mRNA_H-paniculata_contig27970.7642.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 298 bits (762), Expect = 7.490e-92 Identity = 175/479 (36.53%), Postives = 271/479 (56.58%), Query Frame = 1
Query: 19 GRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNILVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTE--YRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
G + + W+FK KR G++ +YKAR VAQGFSQ+ G D+ + APVA++S++ I+ +L A+ D+EL MDV A L+ +EEE+F+K PPGFP P + + C Q+GR W L + +G RS+ D ++F E I V V V DL IA + LG + +LG+E++RD R TI++ Q +Y+ +L R+ + + + T + ++ +S P + +D++ YR +GSLMYA+IG RPDV+Y V ++ M++P + KR+ RYL + + + +G N +G+EGF DA+W + R+S +GYVF ++GGA+S S+KQ +VA SSTEAEYVA A K ++ R LG + TTL+ DN+SA+ L+K H +TKHI +R+H IR+ + G + + Y T D AD+L K L++ K +++R
Sbjct: 70 GANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAI-VAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQ-----YDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLTRPKMEKMR 540
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 302 bits (774), Expect = 3.740e-88 Identity = 173/476 (36.34%), Postives = 269/476 (56.51%), Query Frame = 1
Query: 31 IRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSR--DEGRETNILVTVYVGDLVIAGHLGSLSR--------------------VLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMF-GRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
+ +KW+FK KR DG + R KAR VAQG+SQ G D+ ++ APVA+ +++ V ++ + D EL MDV A L+ +EE++F+K P GF C QS R WN +D+FL G R+ DPC+Y + + ++V VYV DL+IA + + R +LG++V+RD +N +TI Q +++ VL R+ +EC+ V TP E MK ++ +LK +Y+ +G L YASIG RPD++ V ++ M P ++ + KR+ RYL + D G+++ G +S D L GF DA+WA D++ RKST+GYVFK+ +S S++Q +VA S TEAEYVA +A + I+LR L + F T +FEDN+ A+ L+K H +TKHI +++H +R+ + + V+ L+Y T + +AD+L KGL + + ++LR
Sbjct: 820 VGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGFINRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLK--------DYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGLPRPQFEKLR 1287
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 289 bits (739), Expect = 2.960e-87 Identity = 169/481 (35.14%), Postives = 269/481 (55.93%), Query Frame = 1
Query: 10 LSAGRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNI-LVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
L R A+ KW+FK K DGS+ R+KAR VAQGFSQ G D+ E +PV R ++ V +L Q +L MDV AA L+ +E+E+++K P GF + + + C QS R WN+ LD+ L IG ++ +DPC+Y ++G NI +V ++V D+++AG +G L +LG++V ++ + I Q +Y ++K+YG + C+ V TP + K+ SA + EL N E++ VGSL+Y S RPD+ + V+ A+ +P E ++ KRIFRYL + + G+++ +N + GF DA+WA D+ RKST+GY F++NG A+S S+KQ VA S+ AEYVA A + +++R LL + T++EDN+SA+ +SK H ++KHI ++++ +R+ + + L + Y TG LAD+ KG+ K + ++LR
Sbjct: 183 LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDG---NIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAK--VWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLV---SAMEDSELF-----NKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLR 649
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL) HSP 1 Score: 300 bits (768), Expect = 4.810e-87 Identity = 182/484 (37.60%), Postives = 268/484 (55.37%), Query Frame = 1
Query: 10 LSAGRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNILVTVYVGDLVIA--------------------GHLGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTE---YRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGC-RGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
L GR AI +KW+FK K +G + RYKAR VA+GF Q G DF E APVA+ +++ I+ SL AQ+ L MDV A L+ ++EE+++K P G+ P C QS R WN T+D+F+ IG + D C+Y R++ + V +YV DL++A LG L LG+EV+RD ++ +++ Q +V VL ++G +C+ V TP + +K++ K HD + YR VG+LMY +G RPD+A V ++ DP + KR+ RYL +P GI F S+D L G+ DA+WA D+E R+ST+GYV LNGG IS S+KQR VA SSTEAEY+A EA + ++L+ + +G G+ T+FEDN+ A+ L+K H +TKHI +R+H +RE + +G + L+Y T + LAD++ K L+ + LR
Sbjct: 901 LPQGRKAISSKWVFKVKETAEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFTSIRIILSLAAQYKLVLHQMDVKTAFLNGLLDEEIYMKQPDGYIDPKYPNHACKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDS--ATMFVVIYVDDLILACNNKDLLAATKRALSERFEMSDLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLT------KSMCEGGCKHDETMKDVPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSG-SSDGELIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKSFMCELGEDSGNGALTVFEDNQGAIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCPTQEMLADLMTKPLAAAQFDALR 1375
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A6G0HFF8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HFF8_LARCR) HSP 1 Score: 281 bits (720), Expect = 4.400e-86 Identity = 171/480 (35.62%), Postives = 256/480 (53.33%), Query Frame = 1
Query: 10 LSAGRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNILVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
L R I ++W+FK K DG V RYK R VA+G+SQ G D+ E +PV R S++ + S Q++ + MDV A L+ +EEE++++ P G+ P + + C QS R W+ T + + IG +ST+DPC++ R+ ++ VYV DL++ +G LS +LGI V +D N+++ + Q Y+ VL++YG D+ V TPA+ +K+ + P N Y+ IVGSL+YA++ RPD+A V ++ P + KRI RYL + +L + + R S L GF DA+WA D + R+STTG +F L GGA+S S+KQ VA S+ EAEYVA +A + +L LL +G T + EDN+ A+ ++K H +TKHI +R+H IRE + G + L+Y T D ADIL K L+K K + LR
Sbjct: 35 LPKDRKPIGSRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDYDETFSPVVRFSSIRTLLSFAVQNNLHVHQMDVVTAFLNGHLEEEIYMEQPDGYIKPGQEHLVCKLKKSIYGLKQSPRCWSKTFTESMKDIGFNQSTSDPCVFV---RARQELEILAVYVDDLILITESLESMTELKVALKKKYKMKDMGELSYILGISVIQDKTNNSVYLHQKHYIEAVLQKYGMDKANPVTTPADANVKLQKDDGVSNPV--------NPGTYQSIVGSLLYAAMATRPDIAQAVSAVSKFNAKPNTAHMTAVKRILRYLKGTINLALKYQR-SESETLLGFSDADWAGDQDDRRSTTGNIFLLGGGAVSWLSKKQNTVALSTAEAEYVALSQAAQECTWLTRLLSDLGMDAT-PTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQNGQIQLQYCPTEDMKADILTKPLAKQKFEYLR 501
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 295 bits (754), Expect = 1.890e-85 Identity = 170/480 (35.42%), Postives = 267/480 (55.62%), Query Frame = 1
Query: 10 LSAGRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNILVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
L R A+ KW+FK K DGS+ R+KAR VAQGFSQ G D+ E +PV R + V +L Q +L MDV AA L+ +E+E+++K P GF + + + C QS R WN+ LD+ L IG ++ +DPC+Y ++G +V ++V D+++AG +G L +LG++V ++ + I Q +Y ++K+YG + C+ V TP + K+ SA + EL N EY+ VGSL+Y S RPD+ + V+ A+ +P E ++ KRIFRYL + + G+++ +N + GF DA+WA D+ RKST+GY F++NG A+S S+KQ VA S+ EAEYVA A + +++R LL + T++EDN+SA+ +SK H ++KHI +++H +R+ + + L + Y TG LAD+ KG+ K + ++LR
Sbjct: 797 LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDG--DIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAK--VWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLV---SAIEDSELF-----NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLR 1263
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 278 bits (712), Expect = 1.360e-84 Identity = 173/487 (35.52%), Postives = 257/487 (52.77%), Query Frame = 1
Query: 19 GRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLY---FSRDEGRETNILVTVYVGDLV---------------IAGHL-----GSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKM--KISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHG----LEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLRN 1371
G I +KW+ K KR DG+V R+KAR VAQG+SQ G ++ E+ +PVAR S++ + +L +H+ E+ MDV A L+ +E ++++ P GF C QS R WN TLD FL G ++S D C+Y D G + +++ VYV D++ + H G + +LG+ ++RD T+ ISQ Y+ VL R+G C+ + TP E + E DK NL Y+ +G L Y S RPD++ V + M +P +E ++ KR+ RY+ + + G+ F ND L G+ DA WA DV+ R+ST+GYVFK+ +S CS+KQ V S+TEAEYVA +A + I++R LL +G TT++EDN+ A+ +SK H +TKHI VR+H +RE + + + Y T LADI+ KGL+K QRLR+
Sbjct: 54 GCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDK----------NL--YQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRS 528
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A7D9IQ29_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IQ29_PARCT) HSP 1 Score: 281 bits (720), Expect = 3.490e-84 Identity = 166/477 (34.80%), Postives = 265/477 (55.56%), Query Frame = 1
Query: 31 IRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFS---RDEGRETNILVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLRN 1371
+ ++W+ K KRKEDGS+ R+KAR VAQG+SQ KG D+ E+ +PVAR ++L + +L ++D E+ MDV A L+ ++ +++++ P GF P + C QS R WN+TLD +L G ++S D C+Y +D GR + +++ V V D++ + G + +LG+ ++RD TISQ +YV VL ++G + C+ V TP E K S + D+ F+ ++ Y+ +G L Y S+ RPD++ V ++ M P ++ + KR+ RYL + D G+ + N L G+ D++WA D+ R+ST+GYVF++ +S S++QR VA SSTEAEY+A A + I+L+ LL VGF R T+FEDN+ + L+K H +TKHI + H +RE + + + Y +T D ADIL KGL++ ++LR+
Sbjct: 213 VGSRWVLKVKRKEDGSIDRFKARVVAQGYSQTKGADYDEVFSPVARHTSLRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQPEGFVNPDKPDYLCKLQKSIYGLKQSARCWNDTLDGYLKSRGYRKSGADGCIYVKSVKKDGGRISFVILGVCVDDIIPVSNDIQMVNSEKKALSERFKMDDRGEVHYLLGMLIKRDREARVTTISQRNYVERVLSKFGMESCKPVSTPLEPGTKFSELSNEDEKFDTQT--------YQQAIGCLTYLSVISRPDISAAVGALSQFMAKPSKDHWIGVKRVLRYLKGTLDYGLKYSADENPT-LVGYSDSDWAGDINTRRSTSGYVFQVANSTVSWSSKRQRTVAKSSTEAEYIALSLATQEAIWLQRLLYDVGFKIRKPITIFEDNQGTIELAKNAKYHNRTKHIDICHHFVRERVQSKEINVVYCRTDDMKADILTKGLARSSYEKLRD 680
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT) HSP 1 Score: 291 bits (746), Expect = 3.500e-84 Identity = 168/481 (34.93%), Postives = 264/481 (54.89%), Query Frame = 1
Query: 19 GRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFS---RDEGRETNILVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLRN 1371
G+ + ++W+FK K DGSV R+KAR VAQG+SQ +G D+ EI +PV R +++ + ++ D+E+ MDV A L ++E +F+K P G+ C Q+ R WN+ +D FL+ G +S DPC+Y R G+ +++ +YV D++ + +G +S VLG+ V+R+ T+TI+Q Y+ VLKR+G EC+ V TP E K + D P +++ EY+ +G L YA+ RPD+A V ++ M P ++ + KR+ RY+ + G+ F N+ L G+ DA+W DVE R+ST+GYVF++ IS CS++Q V+ S+TEAEY+A A + ++LR LL +G +T+FEDN+ A+ LSK H +TKHI V +H IRE + ++ +KY +T + LAD++ K L KV +R R+
Sbjct: 854 GKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGYTKSNADPCIYIKSIKRKNGKIDFVILALYVDDILWFSNNTEMLKKEKEALAKRFQVEDMGEVSYVLGMSVKRNREARTLTINQPKYLEGVLKRFGMQECKAVSTPLEPGRKFESLSENDTPIDVR--------EYQMAIGCLTYATNATRPDLAAAVGILSKYMARPGKDHWQGVKRVLRYVKGTLHSGLTFTAHGNNPVLYGYADADWGGDVETRRSTSGYVFQIQNNTISWCSKRQASVSRSTTEAEYIALSTACQEAVWLRRLLSDIGLKQDVPSTIFEDNQGAIELSKNPKFHNRTKHIDVSFHFIREQVNRNIVCVKYGRTENMLADVMTKALPKVSFERFRD 1326
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 291 bits (746), Expect = 5.500e-84 Identity = 174/473 (36.79%), Postives = 271/473 (57.29%), Query Frame = 1
Query: 31 IRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNILVTVYVGDLVIAG-------------------HLGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFG--CRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRL 1365
+ +K++F+ K +G + YKAR VAQGF+Q+ G DF E APVA+++++ ++ +L A++D+EL MDV A L+ +EEE++++ PPG P + + C QSGR ++ + L +GL RS D C+++ R+E +L+ + V D IAG LG + +LGIEVRRD T+++SQ +Y+ +L R+ + + + TP + +S + P + + + + YR +GSLMYA++G RPD+AY V ++ M++P R + KR+FRYL+ + + + FG ++ G+EGF DA+W E R S +GYVF L+GGA+S ++KQ +VA SSTEAEY+A A K ++LR LL V R L DNKSA+ L+K H +TKHI +R+H IRE + G + L+Y +T D ADI K L ++K + L
Sbjct: 966 VGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKN---IPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTD--GVEGFSDADWGS-AEHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETVENGQVILQYRRTEDMPADIFTKVLPRIKVEHL 1432 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27970.7642.1 >prot_H-paniculata_contig27970.7642.1 ID=prot_H-paniculata_contig27970.7642.1|Name=mRNA_H-paniculata_contig27970.7642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp MKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQback to top mRNA from alignment at H-paniculata_contig27970:443..1943- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27970.7642.1 ID=mRNA_H-paniculata_contig27970.7642.1|Name=mRNA_H-paniculata_contig27970.7642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1501bp|location=Sequence derived from alignment at H-paniculata_contig27970:443..1943- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27970:443..1943- >mRNA_H-paniculata_contig27970.7642.1 ID=mRNA_H-paniculata_contig27970.7642.1|Name=mRNA_H-paniculata_contig27970.7642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1434bp|location=Sequence derived from alignment at H-paniculata_contig27970:443..1943- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |