mRNA_H-paniculata_contig27923.7629.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig27923.7629.1
Unique NamemRNA_H-paniculata_contig27923.7629.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 193 bits (490), Expect = 5.690e-53
Identity = 126/352 (35.80%), Postives = 183/352 (51.99%), Query Frame = 2
Query:  224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMP-FVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGG----------------EKDLLAAVYSG----FRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAP--DGN--------STEYRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIG 1162
            PVA+ + +R I S+AA++   L  MDV  A+LN  +EEE+++K    F       P  V +L++A        R  + T+D+ +  IG  +  TD  +Y  RDD                  + DLLAA        F M  LG L   LG+EV RD  +G +++ Q  ++  VL ++G  +C+ V TP +  +K++    +G            YR  VG++MY+   TRPD A AV   ++   DPC   +   K + RYL A P  GI F G  +G    G+ DADWA D+E R+ST+GYVF LNG  I+W S+KQ+ V  SSTEA Y+A  EA +E V+L+     +G
Sbjct:   80 PVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGF--VDAKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDKAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTEAEYMALSEATQEAVWLKAFMRELG 428          
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 202 bits (513), Expect = 6.360e-53
Identity = 129/348 (37.07%), Postives = 188/348 (54.02%), Query Frame = 2
Query:  224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPF-VRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGG-----------------EKDLLAA---VYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDG-----NSTEYRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIGF 1165
            PV R   +R +F++AAE    +  +D+  AYLN+ ++EE++++    F   S + P  V +L+KA        R  ++TLD++L  +G  RS  ++ LY  +   G                 E ++ A    + S F M   GSLS  LG+E++RD   G +++ Q +YIR +LK YG   CR V+TP++    +   D      N T+Y+ ++GSLMY++  +RPD   AV + ++R  +P  E  +  K I RYLS    L I +  +  G    GF DADWA+D  DRKS +GY F L G+A SW S KQ +V  SSTEA YVA   A KE VYLR L   IG+
Sbjct:  904 PVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNF--ISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSSYIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY--RKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIVALSSTEAEYVALTAAAKEAVYLRRLLAEIGW 1247          
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 193 bits (491), Expect = 4.170e-51
Identity = 125/342 (36.55%), Postives = 186/342 (54.39%), Query Frame = 2
Query:  224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGGEKDLLA---------------------AVYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEG--KVKISAPDGNSTE---YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDL 1147
            PVAR   +RT+ +LAA+H  +L  MDV  A+LN  ++EE+++K    F    G    V RLR++        R  +S LD  L  +G  ++T D  +Y  +++GGE  ++A                     A+   F+MK +G L   LG++V     +  I I Q +Y + VL+R+G +  +  STPV    K+K +A D    +   Y+  VG L+Y+ST+TRPD A+AV   AR   DP  E +   K I RYL+    +G+ + G        G+ DADWA D++DRKST+GYVF+++ AAISW S+KQ  V  S+ EA Y+A   A +E V+L+ L
Sbjct:   68 PVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIE-KGKEHLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEIFIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQL 407          
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A438FG00_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=12 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FG00_VITVI)

HSP 1 Score: 186 bits (471), Expect = 1.640e-50
Identity = 118/327 (36.09%), Postives = 169/327 (51.68%), Query Frame = 2
Query:  236 MSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGGEKDLLAAVYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDGNSTE----------YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIG 1162
            MS +R +  + A  +  LE +DV  A+L+  +EE+L++ + PE     G    V +LRK+        R      D+ +  IG  R   D       D     +L   +   F MK LG+  ++LG+ + RD+ NG + +SQ  Y+++VL R+  +E + VSTP+    K+S      TE          Y   +GSLMY    TRPD A AV   +R M  P  + +   K I RYL       + F G S     +G+VDAD+A D++ RKSTTG+VF L G AISW S  Q++VT S+TEA YVAA EAGKE ++L      +G
Sbjct:    1 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYM-IQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADLVAMLRSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKL--QGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELG 324          
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME)

HSP 1 Score: 192 bits (488), Expect = 1.910e-50
Identity = 124/375 (33.07%), Postives = 192/375 (51.20%), Query Frame = 2
Query:  224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDM-PFVRRLRKARTASST----LDDILVGIGLDRSTTDSYLYF--------------------SRDDGGEKDLLAAVYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDGNSTE----------YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIGFG-CRGARHYFKTGQRLISVRDLAYAP 1240
            PV R + LR +F++AA+HD  +  +D   A+LN  ++EE+F+K    +S  SG +   ++ L   + AS      L+++L+ +GL RS  D  +YF                    S D    + +   + S  +MK +GS S VLG+ V+RD     I + Q  YI  VLKR+G D+C  V+TP++   K++      +E          Y   VGSL+Y +  TRPD +FAV+  +R  ++P    +   K + RYL      GI F  + +     G+ DADWA D++ R+ST+GYVF + GAAISW S +Q+ V  SSTEA   +A  A +E ++L  L   +  G   G + Y      +  VR+  ++P
Sbjct:  319 PVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEYSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVF--RKSAQSLTGYCDADWAGDLDQRRSTSGYVFIMQGAAISWSSHRQRTVALSSTEAELTSAVSAMQEAIWLHRLESELVHGGTEGIKMYCDNKSAIHIVRNNNFSP 691          
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A5CAL2_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5CAL2_VITVI)

HSP 1 Score: 189 bits (480), Expect = 2.530e-50
Identity = 120/331 (36.25%), Postives = 173/331 (52.27%), Query Frame = 2
Query:  224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGGEKDLLAAVYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDGNSTE----------YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIG 1162
            PV +MS +R +  + A  +  LE +DV  A+L+  +EE+L++ + PE     G    V +LRK+        R      D+ +  IG  R   D   YF   D     ++  +Y  F MK LG+  ++LG+ + RD+ NG + +SQ  Y ++VL R+  +E + +STP+    K+S      TE          Y   +GSLMY    TRPD A AV   ++ M  P  + +   K I RYL       + F G S     +G+VDAD A D++ RKSTTG+VF L G AISW S  Q++VT S+TEA YVAA EAGKE ++L      +G
Sbjct:  170 PVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYM-IQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFD--NSYIILLLY--FAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYAKKVLNRFNMNEAKPISTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSKFMSRPVKQHWEAVKWILRYLKGSLDTYLCFTGASLKL--QGYVDADXAGDIDSRKSTTGFVFTLCGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELG 493          
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 194 bits (493), Expect = 2.770e-50
Identity = 128/351 (36.47%), Postives = 188/351 (53.56%), Query Frame = 2
Query:  224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRK--------ARTASSTLDDILVGIGLDRSTTDSYLY-------------------------FSRDDGGEKDLLAAVYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVE-GKVKISAPD----GNSTEYRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIG 1162
            PV R + +R++ +LA   D+E+  MDV  A+L   + +E+++K  PE      +   V +L+K        AR  +STLD  L   G  +   DS LY                         FS D    ++   A+ + F+++ LG +S +LG+ ++RDR +  +TISQ  Y+  VLKR+  +EC+ VSTP+E GK      D     N  EY+ ++G L YV+T TRPD A AV   ++ M  P  E +   K I RY+      GITF  K       G+ DADWA+D E R+ST+GY+F+++G  ISWCS+KQ  V+ SSTEA Y+A   A +E ++LR L  +IG
Sbjct:  919 PVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMK-QPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIG 1268          
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 194 bits (493), Expect = 2.900e-50
Identity = 129/343 (37.61%), Postives = 174/343 (50.73%), Query Frame = 2
Query:  224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDG---------------GEKDLLAA----VYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDGNSTE----------YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLR 1141
            PV+R+  +RTI SLAA HD+EL  MDV  AYLN  +EE ++++L P F+P       V RL+K         R    TL   +  +G  R   D  +++ R+                 G  DL+ A    +   F M  LG L  +LGIEVRRDR    I ISQ SYI  ++ R+  DE   +S P++    +      ST           YR  VGSLMY +  TRPD  FAV   ++ M++P    +   K + RYL     L + +G  +N  G  G+ DADW    E R S +GYVF L+G AISW S+KQ +V  SSTEA Y+A   A KE ++LR
Sbjct: 1116 PVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAP-PEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKREGESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLR 1455          
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A2N9HGZ8_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HGZ8_FAGSY)

HSP 1 Score: 186 bits (471), Expect = 3.210e-50
Identity = 122/351 (34.76%), Postives = 181/351 (51.57%), Query Frame = 2
Query:  212 KSVPPVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGGE--------KDLLAA-------------VYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDGNSTE----------YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDL 1147
            K   P+ R + +R + +L A+ D ELE +DV  A+L+  +EEE+F++  PE     G    V RL+K+        R      D  ++ IG  R   D  +Y    + G          D+L A             ++  F MK LG+  ++LG+E+RRDR    + +SQ +YIR+VL+++   + + VSTP+    ++S+    + E          Y   VG LMY    TRPD A AV   +R M +P  E ++  K I RYL      GI F  +   +   G+VDAD+A +V+DR+STTGYVF L+G  I W S  Q +VT S+TEA Y+AA E  KE ++L+ L
Sbjct:   24 KGKKPIVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFME-QPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRFDSYMIPIGYTRCEYDCCVYVRILEDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGATKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPNNEEEIENMSKVPYASAVGCLMYEMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVTMSTTEAEYMAAAETAKEALWLKGL 373          
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL)

HSP 1 Score: 193 bits (490), Expect = 6.980e-50
Identity = 130/372 (34.95%), Postives = 193/372 (51.88%), Query Frame = 2
Query:  224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVK-----LAPEFSPFSGDMPFVRRL----RKARTASSTLDDILVGIGLDRSTTDSYLYFSRDDGG----------------EKDLLAAVYSG----FRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKI--SAPDGN--------STEYRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIGFGC-RGARHYFKTGQRLISV 1219
            PVA+ + +R I SLAA++   L  MDV  A+LN  ++EE+++K     + P++   +  +   R L    +  R  + T+D+ +  IG  +   D  +Y  R+D                   KDLLAA        F M  LG L   LG+EV+RD  +G +++ Q  +++ VL ++G  +C+ V TP +  +K+  S  +G            YR  VG+LMY+   TRPD A +V   ++   DPC   +   K + RYL A P  GI F G S+G    G+ DADWA D+E R+ST+GYV  LNG  ISW S+KQ+ V  SSTEA Y+A  EA +E V+L+     +G     GA   F+  Q  I++
Sbjct:  950 PVAKFTSIRIILSLAAQYKLVLHQMDVKTAFLNGLLDEEIYMKQPDGYIDPKYPNHACKLK--RALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDSATMFVVIYVDDLILACNNKDLLAATKRALSERFEMSDLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLTKSMCEGGCKHDETMKDVPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSGSSDGE-LIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKSFMCELGEDSGNGALTVFEDNQGAIAL 1318          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5D6YB57_9STRA5.690e-5335.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
W8BWJ0_CERCA6.360e-5337.07Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9KES8_PARCT4.170e-5136.55Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A438FG00_VITVI1.640e-5036.09Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C9RAA9_9HYME1.910e-5033.07POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]
A5CAL2_VITVI2.530e-5036.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9IUY0_PARCT2.770e-5036.47Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2G8RWY5_9APHY2.900e-5037.61Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A2N9HGZ8_FAGSY3.210e-5034.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8K1FHK1_PYTOL6.980e-5034.95Uncharacterized protein n=3 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27923contigH-paniculata_contig27923:278..1782 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score184.1
Seed ortholog evalue1.1e-43
Seed eggNOG ortholog164328.Phyra71619
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3QHW0@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size1374
Cds size1074
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27923.7629.1prot_H-paniculata_contig27923.7629.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig27923 513..1717 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929844.7855754-UTR-H-paniculata_contig27923:277..5121622929844.7855754-UTR-H-paniculata_contig27923:277..512Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig27923 278..512 +
1691481036.30597-UTR-H-paniculata_contig27923:277..5121691481036.30597-UTR-H-paniculata_contig27923:277..512Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig27923 278..512 +
1622929844.840265-UTR-H-paniculata_contig27923:1717..17821622929844.840265-UTR-H-paniculata_contig27923:1717..1782Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig27923 1718..1782 +
1691481036.3482854-UTR-H-paniculata_contig27923:1717..17821691481036.3482854-UTR-H-paniculata_contig27923:1717..1782Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig27923 1718..1782 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929844.799134-CDS-H-paniculata_contig27923:512..8181622929844.799134-CDS-H-paniculata_contig27923:512..818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27923 513..818 +
1691481036.3176835-CDS-H-paniculata_contig27923:512..8181691481036.3176835-CDS-H-paniculata_contig27923:512..818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27923 513..818 +
1622929844.815812-CDS-H-paniculata_contig27923:859..10531622929844.815812-CDS-H-paniculata_contig27923:859..1053Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27923 860..1053 +
1691481036.3267012-CDS-H-paniculata_contig27923:859..10531691481036.3267012-CDS-H-paniculata_contig27923:859..1053Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27923 860..1053 +
1622929844.8271291-CDS-H-paniculata_contig27923:1143..17171622929844.8271291-CDS-H-paniculata_contig27923:1143..1717Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27923 1144..1717 +
1691481036.3377912-CDS-H-paniculata_contig27923:1143..17171691481036.3377912-CDS-H-paniculata_contig27923:1143..1717Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27923 1144..1717 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig27923.7629.1

>prot_H-paniculata_contig27923.7629.1 ID=prot_H-paniculata_contig27923.7629.1|Name=mRNA_H-paniculata_contig27923.7629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=358bp
MSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGD
MPFVRRLRKARTASSTLDDILVGIGLDRSTTDSYLYFSRDDGGEKDLLAA
VYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDEC
RGVSTPVEGKVKISAPDGNSTEYRGMVGSLMYVSTRTRPDTAFAVHQAAR
RMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADD
VEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVY
LRDLRGSIGFGCRGARHYFKTGQRLISVRDLAYAPGQSTWECTGTEFESG
FGKEYWR*
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mRNA from alignment at H-paniculata_contig27923:278..1782+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig27923.7629.1 ID=mRNA_H-paniculata_contig27923.7629.1|Name=mRNA_H-paniculata_contig27923.7629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1505bp|location=Sequence derived from alignment at H-paniculata_contig27923:278..1782+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGCGCGCGGCAATGGAGGAAGAATGGGGGGCGTTGATGGAAAATGGAAC ATACGGAAGCGAAGACCCGATGAGGTTACCGGCAGGGCGGAAGGCGATTC GTACGAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGTGGCA TGCTACAAAGCGTGACTGGTGGCCCAAGGCTATTCACAGATGAAGGGTGA AGATTTCTTTGAAATCAGTGCCCCCCGTAGCTCGCATGTCGATATTACGT ACTATTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGAAGGCATGGA CGTAGATGTGGCGTATTTGAACGCCCCCGTAGAAGAAGAGCTGTTTGTGA AGCTAGCCCCCGAGTTTTCCCCTTTCTCCGGAGACATGCCGTTTGTGCGC CGCCTGCGTAAAGCCCGTACGGCCTCAAGCACTCTTGATGATATTCTTGT TGGGATAGGACTCGACCGTTCCACTACCGACTCATACTTATACTTCTCCC GCGACGATGGGGGAGAAAAAGACCTTCTGGCGGCCGTCTATGTTGACGAC CTGGTCATTGCTGGGCGTCGTGAGAAAGTAAGTCGGGTTTCAGGATGAAA GCCTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACGTGACCG CCCCAATGGTGCCATAACCATCTCGCAGGGTAGCTACATCCGCGAGGTGC TGAAAAGATACGGTTTTGACGAGTGTCGAGGAGTATCCACCCCTGTAGAG GGAAAAGTGAAGATTTCGGCACCCGAGTCGGCCGACAAGCCCTCCGAACT GAAGTCACTTGGAGCTGTACTGTCGGACATAGGCGCAGGAGTGAAAGAAA GCAGCAGAGGGAGAAGTGGCAATTCAACTGAATACAGAGGCATGGTAGGA TCACTCATGTACGTCTCGACACGAACTAGACCCGATACAGCATTCGCGGT ACACCAAGCAGCACGTCGTATGGAGGACCCATGTGGGGAAGATTTCAGTA CATACAAGTGCATTTGTCGTTATCTCAGTGCTGTGCCTGGCCTCGGCATT ACGTTCGGCGGTAAGAGTAATGGTCACGGTCCAGAAGGATTCGTTGATGC CGATTGGGCGGACGATGTCGAGGACCGAAAGTCCACAACAGGATACGTTT TCAAGCTGAACGGTGCTGCAATAAGTTGGTGCTCTAGGAAGCAACAGTTA GTCACGTGGTCCAGTACAGAGGCGAATTACGTTGCTGCAGGAGAAGCGGG AAAGGAGACCGTATATCTTAGAGATTTACGAGGATCGATAGGTTTCGGAT GCAGGGGAGCACGACATTATTTTAAGACAGGTCAGCGATTAATCTCAGTA AGGGATCTGGCGTACGCTCCAGGGCAAAGTACATGGGAATGCACTGGCAC GGAATTCGAGAGTGGATTCGGGAAGGAATATTGGCGTTGAAATACGTGCA GGCCGGCGATCAACTTGCCAGCATTTTAACGGAAGGACTGAGCAGAGTAA AGTTT
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Coding sequence (CDS) from alignment at H-paniculata_contig27923:278..1782+

>mRNA_H-paniculata_contig27923.7629.1 ID=mRNA_H-paniculata_contig27923.7629.1|Name=mRNA_H-paniculata_contig27923.7629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2148bp|location=Sequence derived from alignment at H-paniculata_contig27923:278..1782+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGATATTACGTACTATTTTTAGCCTGGCCGCCGAACATGATTTCGA
ATTAGAAGGCATGGACGTAGATGTGGCGTATTTGAACGCCCCCGTAGAAG
AAGAGCTGTTTGTGAAGCTAGCCCCCGAGTTTTCCCCTTTCTCCGGAGAC
ATGCCGTTTGTGCGCCGCCTGCGTAAAGCCCGTACGGCCTCAAGCACTCT
TGATGATATTCTTGTTGGGATAGGACTCGACCGTTCCACTACCGACTCAT
ACTTATACTTCTCCCGCGACGATGGGGGAGAAAAAGACCTTCTGGCGGCC
GTCTATATGTCGATATTACGTACTATTTTTAGCCTGGCCGCCGAACATGA
TTTCGAATTAGAAGGCATGGACGTAGATGTGGCGTATTTGAACGCCCCCG
TAGAAGAAGAGCTGTTTGTGAAGCTAGCCCCCGAGTTTTCCCCTTTCTCC
GGAGACATGCCGTTTGTGCGCCGCCTGCGTAAAGCCCGTACGGCCTCAAG
CACTCTTGATGATATTCTTGTTGGGATAGGACTCGACCGTTCCACTACCG
ACTCATACTTATACTTCTCCCGCGACGATGGGGGAGAAAAAGACCTTCTG
GCGGCCGTCTATTCGGGTTTCAGGATGAAAGCCTTGGGCTCTCTCTCGCG
CGTGTTGGGAATAGAAGTACGACGTGACCGCCCCAATGGTGCCATAACCA
TCTCGCAGGGTAGCTACATCCGCGAGGTGCTGAAAAGATACGGTTTTGAC
GAGTGTCGAGGAGTATCCACCCCTGTAGAGGGAAAAGTGAAGATTTCGGC
ACCCGATCGGGTTTCAGGATGAAAGCCTTGGGCTCTCTCTCGCGCGTGTT
GGGAATAGAAGTACGACGTGACCGCCCCAATGGTGCCATAACCATCTCGC
AGGGTAGCTACATCCGCGAGGTGCTGAAAAGATACGGTTTTGACGAGTGT
CGAGGAGTATCCACCCCTGTAGAGGGAAAAGTGAAGATTTCGGCACCCGA
TGGCAATTCAACTGAATACAGAGGCATGGTAGGATCACTCATGTACGTCT
CGACACGAACTAGACCCGATACAGCATTCGCGGTACACCAAGCAGCACGT
CGTATGGAGGACCCATGTGGGGAAGATTTCAGTACATACAAGTGCATTTG
TCGTTATCTCAGTGCTGTGCCTGGCCTCGGCATTACGTTCGGCGGTAAGA
GTAATGGTCACGGTCCAGAAGGATTCGTTGATGCCGATTGGGCGGACGAT
GTCGAGGACCGAAAGTCCACAACAGGATACGTTTTCAAGCTGAACGGTGC
TGCAATAAGTTGGTGCTCTAGGAAGCAACAGTTAGTCACGTGGTCCAGTA
CAGAGGCGAATTACGTTGCTGCAGGAGAAGCGGGAAAGGAGACCGTATAT
CTTAGAGATTTACGAGGATCGATAGGTTTCGGATGCAGGGGAGCACGACA
TTATTTTAAGACAGGTCAGCGATTAATCTCAGTAAGGGATCTGGCGTACG
CTCCAGGGCAAAGTACATGGGAATGCACTGGCACGGAATTCGAGAGTGGA
TTCGGGAAGGAATATTGGCGTTGATGGCAATTCAACTGAATACAGAGGCA
TGGTAGGATCACTCATGTACGTCTCGACACGAACTAGACCCGATACAGCA
TTCGCGGTACACCAAGCAGCACGTCGTATGGAGGACCCATGTGGGGAAGA
TTTCAGTACATACAAGTGCATTTGTCGTTATCTCAGTGCTGTGCCTGGCC
TCGGCATTACGTTCGGCGGTAAGAGTAATGGTCACGGTCCAGAAGGATTC
GTTGATGCCGATTGGGCGGACGATGTCGAGGACCGAAAGTCCACAACAGG
ATACGTTTTCAAGCTGAACGGTGCTGCAATAAGTTGGTGCTCTAGGAAGC
AACAGTTAGTCACGTGGTCCAGTACAGAGGCGAATTACGTTGCTGCAGGA
GAAGCGGGAAAGGAGACCGTATATCTTAGAGATTTACGAGGATCGATAGG
TTTCGGATGCAGGGGAGCACGACATTATTTTAAGACAGGTCAGCGATTAA
TCTCAGTAAGGGATCTGGCGTACGCTCCAGGGCAAAGTACATGGGAATGC
ACTGGCACGGAATTCGAGAGTGGATTCGGGAAGGAATATTGGCGTTGA
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