prot_H-paniculata_contig27996.7649.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27996.7649.1
Unique Nameprot_H-paniculata_contig27996.7649.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Match: A0A7S3NLA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLA4_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.740e-11
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    6 GKLDEAEPLYRKAVEIGDEVLGPQHPDLATWLNNLATLVRDRG 48
            GK DEA+PL ++A+EIG+E LGP HPDL +WLNNLA L+ ++G
Sbjct:    1 GKYDEAKPLVQRAIEIGEESLGPNHPDLVSWLNNLAVLLINQG 43          
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Match: D8LLM3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM3_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 2.810e-10
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    6 GKLDEAEPLYRKAVEIGDEVLGPQHPDLATWLNNLATLVRDRG 48
            G+  EA+PLY +A+E+G++ LGP HPDLATWLNN A L+R +G
Sbjct:    8 GEDTEADPLYLRAIEVGEKKLGPDHPDLATWLNNQAVLLRKQG 50          
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Match: A0A6H5L045_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L045_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 6.180e-8
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    4 ISGKLDEAEPLYRKAVEIGDEVLGPQHPDLATWLNNLATLVR 45
            + GK  EA+PLY +A++IG ++LGP HPDLA WLNN A L++
Sbjct:    8 LGGKYAEADPLYLRAIDIGKKMLGPDHPDLAAWLNNRAGLLK 49          
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.960e-7
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    4 ISGKLDEAEPLYRKAVEIGDEVLGPQHPDLATWLNNLATLVR 45
            + G   EA+P   +A+EIG++VLGP+HPDLA WLNN A L+R
Sbjct:  642 LEGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLR 683          
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.040e-7
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    3 LISGKLDEAEPLYRKAVEIGDEVLGPQHPDLATWLNNLA 41
            +  GK +EA+PLY +AVEIG++ LGP HP LA WLNN A
Sbjct:    5 VFQGKYEEADPLYLRAVEIGEKTLGPDHPTLAVWLNNKA 43          
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 54.3 bits (129), Expect = 3.330e-7
Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    6 GKLDEAEPLYRKAVEIGDEVLGPQHPDLATWLNNLATL 43
            GK +EAEPLY++A++I + VLGP HP +AT LNNLA L
Sbjct:    5 GKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42          
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.690e-7
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    6 GKLDEAEPLYRKAVEIGDEVLGPQHPDLATWLNNLATLVR 45
            GK D+AEPLY +A+ IG++ LGP+HPDLA WLN  A L++
Sbjct:   13 GKYDDAEPLYVRAIAIGEKSLGPEHPDLAVWLNYWAGLLK 52          
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Match: UPI000AC66F0C (tetratricopeptide repeat-containing protein n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI000AC66F0C)

HSP 1 Score: 57.0 bits (136), Expect = 5.880e-7
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    7 KLDEAEPLYRKAVEIGDEVLGPQHPDLATWLNNLATLVRDRG 48
            + DEAEPLYR+A+E+   +LG QHPD+AT LNNLA L R +G
Sbjct:    1 RYDEAEPLYRQALEMRKRLLGEQHPDVATSLNNLAGLYRSQG 42          
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Match: UPI000AF9E6D4 (tetratricopeptide repeat-containing protein n=5 Tax=Acidithiobacillus thiooxidans TaxID=930 RepID=UPI000AF9E6D4)

HSP 1 Score: 56.6 bits (135), Expect = 8.980e-7
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 LVLISGKLDEAEPLYRKAVEIGDEVLGPQHPDLATWLNNL 40
            L+   GKL EAEPLY++A++I ++VLGP+HPD AT LNNL
Sbjct:   39 LIQARGKLAEAEPLYQRALKIKEKVLGPEHPDTATGLNNL 78          
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Match: A0A7S3NLU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLU4_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.500e-6
Identity = 21/32 (65.62%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    6 GKLDEAEPLYRKAVEIGDEVLGPQHPDLATWL 37
            GK +EA+PLY +A+EIG++ LGP HP+LATWL
Sbjct:   13 GKYNEAKPLYERAIEIGEKTLGPNHPNLATWL 44          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27996.7649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3NLA4_9STRA3.740e-1162.79Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
D8LLM3_ECTSI2.810e-1060.47Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5L045_9PHAE6.180e-857.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJK0_9PHAE1.960e-757.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0C4_9PHAE2.040e-761.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0013D295283.330e-763.16tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5K4D0_9PHAE3.690e-760.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000AC66F0C5.880e-761.90tetratricopeptide repeat-containing protein n=1 Ta... [more]
UPI000AF9E6D48.980e-762.50tetratricopeptide repeat-containing protein n=5 Ta... [more]
A0A7S3NLU4_9STRA1.500e-665.63Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13374TPR_10coord: 81..116
e-value: 1.3E-8
score: 34.4
NoneNo IPR availablePFAMPF13424TPR_12coord: 5..64
e-value: 1.2E-13
score: 51.2
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 6..125
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..133
e-value: 2.2E-40
score: 140.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27996contigH-paniculata_contig27996:758..2850 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27996.7649.1mRNA_H-paniculata_contig27996.7649.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27996 758..2850 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27996.7649.1 ID=prot_H-paniculata_contig27996.7649.1|Name=mRNA_H-paniculata_contig27996.7649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
LVLISGKLDEAEPLYRKAVEIGDEVLGPQHPDLATWLNNLATLVRDRGDP
EGAEPLQRRAVSIGESVLGPSHPDLGAQVINLASLLNAKGNLEEAEALFR
RGIATLEAAHGRDHPDVAAVLSHFAALLQEQVTCF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf