mRNA_H-paniculata_contig27970.7642.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig27970.7642.1
Unique NamemRNA_H-paniculata_contig27970.7642.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 298 bits (762), Expect = 7.490e-92
Identity = 175/479 (36.53%), Postives = 271/479 (56.58%), Query Frame = 1
Query:   19 GRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNILVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTE--YRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
            G   + + W+FK KR   G++ +YKAR VAQGFSQ+ G D+ +  APVA++S++ I+ +L A+ D+EL  MDV  A L+  +EEE+F+K PPGFP P +  + C          Q+GR W   L    + +G  RS+ D  ++F      E  I V V V DL IA +                    LG +  +LG+E++RD R  TI++ Q +Y+  +L R+   + + + T  +    ++  +S   P +     +D++    YR  +GSLMYA+IG RPDV+Y V   ++ M++P    +   KR+ RYL  + +  + +G   N +G+EGF DA+W    + R+S +GYVF ++GGA+S  S+KQ +VA SSTEAEYVA   A K  ++ R  LG +       TTL+ DN+SA+ L+K    H +TKHI +R+H IR+ +  G + + Y  T D  AD+L K L++ K +++R
Sbjct:   70 GANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAI-VAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQ-----YDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLTRPKMEKMR 540          
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 302 bits (774), Expect = 3.740e-88
Identity = 173/476 (36.34%), Postives = 269/476 (56.51%), Query Frame = 1
Query:   31 IRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSR--DEGRETNILVTVYVGDLVIAGHLGSLSR--------------------VLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMF-GRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
            + +KW+FK KR  DG + R KAR VAQG+SQ  G D+ ++ APVA+ +++  V ++  + D EL  MDV  A L+  +EE++F+K P GF         C          QS R WN  +D+FL   G  R+  DPC+Y  +     +   ++V VYV DL+IA +   + R                    +LG++V+RD +N  +TI Q +++  VL R+  +EC+ V TP E  MK       ++  +LK        +Y+  +G L YASIG RPD++  V   ++ M  P ++ +   KR+ RYL  + D G+++ G +S D  L GF DA+WA D++ RKST+GYVFK+    +S  S++Q +VA S TEAEYVA  +A +  I+LR L   + F     T +FEDN+ A+ L+K    H +TKHI +++H +R+ + + V+ L+Y  T + +AD+L KGL + + ++LR
Sbjct:  820 VGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGFINRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLK--------DYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGLPRPQFEKLR 1287          
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 289 bits (739), Expect = 2.960e-87
Identity = 169/481 (35.14%), Postives = 269/481 (55.93%), Query Frame = 1
Query:   10 LSAGRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNI-LVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
            L   R A+  KW+FK K   DGS+ R+KAR VAQGFSQ  G D+ E  +PV R  ++  V +L  Q   +L  MDV AA L+  +E+E+++K P GF +  + +  C          QS R WN+ LD+ L  IG  ++ +DPC+Y   ++G   NI +V ++V D+++AG                     +G L  +LG++V ++     + I Q +Y   ++K+YG + C+ V TP +   K+    SA +  EL      N  E++  VGSL+Y S   RPD+ + V+  A+   +P  E ++  KRIFRYL  + + G+++   +N   + GF DA+WA D+  RKST+GY F++NG A+S  S+KQ  VA S+  AEYVA   A +  +++R LL  +        T++EDN+SA+ +SK    H ++KHI ++++ +R+ + +  L + Y  TG  LAD+  KG+ K + ++LR
Sbjct:  183 LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDG---NIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAK--VWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLV---SAMEDSELF-----NKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLR 649          
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL)

HSP 1 Score: 300 bits (768), Expect = 4.810e-87
Identity = 182/484 (37.60%), Postives = 268/484 (55.37%), Query Frame = 1
Query:   10 LSAGRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNILVTVYVGDLVIA--------------------GHLGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTE---YRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGC-RGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
            L  GR AI +KW+FK K   +G + RYKAR VA+GF Q  G DF E  APVA+ +++ I+ SL AQ+   L  MDV  A L+  ++EE+++K P G+  P      C          QS R WN T+D+F+  IG  +   D C+Y  R++     + V +YV DL++A                      LG L   LG+EV+RD ++  +++ Q  +V  VL ++G  +C+ V TP +  +K++      K        HD   +   YR  VG+LMY  +G RPD+A  V   ++   DP    +   KR+ RYL  +P  GI F   S+D  L G+ DA+WA D+E R+ST+GYV  LNGG IS  S+KQR VA SSTEAEY+A  EA +  ++L+  +  +G     G+ T+FEDN+ A+ L+K    H +TKHI +R+H +RE + +G + L+Y  T + LAD++ K L+  +   LR
Sbjct:  901 LPQGRKAISSKWVFKVKETAEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFTSIRIILSLAAQYKLVLHQMDVKTAFLNGLLDEEIYMKQPDGYIDPKYPNHACKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDS--ATMFVVIYVDDLILACNNKDLLAATKRALSERFEMSDLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLT------KSMCEGGCKHDETMKDVPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSG-SSDGELIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKSFMCELGEDSGNGALTVFEDNQGAIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCPTQEMLADLMTKPLAAAQFDALR 1375          
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A6G0HFF8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HFF8_LARCR)

HSP 1 Score: 281 bits (720), Expect = 4.400e-86
Identity = 171/480 (35.62%), Postives = 256/480 (53.33%), Query Frame = 1
Query:   10 LSAGRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNILVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
            L   R  I ++W+FK K   DG V RYK R VA+G+SQ  G D+ E  +PV R S++  + S   Q++  +  MDV  A L+  +EEE++++ P G+  P + +  C          QS R W+ T  + +  IG  +ST+DPC++      R+   ++ VYV DL++                       +G LS +LGI V +D  N+++ + Q  Y+  VL++YG D+   V TPA+  +K+   +    P         N   Y+ IVGSL+YA++  RPD+A  V   ++    P     +  KRI RYL  + +L + + R S    L GF DA+WA D + R+STTG +F L GGA+S  S+KQ  VA S+ EAEYVA  +A +   +L  LL  +G      T + EDN+ A+ ++K    H +TKHI +R+H IRE +  G + L+Y  T D  ADIL K L+K K + LR
Sbjct:   35 LPKDRKPIGSRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDYDETFSPVVRFSSIRTLLSFAVQNNLHVHQMDVVTAFLNGHLEEEIYMEQPDGYIKPGQEHLVCKLKKSIYGLKQSPRCWSKTFTESMKDIGFNQSTSDPCVFV---RARQELEILAVYVDDLILITESLESMTELKVALKKKYKMKDMGELSYILGISVIQDKTNNSVYLHQKHYIEAVLQKYGMDKANPVTTPADANVKLQKDDGVSNPV--------NPGTYQSIVGSLLYAAMATRPDIAQAVSAVSKFNAKPNTAHMTAVKRILRYLKGTINLALKYQR-SESETLLGFSDADWAGDQDDRRSTTGNIFLLGGGAVSWLSKKQNTVALSTAEAEYVALSQAAQECTWLTRLLSDLGMDAT-PTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQNGQIQLQYCPTEDMKADILTKPLAKQKFEYLR 501          
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 295 bits (754), Expect = 1.890e-85
Identity = 170/480 (35.42%), Postives = 267/480 (55.62%), Query Frame = 1
Query:   10 LSAGRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNILVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLR 1368
            L   R A+  KW+FK K   DGS+ R+KAR VAQGFSQ  G D+ E  +PV R   +  V +L  Q   +L  MDV AA L+  +E+E+++K P GF +  + +  C          QS R WN+ LD+ L  IG  ++ +DPC+Y   ++G     +V ++V D+++AG                     +G L  +LG++V ++     + I Q +Y   ++K+YG + C+ V TP +   K+    SA +  EL      N  EY+  VGSL+Y S   RPD+ + V+  A+   +P  E ++  KRIFRYL  + + G+++   +N   + GF DA+WA D+  RKST+GY F++NG A+S  S+KQ  VA S+ EAEYVA   A +  +++R LL  +        T++EDN+SA+ +SK    H ++KHI +++H +R+ + +  L + Y  TG  LAD+  KG+ K + ++LR
Sbjct:  797 LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDG--DIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAK--VWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLV---SAIEDSELF-----NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLR 1263          
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT)

HSP 1 Score: 278 bits (712), Expect = 1.360e-84
Identity = 173/487 (35.52%), Postives = 257/487 (52.77%), Query Frame = 1
Query:   19 GRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLY---FSRDEGRETNILVTVYVGDLV---------------IAGHL-----GSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKM--KISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHG----LEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLRN 1371
            G   I +KW+ K KR  DG+V R+KAR VAQG+SQ  G ++ E+ +PVAR S++  + +L  +H+ E+  MDV  A L+  +E ++++  P GF         C          QS R WN TLD FL   G ++S  D C+Y      D G  + +++ VYV D++               +  H      G +  +LG+ ++RD    T+ ISQ  Y+  VL R+G   C+ + TP E     +    E  DK          NL  Y+  +G L Y S   RPD++  V   +  M +P +E ++  KR+ RY+  + + G+ F    ND      L G+ DA WA DV+ R+ST+GYVFK+    +S CS+KQ  V  S+TEAEYVA  +A +  I++R LL  +G      TT++EDN+ A+ +SK    H +TKHI VR+H +RE +    + + Y  T   LADI+ KGL+K   QRLR+
Sbjct:   54 GCNVIGSKWVMKIKRDADGNVDRHKARLVAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGFDK----------NL--YQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTKKIFQRLRS 528          
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A7D9IQ29_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IQ29_PARCT)

HSP 1 Score: 281 bits (720), Expect = 3.490e-84
Identity = 166/477 (34.80%), Postives = 265/477 (55.56%), Query Frame = 1
Query:   31 IRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFS---RDEGRETNILVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLRN 1371
            + ++W+ K KRKEDGS+ R+KAR VAQG+SQ KG D+ E+ +PVAR ++L  + +L  ++D E+  MDV  A L+  ++ +++++ P GF  P +    C          QS R WN+TLD +L   G ++S  D C+Y     +D GR + +++ V V D++   +                     G +  +LG+ ++RD      TISQ +YV  VL ++G + C+ V TP E   K S   + D+ F+ ++        Y+  +G L Y S+  RPD++  V   ++ M  P ++ +   KR+ RYL  + D G+ +    N   L G+ D++WA D+  R+ST+GYVF++    +S  S++QR VA SSTEAEY+A   A +  I+L+ LL  VGF  R   T+FEDN+  + L+K    H +TKHI +  H +RE +    + + Y +T D  ADIL KGL++   ++LR+
Sbjct:  213 VGSRWVLKVKRKEDGSIDRFKARVVAQGYSQTKGADYDEVFSPVARHTSLRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQPEGFVNPDKPDYLCKLQKSIYGLKQSARCWNDTLDGYLKSRGYRKSGADGCIYVKSVKKDGGRISFVILGVCVDDIIPVSNDIQMVNSEKKALSERFKMDDRGEVHYLLGMLIKRDREARVTTISQRNYVERVLSKFGMESCKPVSTPLEPGTKFSELSNEDEKFDTQT--------YQQAIGCLTYLSVISRPDISAAVGALSQFMAKPSKDHWIGVKRVLRYLKGTLDYGLKYSADENPT-LVGYSDSDWAGDINTRRSTSGYVFQVANSTVSWSSKRQRTVAKSSTEAEYIALSLATQEAIWLQRLLYDVGFKIRKPITIFEDNQGTIELAKNAKYHNRTKHIDICHHFVRERVQSKEINVVYCRTDDMKADILTKGLARSSYEKLRD 680          
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 291 bits (746), Expect = 3.500e-84
Identity = 168/481 (34.93%), Postives = 264/481 (54.89%), Query Frame = 1
Query:   19 GRTAIRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFS---RDEGRETNILVTVYVGDLVIAGH--------------------LGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLRN 1371
            G+  + ++W+FK K   DGSV R+KAR VAQG+SQ +G D+ EI +PV R +++  + ++    D+E+  MDV  A L   ++E +F+K P G+         C          Q+ R WN+ +D FL+  G  +S  DPC+Y     R  G+   +++ +YV D++   +                    +G +S VLG+ V+R+    T+TI+Q  Y+  VLKR+G  EC+ V TP E   K  +    D P +++        EY+  +G L YA+   RPD+A  V   ++ M  P ++ +   KR+ RY+  +   G+ F    N+  L G+ DA+W  DVE R+ST+GYVF++    IS CS++Q  V+ S+TEAEY+A   A +  ++LR LL  +G      +T+FEDN+ A+ LSK    H +TKHI V +H IRE +   ++ +KY +T + LAD++ K L KV  +R R+
Sbjct:  854 GKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGYTKSNADPCIYIKSIKRKNGKIDFVILALYVDDILWFSNNTEMLKKEKEALAKRFQVEDMGEVSYVLGMSVKRNREARTLTINQPKYLEGVLKRFGMQECKAVSTPLEPGRKFESLSENDTPIDVR--------EYQMAIGCLTYATNATRPDLAAAVGILSKYMARPGKDHWQGVKRVLRYVKGTLHSGLTFTAHGNNPVLYGYADADWGGDVETRRSTSGYVFQIQNNTISWCSKRQASVSRSTTEAEYIALSTACQEAVWLRRLLSDIGLKQDVPSTIFEDNQGAIELSKNPKFHNRTKHIDVSFHFIREQVNRNIVCVKYGRTENMLADVMTKALPKVSFERFRD 1326          
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 291 bits (746), Expect = 5.500e-84
Identity = 174/473 (36.79%), Postives = 271/473 (57.29%), Query Frame = 1
Query:   31 IRTKWIFKRKRKEDGSVTRYKARPVAQGFSQMKGEDFFEISAPVARMSTLCIVFSLVAQHDFELEGMDVGAA*LSAPVEEELFVKLPPGFPLPPETYRFC-------AACQSGRNWNNTLDDFLVGIGLQRSTTDPCLYFSRDEGRETNILVTVYVGDLVIAG-------------------HLGSLSRVLGIEVRRDHRNDTITISQGSYVCEVLKRYGFDECQGVPTPAEGKMKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQAARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEWAEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKGTIYLRDLLGSVGFG--CRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHGIREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRL 1365
            + +K++F+ K   +G +  YKAR VAQGF+Q+ G DF E  APVA+++++ ++ +L A++D+EL  MDV  A L+  +EEE++++ PPG   P + +  C          QSGR ++  +   L  +GL RS  D C+++ R+E     +L+ + V D  IAG                    LG +  +LGIEVRRD    T+++SQ +Y+  +L R+   + + + TP +    +S  +    P + + + +     YR  +GSLMYA++G RPD+AY V   ++ M++P R  +   KR+FRYL+ + +  + FG  ++  G+EGF DA+W    E R S +GYVF L+GGA+S  ++KQ +VA SSTEAEY+A   A K  ++LR LL  V      R    L  DNKSA+ L+K    H +TKHI +R+H IRE +  G + L+Y +T D  ADI  K L ++K + L
Sbjct:  966 VGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKN---IPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTD--GVEGFSDADWGS-AEHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETVENGQVILQYRRTEDMPADIFTKVLPRIKVEHL 1432          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27970.7642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y9ZVS1_9AGAM7.490e-9236.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7M6DPI8_9CNID3.740e-8836.34Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A7D9HZ03_PARCT2.960e-8735.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8K1FHK1_PYTOL4.810e-8737.60Uncharacterized protein n=3 Tax=Pythium oligandrum... [more]
A0A6G0HFF8_LARCR4.400e-8635.63Copia protein Gag-int-pol protein Copia VLP protei... [more]
A0A6S7HEL0_PARCT1.890e-8535.42Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9JFU5_PARCT1.360e-8435.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9IQ29_PARCT3.490e-8434.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HNY1_PARCT3.500e-8434.93Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A401GN13_9APHY5.500e-8436.79Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27970contigH-paniculata_contig27970:443..1943 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score166.0
Seed ortholog evalue2.1e-38
Seed eggNOG ortholog7029.ACYPI24114-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3BI7U@33208,3CTS1@33213,3SQRW@50557,41WYJ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Exons4
Model size1371
Cds size717
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27970.7642.1prot_H-paniculata_contig27970.7642.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig27970 443..1209 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929846.7332523-CDS-H-paniculata_contig27970:442..11001622929846.7332523-CDS-H-paniculata_contig27970:442..1100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27970 443..1100 -
1691481037.2284117-CDS-H-paniculata_contig27970:442..11001691481037.2284117-CDS-H-paniculata_contig27970:442..1100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27970 443..1100 -
1622929846.7532206-CDS-H-paniculata_contig27970:1150..12091622929846.7532206-CDS-H-paniculata_contig27970:1150..1209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27970 1151..1209 -
1691481037.2375479-CDS-H-paniculata_contig27970:1150..12091691481037.2375479-CDS-H-paniculata_contig27970:1150..1209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27970 1151..1209 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929846.7686224-UTR-H-paniculata_contig27970:1209..13641622929846.7686224-UTR-H-paniculata_contig27970:1209..1364Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig27970 1210..1364 -
1691481037.2453337-UTR-H-paniculata_contig27970:1209..13641691481037.2453337-UTR-H-paniculata_contig27970:1209..1364Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig27970 1210..1364 -
1622929846.7830703-UTR-H-paniculata_contig27970:1421..15811622929846.7830703-UTR-H-paniculata_contig27970:1421..1581Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig27970 1422..1581 -
1691481037.2531722-UTR-H-paniculata_contig27970:1421..15811691481037.2531722-UTR-H-paniculata_contig27970:1421..1581Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig27970 1422..1581 -
1622929846.7996488-UTR-H-paniculata_contig27970:1604..19431622929846.7996488-UTR-H-paniculata_contig27970:1604..1943Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig27970 1605..1943 -
1691481037.2663558-UTR-H-paniculata_contig27970:1604..19431691481037.2663558-UTR-H-paniculata_contig27970:1604..1943Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig27970 1605..1943 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig27970.7642.1

>prot_H-paniculata_contig27970.7642.1 ID=prot_H-paniculata_contig27970.7642.1|Name=mRNA_H-paniculata_contig27970.7642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp
MKISAPESADKPFELKSLGHDNLTEYRGIVGSLMYASIGIRPDVAYGVHQ
AARRMKDPYREDFSTCKRIFRYLSTSPDLGIMFGRKSNDHGLEGFVDAEW
AEDVEGRKSTTGYVFKLNGGAISLCSRKQRLVAWSSTEAEYVAGGEAGKG
TIYLRDLLGSVGFGCRGSTTLFEDNKSAMNLSKGFGAHCKTKHIGVRWHG
IREWIWEGVLALKYAQTGDQLADILAKGLSKVKSQRLRN
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mRNA from alignment at H-paniculata_contig27970:443..1943-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig27970.7642.1 ID=mRNA_H-paniculata_contig27970.7642.1|Name=mRNA_H-paniculata_contig27970.7642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1501bp|location=Sequence derived from alignment at H-paniculata_contig27970:443..1943- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCAGGAGGTTATCGGCAGGGCGGACGGCGATTCGTACGAAATGGATTTT CAAGCGGAAACGGAAGGAGGACGGCAGCGTGACACGCTACAAAGCGCGAC CGGTGGCTCAAGGCTTTTCACAGATGAAGGGTGAAGATTTCTTTGAAATC AGTGCCCCCGTAGCGCGCATGTCGACTTTATGTATTGTTTTTAGTCTGGT CGCCCAGCATGATTTCGAATTAGAAGGCATGGACGTAGGTGCGGCGTAAT TGAGCGCCCCCGTAGAAGAAGAGCTGTTTGTTAAGCTACCCCCCGGGTTT CCCCTTCCTCCCGAGACATACCGTTTTTGCGCCGCCTGCGTAAAAGCCTA TACGGGTTCTAGCAGAGCGGCCGAAACTGGAATAACACTCTTGACGATTT TCTTGTTGGGATAGGACTCCAACGTTCCACTACCGACCCATGCTTGTACT TCTCTCGCGACGAAGGGAGAGAGACAAACATTCTCGTGACCGTCTATGTT GGCGACCTGGTCATCGCTGGACGTCGTGAGAAAGTAGACGAGTTCAAGCA CAACATAAGTCGGCGTTTCAGGATCGAAGACTTGGGTTCTCTCTCGCGCG TGTTGGGAATAGAAGTACGACGCGACCACCGTAATGATACCATAACTATC TCGCAGGGCAGCTACGTCTGCGAGGTACTGAAAAGATACGGTTTTGACGA GTGTCAAGGGGTACCCACCCCTGCGGAGGGAAAAATGAAGATTTCGGCAC CCGAGTCGGCCGACAAACCCTTCGAACTGAAGTCACTTGGGCAGTACTGT CGGACATAGGCGCAGGAATACAAGAAATCGACAGAGGGAGAAGTGACAAT TTAACTGAATACAGAGGCATAGTAGGATCACTCATGTACGCCTCGATAGG AATTCGACCTGATGTAGCATACGGGGTACACCAAGCAGCACGTCGTATGA AGGACCCATATCGGGAAGACTTCAGTACATGCAAGCGCATTTTTCGTTAT CTCAGTACTTCGCCTGACCTCGGCATTATGTTTGGCCGTAAGAGTAATGA TCACGGTCTGGAAGGATTCGTTGATGCCGAGTGGGCGGAAGATGTCGAGG GCCGAAAATCCACAACAGGATACGTATTCAAGCTGAACGGTGGCGCGATA AGTTTGTGCTCTAGGAAGCAACGGTTAGTTGCGTGGTCCAGTACAGAGGC AGAGTACGTTGCTGGAGGAGAAGCGGGAAAGGGGACAATATATCTTAGGG ATTTACTAGGATCGGTAGGTTTCGGATGCAGGGGGAGCACGACACTGTTT GAGGACAATAAATCAGCCATGAATCTCAGTAAGGGATTTGGTGCACACTG CAAGACAAAGCACATCGGAGTGCGCTGGCACGGAATTCGAGAGTGGATTT GGGAAGGAGTATTGGCGTTGAAATACGCGCAGACCGGCGATCAACTTGCC GACATTTTAGCGAAAGGACTAAGCAAAGTAAAGTCTCAGAGACTGAGAAA T
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Coding sequence (CDS) from alignment at H-paniculata_contig27970:443..1943-

>mRNA_H-paniculata_contig27970.7642.1 ID=mRNA_H-paniculata_contig27970.7642.1|Name=mRNA_H-paniculata_contig27970.7642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1434bp|location=Sequence derived from alignment at H-paniculata_contig27970:443..1943- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGATTTCGGCACCCGAGTCGGCCGACAAACCCTTCGAACTGAAGTC
ACTTGGGCAATGAAGATTTCGGCACCCGAGTCGGCCGACAAACCCTTCGA
ACTGAAGTCACTTGGGCATGACAATTTAACTGAATACAGAGGCATAGTAG
GATCACTCATGTACGCCTCGATAGGAATTCGACCTGATGTAGCATACGGG
GTACACCAAGCAGCACGTCGTATGAAGGACCCATATCGGGAAGACTTCAG
TACATGCAAGCGCATTTTTCGTTATCTCAGTACTTCGCCTGACCTCGGCA
TTATGTTTGGCCGTAAGAGTAATGATCACGGTCTGGAAGGATTCGTTGAT
GCCGAGTGGGCGGAAGATGTCGAGGGCCGAAAATCCACAACAGGATACGT
ATTCAAGCTGAACGGTGGCGCGATAAGTTTGTGCTCTAGGAAGCAACGGT
TAGTTGCGTGGTCCAGTACAGAGGCAGAGTACGTTGCTGGAGGAGAAGCG
GGAAAGGGGACAATATATCTTAGGGATTTACTAGGATCGGTAGGTTTCGG
ATGCAGGGGGAGCACGACACTGTTTGAGGACAATAAATCAGCCATGAATC
TCAGTAAGGGATTTGGTGCACACTGCAAGACAAAGCACATCGGAGTGCGC
TGGCACGGAATTCGAGAGTGGATTTGGGAAGGAGTATTGGCGTTGAAATA
CGCGCAGACCGGCGATCAACTTGCCGACATTTTAGCGAAAGGACTAAGCA
AAGTAAAGTCTCAGAGACTGAGAAATTGACAATTTAACTGAATACAGAGG
CATAGTAGGATCACTCATGTACGCCTCGATAGGAATTCGACCTGATGTAG
CATACGGGGTACACCAAGCAGCACGTCGTATGAAGGACCCATATCGGGAA
GACTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTACTTCGCCTGA
CCTCGGCATTATGTTTGGCCGTAAGAGTAATGATCACGGTCTGGAAGGAT
TCGTTGATGCCGAGTGGGCGGAAGATGTCGAGGGCCGAAAATCCACAACA
GGATACGTATTCAAGCTGAACGGTGGCGCGATAAGTTTGTGCTCTAGGAA
GCAACGGTTAGTTGCGTGGTCCAGTACAGAGGCAGAGTACGTTGCTGGAG
GAGAAGCGGGAAAGGGGACAATATATCTTAGGGATTTACTAGGATCGGTA
GGTTTCGGATGCAGGGGGAGCACGACACTGTTTGAGGACAATAAATCAGC
CATGAATCTCAGTAAGGGATTTGGTGCACACTGCAAGACAAAGCACATCG
GAGTGCGCTGGCACGGAATTCGAGAGTGGATTTGGGAAGGAGTATTGGCG
TTGAAATACGCGCAGACCGGCGATCAACTTGCCGACATTTTAGCGAAAGG
ACTAAGCAAAGTAAAGTCTCAGAGACTGAGAAAT
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