWTVRLVDETPFRVLSGHVGEVVALSWAPDDSVLLTGSADGTVRSWRPRKGSECT-GVFEHGGRVTSVSWDPASTRGVRRGGRFLSGCMDGKLRIFSLNNEEAEAEVRTERPVTAVAFAPGGATFVAGLVGGSVKFYRTEGMVQERAAECRRHGLRHSASYIKPVRRLSVGTSGRNK 2046
H G +R M FSPSG ++A+ G D +++++ + G P +++ + ++ + LA +P + ETP R GH +++ ++W+ D LLT S D TVR W+P G +C VF+H VT V ++P R F+SG +DGK+RI+ + + T VTA+++ P G F+ G + G+ +FY G + E G + SA+ + + L + TS N+
Sbjct: 251 HKGSIRVMKFSPSGWYLASGGEDCVVRIWQIIEVKASPKLYKGEDPYEKVEKVQVFKT--------NIGKGQNHALAVIPKK--AFRISETPLREFHGHTSDILDMTWSKSD-YLLTSSKDKTVRLWKP--GCDCCLAVFKHKDYVTCVQFNPLDER------YFISGSLDGKVRIWDVLDRRVTDWADTRNIVTALSYQPDGKGFIVGTIAGACRFYNQSGESIQLEREVFVQGKKKSAA--RRINSLKLCTSDSNR 487
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Match: A0A484N6F9_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484N6F9_9ASTE) HSP 1 Score: 99.0 bits (245), Expect = 1.280e-17 Identity = 64/216 (29.63%), Postives = 96/216 (44.44%), Query Frame = 1
Query: 1285 HAGGVRAMCFSPSGDWIATAGADHRALVFRVLRRRDGGSGGQPAQRMAAGGLMSLLGTTPEGGSVSSSKVGQLADVPMDWTVRLVDETPFRVLSGHVGEVVALSWAPDDSVLLTGSADGTVRSWRPRKGSECTGVFEHGGRVTSVSWDPASTRGVRRGGRFLSGCMDGKLRIFSLNNEEAEAEVRTERPVTAVAFAPGGATFVAGLVGGSVKFYRT 1932
H G +R M FS G ++A+ G D V+ V +L + G + SK + V + V + E+P GH V+ LSW+ + LL+ S D TVR W+ EC GVF H VT V ++PA F+SGC+DGK+R++ + + VTA+ + P G F++G + G +FY T
Sbjct: 203 HTGMIRTMKFSHDGQYLASGGEDGVVRVWSVEL---------------------VLASNFFGSELERSKKFSHSSVEIPEKVFQIKESPVHEFHGHTSSVLDLSWSSTTNCLLSSSKDNTVRLWKVGS-DECLGVFHHNNYVTCVQFNPADEN------LFISGCIDGKVRVWHVTEKRVADWADVHDIVTAICYQPNGKGFISGSISGVCRFYET 390
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Match: UPI0009E5FE42 (F-box/WD-40 repeat-containing protein At5g21040-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E5FE42) HSP 1 Score: 99.0 bits (245), Expect = 1.690e-17 Identity = 70/217 (32.26%), Postives = 109/217 (50.23%), Query Frame = 1
Query: 1276 LDVHAGGVRAMCFSPSGDWIATAGADHRALVFRVLRRRDGGSGGQPAQRMAAGGLMSLLGTTPEGGSVSSSKVGQLADVPMDWTVRLVDETPFRVLSGHVGEVVALSWAPDDSVLLTGSADGTVRSWRPRKGSECTGVFEHGGRVTSVSWDPASTRGVRRGGRFLSGCMDGKLRIFSLNNEEAEAEVRTERPVTAVAFAPGGATFVAGLVGGSVKFY 1926
+ H G +R M FSPSG +IA+ G D V R+ + R+ + + ++ A G + G S+S K A + + + ETPF+ GH G+++ LSW+ D L+T S D TVR W+ EC VF+H VT + ++P R F+SG +DGK+RI+ ++ + V VT++ P G FV G + G+ +FY
Sbjct: 251 IKAHKGLIRTMKFSPSGCYIASGGED---CVVRIWQIRELQAFCKCSK---ADGSPNFFGKVDSSKSLSGRKGADSAPIVIPKKGFRIVETPFQEFRGHTGDILDLSWSNSDC-LITSSMDKTVRMWKVGF-CECLKVFQHTDYVTCIQFNPVDER------YFVSGSIDGKVRIWGVSENQVVDWVDIRDIVTSLCCRPDGKGFVVGSINGNCRFY 453
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Match: A0A1S3VYH1_VIGRR (WD repeat-containing protein 44 n=6 Tax=Vigna TaxID=3913 RepID=A0A1S3VYH1_VIGRR) HSP 1 Score: 97.8 bits (242), Expect = 3.580e-17 Identity = 66/236 (27.97%), Postives = 112/236 (47.46%), Query Frame = 1
Query: 1285 HAGGVRAMCFSPSGDWIATAGADHRALVFRVLRRRDGGSGGQPAQRMAAGGLMSLLGTTPEGGSVSSSKVGQLADVPMDWTVRLVDETPFRVLSGHVGEVVALSWAPDDSVLLTGSADGTVRSWRPRKGSECTGVFEHGGRVTSVSWDPASTRGVRRGGRFLSGCMDGKLRIFSLNNEEAEAEVRTERPVTAVAFAPGGATFVAGLVGGSVKFYRTEGMVQERAAECRRHGLRHSA 1992
H G + M FSP+G ++A+ G D ++RV + S + G S S K + V + + V+E+P GH +V+ L+W+ D+ LL+ S+D TVR W+ +EC VF H VT + ++P F+SGC+DGK+RI+ ++ E ++A+++ P G FV G + G+ +FY G + A+ R +G + ++
Sbjct: 221 HEGLIWTMKFSPNGQYLASGGEDGVIRIWRVTSLNT--------SSICFNAEDSAISKVKHGSSGSQQKQSSQSFVVLPNKILKVEESPLHEFYGHTSDVLDLAWSNSDT-LLSSSSDKTVRLWKIGC-NECRRVFRHKDYVTCIQFNPVDEN------FFISGCIDGKVRIWGIHEERVVDWADIRDVISAISYRPDGQGFVVGSLAGTCRFYVASGKHFQLDAQMRVNGKKRTS 440 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig280.7651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig280.7651.1 >prot_H-paniculata_contig280.7651.1 ID=prot_H-paniculata_contig280.7651.1|Name=mRNA_H-paniculata_contig280.7651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=869bp MGPIAHQRYGCWSAQAPPPLPVRRHSETKAARAKNSDGVIDSTGERQSRGback to top mRNA from alignment at H-paniculata_contig280:1625..5440+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig280.7651.1 ID=mRNA_H-paniculata_contig280.7651.1|Name=mRNA_H-paniculata_contig280.7651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3816bp|location=Sequence derived from alignment at H-paniculata_contig280:1625..5440+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig280:1625..5440+ >mRNA_H-paniculata_contig280.7651.1 ID=mRNA_H-paniculata_contig280.7651.1|Name=mRNA_H-paniculata_contig280.7651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5214bp|location=Sequence derived from alignment at H-paniculata_contig280:1625..5440+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |