mRNA_H-paniculata_contig279.7623.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Match: D8LI88_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI88_ECTSI) HSP 1 Score: 396 bits (1017), Expect = 3.430e-125 Identity = 205/290 (70.69%), Postives = 243/290 (83.79%), Query Frame = 2
Query: 2267 PQGLAVVPPSLLAAIVAVASDVDGTLTRNDSTVSQRTKDAIKGVMDSGLLFFPATGKTRAGMYKVLGEEIGSELKARNTPGVFIQGLVVYSGAGDEVLFERLLSEDVIAQVEAFCEDQGVSLIAYSGDLIVCSKKDAQTDRIHEYLEPMPEAVGCLTDAVAAGLRVHKLILMDTTVAIDRVRPMVEKLVGEEATLTQAFPDMLEVLPPGASKGNGVEILLKHLGVDTAGLMALGDAENDVDMLRNAAFSVCMGNASPPAKSAAKFVAPTNAEDGAAVAMEVLLGNRRKSP 3136
P+ LA P SLLA + AVASDVDGTLT + TV+ RTKDAIK V++S L FFPATGKTR GMYK+LGE+I + LK ++TPGVFIQGLVVYSGAGDEVL+ERLL ++++QV +FCE++GVSLIAYSGD IVCS KDA+TD+I Y EPMP AVG LTDA+AAGLRVHKLILMD+ AIDRVRP +E+L+G+ AT TQA PDMLEVLP GASKG+GV++LLKHLG+D LMALGDAENDV+MLR A VC+GNASPPA++AA+F+APTNA DG+AVAME LL R K P
Sbjct: 82 PRQLADAPASLLATVEAVASDVDGTLTTPEVTVTPRTKDAIKAVLNSELAFFPATGKTRTGMYKILGEDIAAHLKTKDTPGVFIQGLVVYSGAGDEVLYERLLDVEIVSQVASFCEERGVSLIAYSGDEIVCSVKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILMDSKEAIDRVRPDIERLIGDRATFTQALPDMLEVLPAGASKGHGVDVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAMEQLL--RSKEP 369
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Match: A0A6H5KW38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW38_9PHAE) HSP 1 Score: 335 bits (858), Expect = 1.040e-103 Identity = 169/238 (71.01%), Postives = 202/238 (84.87%), Query Frame = 2
Query: 2423 PATGKTRAGMYKVLGEEIGSELKARNTPGVFIQGLVVYSGAGDEVLFERLLSEDVIAQVEAFCEDQGVSLIAYSGDLIVCSKKDAQTDRIHEYLEPMPEAVGCLTDAVAAGLRVHKLILMDTTVAIDRVRPMVEKLVGEEATLTQAFPDMLEVLPPGASKGNGVEILLKHLGVDTAGLMALGDAENDVDMLRNAAFSVCMGNASPPAKSAAKFVAPTNAEDGAAVAMEVLLGNRRKSP 3136
P +TR GMYK+LGE+I + LKA++TPGVFIQGLVVYSGAGDEVL+ERLL ++++QV +FCE++GVSLIAYSGD IVCS+KDA+TD+I Y EPMP AVG LTDA+AAGLRVHKLILMD+ AIDRVRP +E+L+G+ AT TQA PDMLEVLP GASKG+GV +LLKHLG+D LMALGDAENDV+MLR A VC+GNASPPA++AA+F+APTNA DG+AVAME LL R K P
Sbjct: 16 PRARQTRTGMYKILGEDIAAHLKAKDTPGVFIQGLVVYSGAGDEVLYERLLDIEIVSQVASFCEERGVSLIAYSGDEIVCSEKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILMDSKEAIDRVRPDIERLIGDRATFTQALPDMLEVLPAGASKGHGVNVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAMEQLL--RSKEP 251
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Match: A0A836C834_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C834_9STRA) HSP 1 Score: 280 bits (717), Expect = 3.280e-82 Identity = 154/271 (56.83%), Postives = 191/271 (70.48%), Query Frame = 2
Query: 2309 IVAVASDVDGTLTRNDSTVSQRTKDAIKGVMDSGLLFFPATGKTRAGMYKVLGEEIGSELKARNTPGVFIQGLVVYS-GAGDEVLFERLLSEDVIAQVEAFCEDQGVSLIAYSGDLIVCSK-KDAQTDRIHEYLEPMPEAVGCLTDAVAAGLRVHKLILMDTTVAIDRVRPMVEKLVGEEATLTQAFPDMLEVLPPGASKGNGVEILLKHLGVDTAGLMALGDAENDVDMLRNAAFSVCMGNASPPAKSAAKFVAPTNAEDGAAVAMEVLL 3115
I AVASD+DGT T D V QR DAI +DSG++FFPATGK+RAGM LG G LKAR PGV+IQGLVVY G +V++ERLL D+ +V FC D+ +SLIAYSGD IVC++ +D I +Y EP PEAVG + +A+AAGL VHKLI+M + + RP + +L+G+ A+L QA P MLEVLP GASKG GV LL H+G LMA+GDAEND++ML+ AA SV MGNA P K A+FVAPTNA++GAAVA+E LL
Sbjct: 67 IKAVASDIDGTCTAPDLQVPQRVMDAIVATLDSGIVFFPATGKSRAGMMNTLGPA-GDILKARGAPGVYIQGLVVYGPGPDSKVIYERLLGADIGREVAQFCRDRNMSLIAYSGDRIVCTRLEDKYVTTIADYHEPFPEAVGEIDEAMAAGLPVHKLIIMAPAEEVVQQRPALAQLLGQRASLVQAMPHMLEVLPLGASKGIGVAKLLAHMGFKVENLMAMGDAENDIEMLKMAAVSVAMGNADPEVKKVARFVAPTNAQEGAAVALETLL 336
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Match: A0A7S3XQN8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQN8_HETAK) HSP 1 Score: 235 bits (600), Expect = 4.940e-66 Identity = 129/245 (52.65%), Postives = 168/245 (68.57%), Query Frame = 2
Query: 2309 IVAVASDVDGTLTRNDSTVSQRTKDAIKGVMDSGLLFFPATGKTRAGMYKVLGEEIGSELKARNTPGVFIQGLVVYSGAGDEVLFERLLSEDVIAQVEAFCEDQGVSLIAYSGDLIVCSKKDAQTDRIHEYLEPMPEAVGCLTDAVAAGLRVH-KLILMDTTV-AIDRVRPMVEKLVGEEATLTQAFPDMLEVLPPGASKGNGVEILLKHLGVDTAGLMALGDAENDVDMLRNAAFSVCMGNASP 3037
I A+ASD+DGTL + VSQR + I+ G+LFFPATGK+R G+Y LGE G ELK N PGVF+QGL+VY G+ V+ E LL + + +V FC +G+SL+AY D I+CS++DA TD++ Y EP PEA+G L +A+ A +V+ KLI+M I ++RP +E L+GE+A +TQA MLE+LP G SKG+GV LL LGVD AGL+ALGDAENDV+MLR A V MGNA P
Sbjct: 37 ITAIASDIDGTLLNSKQQVSQRNVETIQRARKKGILFFPATGKSRQGVYNALGE-FGQELKKENCPGVFLQGLIVYDQNGN-VIHEMLLPLEPVKKVVQFCTREGISLVAYHRDRILCSQRDANTDKLINYCEPTPEAIGPLDEAMVANGQVYNKLIIMGNDEDQITKIRPAMEALIGEDAEITQAIGYMLEILPKGGSKGDGVRRLLGALGVDPAGLLALGDAENDVEMLRLAGTGVAMGNARP 279
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Match: A0A0U9HKK9_KLENI (Haloacid dehalogenase-like hydrolase (HAD) family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HKK9_KLENI) HSP 1 Score: 199 bits (507), Expect = 1.620e-53 Identity = 112/269 (41.64%), Postives = 165/269 (61.34%), Query Frame = 2
Query: 2309 IVAVASDVDGTLTRNDSTVSQRTKDAIKGVMDSGLLFFPATGKTRAGMYKVLGEEIGSELKARNTPGVFIQGLVVYSGAGDEVLFERLLSEDVIAQVEAFCEDQGVSLIAYSGDLIVCSKKDAQTDRIHEYLEPMPEAVGCLTDAVAAGLRVHKLILMDTTVAIDRVRPMVEKLVGEEATLTQAFPDMLEVLPPGASKGNGVEILLKHLGVDTAGLMALGDAENDVDMLRNAAFSVCMGNASPPAKSAAKFVAPTNAEDGAAVAMEVLL 3115
I +A+DVDGTL + + T A+K M G+ ATGK R + ++G TPGV++QGL++Y G G +L+ER + EDV +V ++ V++ AY G+ I+C+++D TDR+ Y EP+PEA+G L D V + ++KL+ M AID +RP V+ +G EATL A MLEVLP GASKG G++++L+ + VD ++A+GD END++MLR SV MGNA K+AA+FV +N E G A+A+E +
Sbjct: 23 ITVIATDVDGTLLDSKQQLRGETVAALKAAMAKGIQVLIATGKARGPWIDTVLPQLGL-----TTPGVYMQGLILYDGDGS-ILYERCMDEDVARKVIRLGVEENVTVTAYCGNRILCAERDKHTDRLIGYGEPVPEAMGSLLDVVGK-IPINKLLYMGEQSAIDAIRPAVQAALGREATLVTALNGMLEVLPRGASKGLGLKMVLERMAVDARHVLAIGDGENDIEMLRTVGTSVAMGNAGAEVKAAAQFVTSSNDESGLALAVESFV 284
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Match: A0A7S2ZAW7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAW7_9RHOD) HSP 1 Score: 194 bits (493), Expect = 2.020e-51 Identity = 105/266 (39.47%), Postives = 160/266 (60.15%), Query Frame = 2
Query: 2318 VASDVDGTLTRNDSTVSQRTKDAIKGVMDSGLLFFPATGKTRAGMYKVLGEEIGSELKAR---NTPGVFIQGLVVYSGAGDEVLFERLLSEDVIAQVEAFCEDQGVSLIAYSGDLIVCSKKDAQTDRIHEYLEPMPEAVGCLTDAVAAGLRVHKLILMDTTVAIDRVRPMVEKLVGEEATLTQAFPDMLEVLPPGASKGNGVEILLKHLGVDTAGLMALGDAENDVDMLRNAAFSVCMGNASPPAKSAAKFVAPTNAEDGAAVAME 3106
V DVDGTL + V +A+ +++G+ F ATGK+R G +G ++ +++ PGVF+QGL+VY G +++ ERLLS D+ ++ + GV+++AYS D I+C ++D +T ++ Y EP PE +G D + L +HK++ + +R RP++EK+VG+EA +TQA DM+EVLPP ASKG GVE L+ D A L+A+GDAEND++ML+ A + + MGN K A + N G AVA+E
Sbjct: 34 VTCDVDGTLLNSKHNVDGAVANAVGRTLENGVKFVCATGKSRQGSLNSIGPDLEKKIREAYGGEVPGVFLQGLIVY-GLDGKIVHERLLSSDMAQKLADASREHGVTVVAYSADRILCEEEDDETRKLKPYKEPTPEPIGRWEDVIGK-LPIHKMMYLAPVADCERFRPVLEKIVGDEAKITQAMRDMIEVLPPNASKGYGVERFLESFNADPAKLLAIGDAENDLEMLKLAKYGIAMGNGFDSVKEVADDIVLDNDNAGVAVALE 297
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Match: A0A7S0S5C6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S5C6_9CHLO) HSP 1 Score: 194 bits (492), Expect = 3.250e-51 Identity = 115/266 (43.23%), Postives = 158/266 (59.40%), Query Frame = 2
Query: 2318 VASDVDGTLTRNDSTVSQRTKDAIKGVMDSGLLFFPATGKTRAGMYKVLGEEIGSELKARNTPGVFIQGLVVYSGAGDEVLFERLLSEDVIAQVEAFCEDQGVSLIAYSGDLIVCSKKDAQTDRIHEYLEPMPEAVGCLTDAVAAGLRVHKLILMDTTVAIDRVRPMVEKLVGEEATLTQAFPDMLEVLPPGASKGNGVEILLKHLGVDTAGLMALGDAENDVDMLRNAAFSVCMGNASPPAKSAAKFVAPTNAEDGAAVAMEVLL 3115
+ +DVDGTL + ++ R + A+K +G+ ATGK R + + I ++ PGVF+QGL+V G G L++R + + V+AQ + GV+L AY GD I+ + D T+R+ Y EP EAVG L+ + + VHKLI M ID +RP VE + A+LT A MLEVLP GASKG+GV LL HL D + +MALGD ENDV+ML+ + +V MGNA P AK+AA +VAP N EDG A A+E +
Sbjct: 48 IVTDVDGTLLNSKQELTPRVEAAVKAAAAAGVPLVVATGKARGPWVREVFPRIDMDM-----PGVFLQGLLVCDGQGG-TLWQRPMEDAVVAQCLQLADSYGVTLTAYCGDRILAASLDEHTERLKFYKEPTVEAVGHLS-GILGQVPVHKLIFMAPQTKIDEMRPAVEAALAGSASLTTALTGMLEVLPLGASKGSGVAWLLSHLDADASHIMALGDGENDVEMLQLSGLAVAMGNAGPVAKAAAHWVAPRNDEDGVAAAIEKFV 306
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Match: A0A8J4BBV4_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BBV4_9CHLO) HSP 1 Score: 193 bits (491), Expect = 4.550e-51 Identity = 121/268 (45.15%), Postives = 159/268 (59.33%), Query Frame = 2
Query: 2303 AAIVAVASDVDGTLTRNDSTVSQRTKDAIKGVMDSGLLFFPATGKTRAGMYKVLGEEIGSELKARNTPGVFIQGLVVYSGAGDEVLFERLLSEDVIAQVEAFCEDQGVSLIAYSGDLIVCSKKDAQTDRIHEYLEPMPEAVGCLTDAVAAGLRVHKLILMDTTVAIDRVRPMVEKLVGEEATLTQAFPDMLEVLPPGASKGNGVEILLKHLGVDTAGLMALGDAENDVDMLRNAAFSVCMGNASPPAKSAAKFVAP-TNAEDGAAVAM 3103
A I +ASDVDGTL + ++ + A+K G+ ATGK R + +G TPGVF+QGL+VY G L+E+ L DV + + +G++L AY G+ I+C+ D+ TDR++ Y EP PEAVG L + +++ KLI M ID +RP VE+L+ A+LT A MLEVLP GASKG G+ LL+HLGVD A +MALGD ENDV+ML+ A V MGNA P AKSAA V TN EDG A A+
Sbjct: 59 AEIKLIASDVDGTLLNHQQQLTPAVEAAVKQASALGVPLVVATGKARGPWAHEVLPRLGL-----TTPGVFLQGLLVYDADGSR-LYEQQLPADVAQDCISLAKARGITLTAYCGERILCAATDSHTDRLNFYKEPPPEAVGDLA-RIVGEIQIQKLIFMADQFVIDSLRPEVEQLLTGRASLTTALSGMLEVLPLGASKGAGLSWLLEHLGVDPAHVMALGDGENDVEMLQMAGLGVAMGNAGPKAKSAADVVLEETNDEDGVAKAI 319
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Match: A0A836C2C3_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C2C3_9CHLO) HSP 1 Score: 192 bits (487), Expect = 8.500e-51 Identity = 116/267 (43.45%), Postives = 157/267 (58.80%), Query Frame = 2
Query: 2318 VASDVDGTLTRNDSTVSQRTKDAIKGVMDSGLLFFPATGKTRAGMYKVLGEEIGSELKARNTPGVFIQGLVVYSGAGDEVLFERLLSEDVIAQVEAFCEDQGVSLIAYSGDLIVCSKKDAQTDRIHEYLEPMPEAVGCLTDAVAAGLRVHKLILMDTTVAIDRVRPMVEKLVGEEATLTQAFPDMLEVLPPGASKGNGVEILLKHLGVDTAGLMALGDAENDVDMLRNAAFSVCMGNASPPAKSAAKFVAP-TNAEDGAAVAMEVLL 3115
+A+DVDGTL + ++ ++A+K + G+ ATGK R + +G + TPGVF+QGL+VY G L+++ L +DV E +GV+L AY G+ I+C+ DA TDR++ Y EP PEAVG + V +HK+I M ID +RP E L+G A+LT A MLEVLP GASKG G+ LL HLGV+ +MALGD ENDV+ML+ A V MGNA P AK+AA V TN +DG A A+ +
Sbjct: 42 IATDVDGTLLNHRQELTAGVEEAVKAARELGVPLVVATGKARGPWVADVLPRLGLD-----TPGVFLQGLLVYDAEGRR-LYDQRLPDDVARDCIELAEREGVTLTAYCGERILCAATDAHTDRLNFYKEPPPEAVGDMRRQVGVT-EMHKMIFMADQSKIDALRPHAEALLGGRASLTTALTGMLEVLPLGASKGEGLRWLLAHLGVEPQHVMALGDGENDVEMLQLAGLGVAMGNAGPKAKAAADVVLDETNDQDGVAAAIRAYV 301
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Match: A0A7S0RP72_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RP72_9CHLO) HSP 1 Score: 191 bits (485), Expect = 1.670e-50 Identity = 111/266 (41.73%), Postives = 157/266 (59.02%), Query Frame = 2
Query: 2318 VASDVDGTLTRNDSTVSQRTKDAIKGVMDSGLLFFPATGKTRAGMYKVLGEEIGSELKARNTPGVFIQGLVVYSGAGDEVLFERLLSEDVIAQVEAFCEDQGVSLIAYSGDLIVCSKKDAQTDRIHEYLEPMPEAVGCLTDAVAAGLRVHKLILMDTTVAIDRVRPMVEKLVGEEATLTQAFPDMLEVLPPGASKGNGVEILLKHLGVDTAGLMALGDAENDVDMLRNAAFSVCMGNASPPAKSAAKFVAPTNAEDGAAVAMEVLL 3115
+ +DVDGTL + ++ RT+ A+K D+G+ ATGKTR K + +G + PG+F+QGL++Y AG E+++ L + + + F + GVSLIA+ D I+C +D TDR ++ EP EA+G L D V + +HKLILM ++R+RP E L A LT A P MLE+LP GASKG VE LL H+ +D + +MA GD ENDV+MLR SV + NA A+SA+ V +N EDG A A+E +
Sbjct: 49 IVTDVDGTLLNSSQQLTLRTEQAVKAAQDAGVPTIVATGKTRGPWSKDVLPRLGPPM-----PGIFVQGLLIYDEAG-EIIYSNPLPDHIALEGIQFAKKHGVSLIAFCQDRILCESEDEHTDRTLDFGEPRAEAMGPLED-VLGEVEMHKLILMGEESTLERIRPEAEALFEGRAALTVAVPGMLEILPKGASKGQAVEWLLNHMKIDPSNVMAFGDGENDVEMLRLVGASVSVENAGTHARSASITVTASNDEDGVAQAIEKFV 307 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig279.7623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig279.7623.1 >prot_H-paniculata_contig279.7623.1 ID=prot_H-paniculata_contig279.7623.1|Name=mRNA_H-paniculata_contig279.7623.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=379bp MTRLNMRVCLGLIPVTTAVAAVNAATRRGFIRTVHSPNSNGSFNRYRSRPback to top mRNA from alignment at H-paniculata_contig279:20131..31998- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig279.7623.1 ID=mRNA_H-paniculata_contig279.7623.1|Name=mRNA_H-paniculata_contig279.7623.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11868bp|location=Sequence derived from alignment at H-paniculata_contig279:20131..31998- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig279:20131..31998- >mRNA_H-paniculata_contig279.7623.1 ID=mRNA_H-paniculata_contig279.7623.1|Name=mRNA_H-paniculata_contig279.7623.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2274bp|location=Sequence derived from alignment at H-paniculata_contig279:20131..31998- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |