mRNA_H-paniculata_contig2796.7639.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Match: D7FQ44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ44_ECTSI) HSP 1 Score: 211 bits (537), Expect = 5.250e-68 Identity = 100/118 (84.75%), Postives = 106/118 (89.83%), Query Frame = 1
Query: 10 LLQTGYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILADGEGDDCVTNTYQLIGKFLALRGPDKDDHE-----HCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGELD 348
+ + GYDPKRSKVSDDKLAEFIRSA+TG++TEVPGIA RGAEILADGEGDD VTNTYQLIGKFLALRGPDK DHE HCDKFWYWLQ+KGINSNRSGIVNAIAEKVNTWIPG D
Sbjct: 1 MAEVGYDPKRSKVSDDKLAEFIRSAVTGDLTEVPGIAARGAEILADGEGDDKVTNTYQLIGKFLALRGPDKTDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWIPGIYD 118
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Match: A0A835Z4N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N7_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.510e-47 Identity = 76/116 (65.52%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 16 QTGYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILADGEGDDCVTNTYQLIGKFLALRGPDKDDH-----EHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGELD 348
+ GYDPKRSKV+D+KLAEFIR ITGE+TEVPGI + LA GEG + V NTYQLIGKFL+L+G D EHCD+FWYWL+ GI+S RSGIVNAIAEK NTWIPG D
Sbjct: 4 EAGYDPKRSKVTDEKLAEFIRQPITGELTEVPGIGPAAVKKLAAGEGSNKVANTYQLIGKFLSLKGGDDSGKTIQTIEHCDRFWYWLKEMGISSYRSGIVNAIAEKCNTWIPGIYD 119
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Match: K0QZN8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZN8_THAOC) HSP 1 Score: 156 bits (394), Expect = 3.300e-46 Identity = 72/114 (63.16%), Postives = 88/114 (77.19%), Query Frame = 1
Query: 22 GYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILADGEGDDCVTNTYQLIGKFLALRGPDKDDH-----EHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGELD 348
GYDPKRS+VSDD L +FIR+ + G+ITEVPGI A+ LA+GE D+C+TNTYQLIGKFL L+GPD DD+ EHC+KFWYWLQ K I+++RS IV AIA KVN +PG D
Sbjct: 5 GYDPKRSRVSDDSLMDFIRAQVQGDITEVPGIGPAAAKKLAEGEHDECITNTYQLIGKFLMLKGPDTDDNKVESMEHCEKFWYWLQDKQISAHRSAIVKAIAMKVNGLLPGVYD 118
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Match: A0A7S2V4V0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V0_9STRA) HSP 1 Score: 150 bits (380), Expect = 5.150e-44 Identity = 68/114 (59.65%), Postives = 90/114 (78.95%), Query Frame = 1
Query: 22 GYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILADGEGDDCVTNTYQLIGKFLALRGPDKDDHE-----HCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGELD 348
GYDPKRS +S+D LA F+R+ ITG+IT+VPGI K A LA + D+ +TN++QLIGKFL ++GPD ++ E HC+KFWY+L+SKG+NS+RSGIV+AIAEK+NT IPG D
Sbjct: 4 GYDPKRSSISEDALATFLRNPITGDITQVPGIGKAAAAALASADDDEPITNSFQLIGKFLLMKGPDTEEGEVDCVMHCNKFWYYLKSKGVNSHRSGIVHAIAEKINTMIPGIYD 117
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Match: A0A7S1ZJR7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJR7_TRICV) HSP 1 Score: 147 bits (370), Expect = 2.770e-42 Identity = 69/118 (58.47%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 10 LLQTGYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILADGEGDDCVTNTYQLIGKFLALRGPDKDDH-----EHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGELD 348
+ +TGYDP+RS+VS+D L +F+R ITGEITEVPGI A+ LA+G+ DD VTNT+QLIGKF+ L+GPD D+H EH KFW+WL K I S+RS IV AIAEK+N +PG D
Sbjct: 22 MAETGYDPRRSRVSEDTLNDFLRGKITGEITEVPGIGPAAAKRLAEGDDDDRVTNTWQLIGKFMMLKGPDDDEHKVGPGEHMQKFWHWLAEKEIKSHRSAIVKAIAEKMNQMMPGIYD 139
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Match: A0A7S2R0A3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0A3_9STRA) HSP 1 Score: 143 bits (360), Expect = 5.760e-41 Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 22 GYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILADGEGD-DCVTNTYQLIGKFLALRGPDKDDH-----EHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGELD 348
GYDP RSKVSD + +F+RS ITG++TEVPGI LA G+ + D +TNT+QLIGKFL L+GPD+DD EH +KFWYWL+ KGI S+RS IV AI EK+NT IPG D
Sbjct: 6 GYDPSRSKVSDSTMTDFLRSQITGDVTEVPGIGPAAKRALAGGDDESDRITNTFQLIGKFLMLKGPDEDDMKIDCMEHMEKFWYWLKQKGIKSHRSAIVKAIGEKINTMIPGIYD 120
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Match: A0A6U3Z2B1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z2B1_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.520e-39 Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 1
Query: 22 GYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILA---DGEGD-DCVTNTYQLIGKFLALRGPDKDDH-----EHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGELD 348
GYDP+RSKVSDD A F R A++GE+T+VPGI A+ L DGE + D VTNTYQLIGKFL L+GPD+D + EH +KFW++L+ KGI+S+RSGIV AIAEKVNT +PG D
Sbjct: 4 GYDPRRSKVSDDTFASFQRDALSGELTDVPGIGPAAAKKLGQIGDGETEFDRVTNTYQLIGKFLMLKGPDEDGNKVESVEHMEKFWWYLKQKGISSHRSGIVRAIAEKVNTMLPGIYD 121
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Match: A0A2D4C4D0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4D0_PYTIN) HSP 1 Score: 137 bits (345), Expect = 7.760e-39 Identity = 67/119 (56.30%), Postives = 86/119 (72.27%), Query Frame = 1
Query: 13 LQTGYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILADGEGDDCVTNTYQLIGKFLALR-GPDKDDH------EHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGELD 348
+ GYDP++S+V++D LA+F+R+ +TG++TEVPGI K LA GE D V NT+QLIGKFL L+ DK++ EHCD FWYWL+SKGI + RSGIV AIAEKVNT +PG D
Sbjct: 1 MSEGYDPQKSRVAEDTLADFLRAPLTGDLTEVPGIGKAAVGKLAAGEEGDRVENTFQLIGKFLMLKQSTDKNEDGLIDCAEHCDAFWYWLKSKGIQAYRSGIVMAIAEKVNTMLPGIYD 119
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Match: A0A7S0C1K8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1K8_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.210e-38 Identity = 66/110 (60.00%), Postives = 84/110 (76.36%), Query Frame = 1
Query: 22 GYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILADGEGDDCVTNTYQLIGKFLALRGPDK-DDHEHCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGELD 348
GYDPKRS+VS+ + +FIR I+GEITEVPGI A+ LA E DD VTNTYQL GKFL+L+GPDK D EH +KFWYWL+ +GI+++RS +V AIAEK+N+ + G D
Sbjct: 5 GYDPKRSRVSESTMGDFIRGEISGEITEVPGIGPAAAKKLA--ESDDQVTNTYQLFGKFLSLKGPDKVDPVEHMEKFWYWLKDQGISAHRSAVVRAIAEKMNSMMNGLYD 112
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Match: F0WQ47_9STRA (Uncharacterized protein AlNc14C194G8527 n=2 Tax=Albugo TaxID=65356 RepID=F0WQ47_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.560e-38 Identity = 63/119 (52.94%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 13 LQTGYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILADGEGDDCVTNTYQLIGKFLALRGPDKDDHE-------HCDKFWYWLQSKGINSNRSGIVNAIAEKVNTWIPGELD 348
+ GYDP++S++++D+LA+F+R+ +TG++ EVPGI LA GE +D V NTYQLIGKFL L+ D+++ E HCD FWYWL+SK I + RSGIV AIAEKVNT +PG D
Sbjct: 1 MSDGYDPQKSRIAEDRLADFLRAPLTGDLLEVPGIGSAAISKLASGEEEDRVCNTYQLIGKFLMLKKNDEENEEELIECSAHCDAFWYWLKSKQITAYRSGIVMAIAEKVNTMLPGIYD 119 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2796.7639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2796.7639.1 >prot_H-paniculata_contig2796.7639.1 ID=prot_H-paniculata_contig2796.7639.1|Name=mRNA_H-paniculata_contig2796.7639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp MLFLLQTGYDPKRSKVSDDKLAEFIRSAITGEITEVPGIAKRGAEILADGback to top mRNA from alignment at H-paniculata_contig2796:9075..11107+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2796.7639.1 ID=mRNA_H-paniculata_contig2796.7639.1|Name=mRNA_H-paniculata_contig2796.7639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2033bp|location=Sequence derived from alignment at H-paniculata_contig2796:9075..11107+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2796:9075..11107+ >mRNA_H-paniculata_contig2796.7639.1 ID=mRNA_H-paniculata_contig2796.7639.1|Name=mRNA_H-paniculata_contig2796.7639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig2796:9075..11107+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |