mRNA_H-paniculata_contig27923.7629.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 193 bits (490), Expect = 5.690e-53 Identity = 126/352 (35.80%), Postives = 183/352 (51.99%), Query Frame = 2
Query: 224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMP-FVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGG----------------EKDLLAAVYSG----FRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAP--DGN--------STEYRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIG 1162
PVA+ + +R I S+AA++ L MDV A+LN +EEE+++K F P V +L++A R + T+D+ + IG + TD +Y RDD + DLLAA F M LG L LG+EV RD +G +++ Q ++ VL ++G +C+ V TP + +K++ +G YR VG++MY+ TRPD A AV ++ DPC + K + RYL A P GI F G +G G+ DADWA D+E R+ST+GYVF LNG I+W S+KQ+ V SSTEA Y+A EA +E V+L+ +G
Sbjct: 80 PVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGF--VDAKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDKAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTEAEYMALSEATQEAVWLKAFMRELG 428
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA) HSP 1 Score: 202 bits (513), Expect = 6.360e-53 Identity = 129/348 (37.07%), Postives = 188/348 (54.02%), Query Frame = 2
Query: 224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPF-VRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGG-----------------EKDLLAA---VYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDG-----NSTEYRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIGF 1165
PV R +R +F++AAE + +D+ AYLN+ ++EE++++ F S + P V +L+KA R ++TLD++L +G RS ++ LY + G E ++ A + S F M GSLS LG+E++RD G +++ Q +YIR +LK YG CR V+TP++ + D N T+Y+ ++GSLMY++ +RPD AV + ++R +P E + K I RYLS L I + + G GF DADWA+D DRKS +GY F L G+A SW S KQ +V SSTEA YVA A KE VYLR L IG+
Sbjct: 904 PVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNF--ISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSSYIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY--RKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIVALSSTEAEYVALTAAAKEAVYLRRLLAEIGW 1247
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 193 bits (491), Expect = 4.170e-51 Identity = 125/342 (36.55%), Postives = 186/342 (54.39%), Query Frame = 2
Query: 224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGGEKDLLA---------------------AVYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEG--KVKISAPDGNSTE---YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDL 1147
PVAR +RT+ +LAA+H +L MDV A+LN ++EE+++K F G V RLR++ R +S LD L +G ++T D +Y +++GGE ++A A+ F+MK +G L LG++V + I I Q +Y + VL+R+G + + STPV K+K +A D + Y+ VG L+Y+ST+TRPD A+AV AR DP E + K I RYL+ +G+ + G G+ DADWA D++DRKST+GYVF+++ AAISW S+KQ V S+ EA Y+A A +E V+L+ L
Sbjct: 68 PVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIE-KGKEHLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEIFIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQL 407
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A438FG00_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=12 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FG00_VITVI) HSP 1 Score: 186 bits (471), Expect = 1.640e-50 Identity = 118/327 (36.09%), Postives = 169/327 (51.68%), Query Frame = 2
Query: 236 MSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGGEKDLLAAVYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDGNSTE----------YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIG 1162
MS +R + + A + LE +DV A+L+ +EE+L++ + PE G V +LRK+ R D+ + IG R D D +L + F MK LG+ ++LG+ + RD+ NG + +SQ Y+++VL R+ +E + VSTP+ K+S TE Y +GSLMY TRPD A AV +R M P + + K I RYL + F G S +G+VDAD+A D++ RKSTTG+VF L G AISW S Q++VT S+TEA YVAA EAGKE ++L +G
Sbjct: 1 MSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYM-IQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADLVAMLRSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKL--QGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELG 324
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME) HSP 1 Score: 192 bits (488), Expect = 1.910e-50 Identity = 124/375 (33.07%), Postives = 192/375 (51.20%), Query Frame = 2
Query: 224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDM-PFVRRLRKARTASST----LDDILVGIGLDRSTTDSYLYF--------------------SRDDGGEKDLLAAVYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDGNSTE----------YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIGFG-CRGARHYFKTGQRLISVRDLAYAP 1240
PV R + LR +F++AA+HD + +D A+LN ++EE+F+K +S SG + ++ L + AS L+++L+ +GL RS D +YF S D + + + S +MK +GS S VLG+ V+RD I + Q YI VLKR+G D+C V+TP++ K++ +E Y VGSL+Y + TRPD +FAV+ +R ++P + K + RYL GI F + + G+ DADWA D++ R+ST+GYVF + GAAISW S +Q+ V SSTEA +A A +E ++L L + G G + Y + VR+ ++P
Sbjct: 319 PVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEYSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVF--RKSAQSLTGYCDADWAGDLDQRRSTSGYVFIMQGAAISWSSHRQRTVALSSTEAELTSAVSAMQEAIWLHRLESELVHGGTEGIKMYCDNKSAIHIVRNNNFSP 691
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A5CAL2_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5CAL2_VITVI) HSP 1 Score: 189 bits (480), Expect = 2.530e-50 Identity = 120/331 (36.25%), Postives = 173/331 (52.27%), Query Frame = 2
Query: 224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGGEKDLLAAVYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDGNSTE----------YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIG 1162
PV +MS +R + + A + LE +DV A+L+ +EE+L++ + PE G V +LRK+ R D+ + IG R D YF D ++ +Y F MK LG+ ++LG+ + RD+ NG + +SQ Y ++VL R+ +E + +STP+ K+S TE Y +GSLMY TRPD A AV ++ M P + + K I RYL + F G S +G+VDAD A D++ RKSTTG+VF L G AISW S Q++VT S+TEA YVAA EAGKE ++L +G
Sbjct: 170 PVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYM-IQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYFKSFD--NSYIILLLY--FAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYAKKVLNRFNMNEAKPISTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSKFMSRPVKQHWEAVKWILRYLKGSLDTYLCFTGASLKL--QGYVDADXAGDIDSRKSTTGFVFTLCGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELG 493
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 194 bits (493), Expect = 2.770e-50 Identity = 128/351 (36.47%), Postives = 188/351 (53.56%), Query Frame = 2
Query: 224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRK--------ARTASSTLDDILVGIGLDRSTTDSYLY-------------------------FSRDDGGEKDLLAAVYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVE-GKVKISAPD----GNSTEYRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIG 1162
PV R + +R++ +LA D+E+ MDV A+L + +E+++K PE + V +L+K AR +STLD L G + DS LY FS D ++ A+ + F+++ LG +S +LG+ ++RDR + +TISQ Y+ VLKR+ +EC+ VSTP+E GK D N EY+ ++G L YV+T TRPD A AV ++ M P E + K I RY+ GITF K G+ DADWA+D E R+ST+GY+F+++G ISWCS+KQ V+ SSTEA Y+A A +E ++LR L +IG
Sbjct: 919 PVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMK-QPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIG 1268
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 194 bits (493), Expect = 2.900e-50 Identity = 129/343 (37.61%), Postives = 174/343 (50.73%), Query Frame = 2
Query: 224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDG---------------GEKDLLAA----VYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDGNSTE----------YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLR 1141
PV+R+ +RTI SLAA HD+EL MDV AYLN +EE ++++L P F+P V RL+K R TL + +G R D +++ R+ G DL+ A + F M LG L +LGIEVRRDR I ISQ SYI ++ R+ DE +S P++ + ST YR VGSLMY + TRPD FAV ++ M++P + K + RYL L + +G +N G G+ DADW E R S +GYVF L+G AISW S+KQ +V SSTEA Y+A A KE ++LR
Sbjct: 1116 PVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAP-PEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKREGESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLR 1455
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A2N9HGZ8_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HGZ8_FAGSY) HSP 1 Score: 186 bits (471), Expect = 3.210e-50 Identity = 122/351 (34.76%), Postives = 181/351 (51.57%), Query Frame = 2
Query: 212 KSVPPVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDMPFVRRLRKA--------RTASSTLDDILVGIGLDRSTTDSYLYFSRDDGGE--------KDLLAA-------------VYSGFRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKISAPDGNSTE----------YRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDL 1147
K P+ R + +R + +L A+ D ELE +DV A+L+ +EEE+F++ PE G V RL+K+ R D ++ IG R D +Y + G D+L A ++ F MK LG+ ++LG+E+RRDR + +SQ +YIR+VL+++ + + VSTP+ ++S+ + E Y VG LMY TRPD A AV +R M +P E ++ K I RYL GI F + + G+VDAD+A +V+DR+STTGYVF L+G I W S Q +VT S+TEA Y+AA E KE ++L+ L
Sbjct: 24 KGKKPIVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFME-QPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRFDSYMIPIGYTRCEYDCCVYVRILEDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGATKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPNNEEEIENMSKVPYASAVGCLMYEMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVTMSTTEAEYMAAAETAKEALWLKGL 373
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL) HSP 1 Score: 193 bits (490), Expect = 6.980e-50 Identity = 130/372 (34.95%), Postives = 193/372 (51.88%), Query Frame = 2
Query: 224 PVARMSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVK-----LAPEFSPFSGDMPFVRRL----RKARTASSTLDDILVGIGLDRSTTDSYLYFSRDDGG----------------EKDLLAAVYSG----FRMKALGSLSRVLGIEVRRDRPNGAITISQGSYIREVLKRYGFDECRGVSTPVEGKVKI--SAPDGN--------STEYRGMVGSLMYVSTRTRPDTAFAVHQAARRMEDPCGEDFSTYKCICRYLSAVPGLGITFGGKSNGHGPEGFVDADWADDVEDRKSTTGYVFKLNGAAISWCSRKQQLVTWSSTEANYVAAGEAGKETVYLRDLRGSIGFGC-RGARHYFKTGQRLISV 1219
PVA+ + +R I SLAA++ L MDV A+LN ++EE+++K + P++ + + R L + R + T+D+ + IG + D +Y R+D KDLLAA F M LG L LG+EV+RD +G +++ Q +++ VL ++G +C+ V TP + +K+ S +G YR VG+LMY+ TRPD A +V ++ DPC + K + RYL A P GI F G S+G G+ DADWA D+E R+ST+GYV LNG ISW S+KQ+ V SSTEA Y+A EA +E V+L+ +G GA F+ Q I++
Sbjct: 950 PVAKFTSIRIILSLAAQYKLVLHQMDVKTAFLNGLLDEEIYMKQPDGYIDPKYPNHACKLK--RALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDSATMFVVIYVDDLILACNNKDLLAATKRALSERFEMSDLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLTKSMCEGGCKHDETMKDVPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSGSSDGE-LIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKSFMCELGEDSGNGALTVFEDNQGAIAL 1318 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27923.7629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27923.7629.1 >prot_H-paniculata_contig27923.7629.1 ID=prot_H-paniculata_contig27923.7629.1|Name=mRNA_H-paniculata_contig27923.7629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=358bp MSILRTIFSLAAEHDFELEGMDVDVAYLNAPVEEELFVKLAPEFSPFSGDback to top mRNA from alignment at H-paniculata_contig27923:278..1782+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27923.7629.1 ID=mRNA_H-paniculata_contig27923.7629.1|Name=mRNA_H-paniculata_contig27923.7629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1505bp|location=Sequence derived from alignment at H-paniculata_contig27923:278..1782+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27923:278..1782+ >mRNA_H-paniculata_contig27923.7629.1 ID=mRNA_H-paniculata_contig27923.7629.1|Name=mRNA_H-paniculata_contig27923.7629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2148bp|location=Sequence derived from alignment at H-paniculata_contig27923:278..1782+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |