mRNA_H-paniculata_contig27979.7644.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE) HSP 1 Score: 100 bits (249), Expect = 4.600e-22 Identity = 64/146 (43.84%), Postives = 81/146 (55.48%), Query Frame = 1
Query: 1 TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEDIILRDLPAEYERVRIASCEKRDFNLADIRHMASTMYTDYLSRPNTASGGSDDGR-------RNHISCFFCGKRGHLKRDCTARNTGQGVTGEHKK 417
TKEARR C KL T M+SG+DP DFL MD R RLE+M + IPDE YED++LR L EY +R S + R F L +IR MY D LSR + SG S GR +++ C C + GH +C G+G + KK
Sbjct: 75 TKEARRACRYKLFHTTMKSGEDPSDFLAKMDDLRLRLEDMGEKIPDESYEDVLLRALSKEYYFIRQTSHKDRTFGLTEIRTTMVNMYIDELSRKS--SGPSVAGRGVAMSAESSNVQCRNCQEFGHYANECRKHGKGKGNRRQGKK 218
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Match: A0A6H5JXA1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA1_9PHAE) HSP 1 Score: 55.1 bits (131), Expect = 3.200e-6 Identity = 36/134 (26.87%), Postives = 66/134 (49.25%), Query Frame = 1
Query: 1 TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEDIILRDLPAEYERVRIASCEKRDFNLADIRHMASTMYTDYLSRPNTASGGSDDGRRNHIS-------CFFCGKRGHLKRDCTAR 381
T E R D L T+M+ G++P+DF R +LE+M + I D R++DI ++ +Y+ +++ F++ ++ ++ D R T G GR ++ CF C + GH++R+C+ R
Sbjct: 128 TDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTK--GQIAGRGFAMATKTSGPICFECNEPGHVRRNCSNR 259
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.410e-6 Identity = 37/134 (27.61%), Postives = 66/134 (49.25%), Query Frame = 1
Query: 1 TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEDIILRDLPAEYERVRIASCEKRDFNLADIRHMASTMYTDYLSRPNTASGGSDDGRRNHIS-------CFFCGKRGHLKRDCTAR 381
T EA R D L T+M+ G++P+DF R +LE+M + I D R++DI ++ +Y+ +++ F++ ++ ++ D R T G GR ++ CF C + GH++R+C R
Sbjct: 147 TDEAIRAELDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTK--GQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNR 278
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE) HSP 1 Score: 54.3 bits (129), Expect = 8.150e-6 Identity = 36/134 (26.87%), Postives = 65/134 (48.51%), Query Frame = 1
Query: 1 TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEDIILRDLPAEYERVRIASCEKRDFNLADIRHMASTMYTDYLSRPNTASGGSDDGRRNHIS-------CFFCGKRGHLKRDCTAR 381
T E R D L T+M+ G++P+DF R +LE+M + I D R++DI ++ +Y+ +++ F++ ++ ++ D R T G GR ++ CF C + GH++R+C R
Sbjct: 128 TDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTK--GQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNR 259
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE) HSP 1 Score: 54.3 bits (129), Expect = 8.320e-6 Identity = 36/134 (26.87%), Postives = 65/134 (48.51%), Query Frame = 1
Query: 1 TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEDIILRDLPAEYERVRIASCEKRDFNLADIRHMASTMYTDYLSRPNTASGGSDDGRRNHIS-------CFFCGKRGHLKRDCTAR 381
T E R D L T+M+ G++P+DF R +LE+M + I D R++DI ++ +Y+ +++ F++ ++ ++ D R T G GR ++ CF C + GH++R+C R
Sbjct: 128 TDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTK--GQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNR 259
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE) HSP 1 Score: 54.3 bits (129), Expect = 8.630e-6 Identity = 36/134 (26.87%), Postives = 65/134 (48.51%), Query Frame = 1
Query: 1 TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEDIILRDLPAEYERVRIASCEKRDFNLADIRHMASTMYTDYLSRPNTASGGSDDGRRNHIS-------CFFCGKRGHLKRDCTAR 381
T E R D L T+M+ G++P+DF R +LE+M + I D R++DI ++ +Y+ +++ F++ ++ ++ D R T G GR ++ CF C + GH++R+C R
Sbjct: 128 TDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTK--GQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNR 259
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE) HSP 1 Score: 54.3 bits (129), Expect = 8.630e-6 Identity = 36/134 (26.87%), Postives = 65/134 (48.51%), Query Frame = 1
Query: 1 TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEDIILRDLPAEYERVRIASCEKRDFNLADIRHMASTMYTDYLSRPNTASGGSDDGRRNHIS-------CFFCGKRGHLKRDCTAR 381
T E R D L T+M+ G++P+DF R +LE+M + I D R++DI ++ +Y+ +++ F++ ++ ++ D R T G GR ++ CF C + GH++R+C R
Sbjct: 128 TDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTK--GQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNR 259
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Match: A0A6H5JTQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ0_9PHAE) HSP 1 Score: 54.3 bits (129), Expect = 8.820e-6 Identity = 36/134 (26.87%), Postives = 65/134 (48.51%), Query Frame = 1
Query: 1 TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEDIILRDLPAEYERVRIASCEKRDFNLADIRHMASTMYTDYLSRPNTASGGSDDGRRNHIS-------CFFCGKRGHLKRDCTAR 381
T E R D L T+M+ G++P+DF R +LE+M + I D R++DI ++ +Y+ +++ F++ ++ ++ D R T G GR ++ CF C + GH++R+C R
Sbjct: 128 TDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTK--GQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNR 259
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE) HSP 1 Score: 54.3 bits (129), Expect = 8.820e-6 Identity = 36/134 (26.87%), Postives = 65/134 (48.51%), Query Frame = 1
Query: 1 TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEDIILRDLPAEYERVRIASCEKRDFNLADIRHMASTMYTDYLSRPNTASGGSDDGRRNHIS-------CFFCGKRGHLKRDCTAR 381
T E R D L T+M+ G++P+DF R +LE+M + I D R++DI ++ +Y+ +++ F++ ++ ++ D R T G GR ++ CF C + GH++R+C R
Sbjct: 128 TDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTK--GQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNR 259
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Match: A0A6H5K7P0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P0_9PHAE) HSP 1 Score: 53.9 bits (128), Expect = 9.910e-6 Identity = 36/134 (26.87%), Postives = 64/134 (47.76%), Query Frame = 1
Query: 1 TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEDIILRDLPAEYERVRIASCEKRDFNLADIRHMASTMYTDYLSRPNTASGGSDDGRRNHIS-------CFFCGKRGHLKRDCTAR 381
T E R D L T+M+ G++P+DF R +LE+M + I D R++DI ++ +Y+ +++ F + ++ ++ D R T G GR ++ CF C + GH++R+C R
Sbjct: 128 TDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFEVQQMQATVRNIFLDERMRKRTK--GEIAGRVFAMATKTSGPICFECNEPGHVRRNCPNR 259 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27979.7644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27979.7644.1 >prot_H-paniculata_contig27979.7644.1 ID=prot_H-paniculata_contig27979.7644.1|Name=mRNA_H-paniculata_contig27979.7644.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp TKEARRECHDKLHTTMMQSGDDPEDFLFVMDGYRERLEEMEQPIPDERYEback to top mRNA from alignment at H-paniculata_contig27979:24..440+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27979.7644.1 ID=mRNA_H-paniculata_contig27979.7644.1|Name=mRNA_H-paniculata_contig27979.7644.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=417bp|location=Sequence derived from alignment at H-paniculata_contig27979:24..440+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27979:24..440+ >mRNA_H-paniculata_contig27979.7644.1 ID=mRNA_H-paniculata_contig27979.7644.1|Name=mRNA_H-paniculata_contig27979.7644.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at H-paniculata_contig27979:24..440+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |