prot_H-paniculata_contig27980.7646.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27980.7646.1
Unique Nameprot_H-paniculata_contig27980.7646.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 1.190e-40
Identity = 67/156 (42.95%), Postives = 105/156 (67.31%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGRSVECDSLFAALGAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVIKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKPNIASEV 156
            W     + LV N G  Q K++PCVFR     VV MI+ ++VDD++V G   +C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++++RFDV++ S +PA+  ADLGP+REDEE  + PVR A+GS++W+S  ++P+++  V
Sbjct:   39 WGYYAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 193          
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 1.110e-38
Identity = 67/156 (42.95%), Postives = 105/156 (67.31%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGRSVECDSLFAALGAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVIKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKPNIASEV 156
            W     + LV N G  Q K++PCVFR     VV MI+ ++VDD++V G   +C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++++RFDV++ S +PA+  ADLGP+REDEE  + PVR A+GS++W+S  ++P+++  V
Sbjct:  118 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVQSTSRIPATPGADLGPQREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 272          
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.050e-38
Identity = 67/156 (42.95%), Postives = 105/156 (67.31%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGRSVECDSLFAALGAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVIKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKPNIASEV 156
            W     + LV N G  Q K++PCVFR     VV MI+ ++VDD++V G   +C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++++RFDV++ S +PA+  ADLGP+REDEE  + PVR A+GS++W+S  ++P+++  V
Sbjct:  182 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 336          
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 2.130e-37
Identity = 67/156 (42.95%), Postives = 105/156 (67.31%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGRSVECDSLFAALGAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVIKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKPNIASEV 156
            W     + LV N G  Q K++PCVFR     VV MI+ ++VDD++V G   +C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++++RFDV++ S +PA+  ADLGP+REDEE  + PVR A+GS++W+S  ++P+++  V
Sbjct:  530 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 684          
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.230e-37
Identity = 67/156 (42.95%), Postives = 105/156 (67.31%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGRSVECDSLFAALGAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVIKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKPNIASEV 156
            W     + LV N G  Q K++PCVFR     VV MI+ ++VDD++V G   +C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++++RFDV++ S +PA+  ADLGP+REDEE  + PVR A+GS++W+S  ++P+++  V
Sbjct:  895 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 1049          
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.270e-37
Identity = 67/156 (42.95%), Postives = 105/156 (67.31%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGRSVECDSLFAALGAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVIKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKPNIASEV 156
            W     + LV N G  Q K++PCVFR     VV MI+ ++VDD++V G   +C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++++RFDV++ S +PA+  ADLGP+REDEE  + PVR A+GS++W+S  ++P+++  V
Sbjct: 1274 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 1428          
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.280e-37
Identity = 67/156 (42.95%), Postives = 105/156 (67.31%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGRSVECDSLFAALGAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVIKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKPNIASEV 156
            W     + LV N G  Q K++PCVFR     VV MI+ ++VDD++V G   +C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++++RFDV++ S +PA+  ADLGP+REDEE  + PVR A+GS++W+S  ++P+++  V
Sbjct: 1294 WGYHAADTLVEN-GFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 1448          
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.280e-37
Identity = 67/156 (42.95%), Postives = 105/156 (67.31%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGRSVECDSLFAALGAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVIKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKPNIASEV 156
            W     + LV N G  Q K++PCVFR     VV MI+ ++VDD++V G   +C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++++RFDV++ S +PA+  ADLGP+REDEE  + PVR A+GS++W+S  ++P+++  V
Sbjct: 1437 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 1591          
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 3.010e-37
Identity = 67/156 (42.95%), Postives = 104/156 (66.67%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGRSVECDSLFAALGAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVIKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKPNIASEV 156
            W   + + LV N G  Q K++PCVFR     VV MI+ ++VDD++V G   +C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D+++ RFDV++ S +PA+  ADLGP REDEE  + PVR A+GS++W+S  ++P+++  V
Sbjct:  928 WGYHVADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIMIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVARFDVQSTSRIPATPGADLGPEREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 1082          
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 4.140e-37
Identity = 66/153 (43.14%), Postives = 104/153 (67.97%), Query Frame = 0
Query:    2 WSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGRSVECDSLFAALGAEFQTTR-GELKWYLGCAFWRDIVRGVVRITQRTFVDTVIKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKPNIA 153
            W     + LV N G  Q K++PCVFR     VV MI+ ++VDD++V G   +C+ L A+L  +F T   GE +W+ GCA  RD+  G +RI+Q  ++D++++RFDV++ S +PA+  ADLGP+REDEE  + PVR A+GS++W+S  ++P+++
Sbjct: 1004 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVRKAIGSMMWVSTFSRPDVS 1155          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27980.7646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRS6_9PHAE1.190e-4042.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JVD4_9PHAE1.110e-3842.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTL3_9PHAE2.050e-3842.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K164_9PHAE2.130e-3742.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE2.230e-3742.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE2.270e-3742.95Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE2.280e-3742.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE2.280e-3742.95Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5K1N9_9PHAE3.010e-3742.95Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQW4_9PHAE4.140e-3743.14Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27980contigH-paniculata_contig27980:2729..3199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27980.7646.1mRNA_H-paniculata_contig27980.7646.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27980 2642..3232 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27980.7646.1 ID=prot_H-paniculata_contig27980.7646.1|Name=mRNA_H-paniculata_contig27980.7646.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MWSKRLVEVLVNNVGMTQSKSNPCVFRLEKRGVVDMILCVHVDDVIVTGR
SVECDSLFAALGAEFQTTRGELKWYLGCAFWRDIVRGVVRITQRTFVDTV
IKRFDVETKSNLPASQAADLGPRREDEELSDKPVRSAVGSLIWLSGMTKP
NIASEV*
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