prot_H-paniculata_contig279.7622.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig279.7622.1
Unique Nameprot_H-paniculata_contig279.7622.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length2219
Homology
BLAST of mRNA_H-paniculata_contig279.7622.1 vs. uniprot
Match: A0A6H5KL02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL02_9PHAE)

HSP 1 Score: 1088 bits (2813), Expect = 0.000e+0
Identity = 883/2266 (38.97%), Postives = 1141/2266 (50.35%), Query Frame = 0
Query:   32 IVRLLSFLASSLEEVTSTEACDIAAATLTVQGTHYVTDRR-TQRAVGARSSRIHRLRRAYNIILFGSASHEEAIEQAEAEDISEMVNAEILADNNAKLFMTASAPRGSTQVLSSGSGADDLSSALSSLSTASLQLRKARRYDPANALDGLVDGLLA------RRRQDT----SKIACVLRLLVALQNIPEGGGEHANGEVVGVQGRRVLQRLYSNQLGQLPVQSKTVETEFPXXXXXXXXXHIAVGGQQINPGLPDDMFLRHGQHRPPTTRDGPLSKANDESLDSVGNLLVMKAISRNRYLLPNDCVLHGDSIAADPAAGGRGSIAGFG----------IERMPWFTDAEFSSERGIPNISQGSSLSRCIAAVIHAPLSPTAWTRLKQPEAASGKVVPSFKTGVTGGAPAVPITSTSNRYERVGI----------GADTSASGRVKFRGHDDLCGAVHHRSSMDPRSPATKELRIMLSFPDLDNA-PRDLLKAVQLQQSVA-PTKPAIGSGEGNNGGSAAARNYRQLVRQRRLQAETFLSECGSCPGQHEPQHMLYSRTQQQSSFGKKGGM----------ASLRDDGICGVGYTADRAQGAVTLRLHPIGWQRAEARLNDSIMTEWALAPAPLLTGEGGAGS--EAFEVCYREHF--AGVGG---EIRSPAFIEPEMMRRALTVLQGVPSDIFWYDHKEVRMHVAGCRRKGAKSEGEGKADVQAASPVWREFERPPPRLAGSSPGSLMSFLEEFALAGTWYRRVEEFAGCLIDGSAAAGQVAQAFGAELRRQLTRLQAVILVVTTDVVASGRTSWLVDRTRRGSHVAMPGGVGVVDTYNSAPSVRSCSLAGILHRTVEIRRAAAALAEICGLTADDLGAYGGVKAAAAEFPRGASLLTHLYKITEARAASEPAECEHASDDCVPGKTDSAMSLLGSAAAPYLNMLGRWLWSGEMWKEDDPCEEFPLRCRSSPRVAGTNGTGGQSWAVKEPWMRDGGGGFMTEAFRENTAAGVPCFLDGGVLAAAARAGKVLRMLKLSSPEFFASCAASPPPPLYLVFDSYDLQSRESMFSRLSFLQMTSARSAARALRVRAAEDELRKVAERVSVAGGLVEAEKAALRMLESQREKDRASVEQARVIWVQGLNADRAAAXXXXXXX---------TAQAFSPPSGKQGRSMLSFLEPPTSTAEAQAAATLRERYRLLGEEADARAARARWKRRRSERVRSARLSLKEVYTAETRLWVAELAATATMAAETLTPIDDLSSEGIYAVAGETEPSAIAALPESDNKMDGLGECRGM--IDRSEHVDVELTAGKCELSLRALPMGTAATMPGTTNHAQLSDVHASD--EDAQASGIATVAVDEEGDPDSARTGELAHDDVGNRYDSFQIKFSHVTITEEPGGKSTGVARALGGSDAAASGAQEVKGDEGKRRSGDEGVCLGDNDRPPALKFSHVTIVEEPGGSSAGVSQALGGAEEVSCSGSGSGELSRERRANASNVSHITTPDLHTGDRDVGTVKASGTEK----------GEKQMDKRQDDDEGAYLGDNGCPPALKFSHVTIVEEPGGSSAGVSQALGGTQEVSHSSGDSGGSSRESQADASHISHTKTPDFHTVSRDMEIGDVSGDGRTTEPERMDDDLIVVGEEFRSPVENDAPTSAGGLGDPSLATVHQEAFTGSQGAVLAQGVASESENLLKRLAPNHTVDESCVEGDEEGLGSRGGQHQGRTARHKQDVIKKIGANDISDAHTSFTDRRRAFLATGVAPSMKVRGTPRVSRTEEMSSSPLPLEAVVRRCVRDPVLAQCRAVDSAALMFLAHGAGAVEHFASLRMFLLGLNSGFLHEFTLRLLEGLYDGGVDWRRPSNLNAAFAASAAAAGLESAPLFDTFQYEVDLTHGGVFGGG---GKLD--SSARRQKIDGDIENVGWRKLEESGEGYGD---ASAHAAESQERYSSTALSYVNPVLAVSWPLGVLLPAGALRSYGSIHRALFRHQIALHRLRRLRLTLRALDVAMTSLKRAVVGSRRRAMDLSGTGGGGVREAGKMTMASWDCGRLHWVHLFRHEMQHMADSLQSFFAEQAEIGWPDLRQSLTSSTSFSDQGLGSISPQIGVPTVGGLAVLASAHSRYIQDMRRNMFLGNDRPGMVARARIEDLYEVVCIVSRVTDDLGRRHDQQQQQTYSPDDSSAPILHPTTGPAVVGAQSLIVSDKAFAELVSARERFDTSRKGLCGALVKIAENGGGAHARPLLAILGYGGY 2216
            + RLLS L +S+EE +  +AC  +      +G +   +   + R   + S RI  LRRAYNI+LFG  SH E + QA  ED +         DN                        D   S  +++S  SL+LR+ARRYDPANAL+GLV+ L+A      R+R+DT    S +  VLRLL+AL+       +  + E++G   RRVL+RLYS+        S                   A  G                       R   L KA++ +L +    L ++   ++RYLLP DCVLHGDS A   A     ++  F           IER+PWFTDAEFSSERGIPN+++G SL   +  +  APLSP  WTRL++  A +G    +     + GAP  P+    +  E +G+           A     G     G  DLCGA+  ++++D RSPA +ELR+ LSFPDLD + P DLL+A +L +    PT   +G G            Y+  + +R       L +         P+ +L      +S  GK G M          AS     + GV + A   + A  L L P+GW+R EA  ND    +WALA APL TGEGG  S  +AFE+CYREHF  AG+GG   E  S A  E E++RRAL  LQGVPS  FWYD    +M V G       + G+  A  +A S         PPR+AG SPG+L S LEEFA+AGTWYRRV+E   CL++ S++ GQV++AFG ELRRQLT +++ +LVVT ++       W            +    G  DT  +    R CSLAGIL  T ++RRA  ALAEICGL+ DDL + GGV+A    FPRGASLLT+LYK  E R AS+P          V  + DSA++LL SAA PYL+MLGRWLWSGEMW EDDPCEEFPLRCR    + G +     S A KEPW  DGGG FM+ AF EN AAGVPCFL GGVL AAARAGK+LRMLKLSSPEF+ +C+ASPPPPL L F S  L SR ++F RL  L+  + +SAAR +R R AE E++    R   +  LV  E++AL  L+ QRE+D ASV++AR IWVQGL  DRAAA XXXXXX          A+  SP     G+ +LSFL+PPTS AEA AAA + ERYR+LGEEADARAARARWKR+RS RV +AR SLK +Y  E  LW                       EG+ A AG          P +++     G   G+  +D +++   ++       ++   P  T  T  G   H     V   +   D+  S +   A +E G     R  E   +    R        S V + + P G+  GVA A+G      S   + +G                      +KFSHVTIV+EPGG S GVS    GA   +  G G    +R      S V  I                                 E   ++  D+++G ++           S  T+  E G S+ G S A+G                    ADA                 M +G V GD  +    R     ++           D PT  G   DP+ A    E   G  GA+ A+          K   PN +        D                       K IGA D+       TD                              +PLPLE +VRRCVR+PVLAQC AVDSAAL FL   AG  EH ASLR FLLGL S FLH+FTLRLL+GLYDGGVDWRR SNL+AAFAASA A GL+S PL +TF+YEVD T GG+ G G   G LD   +A    + G   +     +        +   +S+ + + +E YS  ALS+V+PVL V WP+GVLLP G L +YGSIHR+L RHQ+ LHRLRRLRL LR LD  + +     +G        SG      R+ G   + SWD GRLHW+HLFRHEMQHMADSLQ++F EQAE GWP+LR+SL  +                      LA L +AHSRYI  M+R MFLG DR G VAR  I++ Y V+C V RVTD L        + +  P      ++  T   + VG   +++ D+AFAEL + RE+FD +R+GLC AL +I   GGG  ARPLL+++GYGGY
Sbjct:   12 VPRLLSLLVASVEEAS--QACSSS-----WEGEYNPPENTWSARTTCSSSLRIRGLRRAYNILLFGGPSHAEILAQAALEDSNHYC-----CDNF-----------------------DAGPSVAAAVSVVSLELRRARRYDPANALEGLVEDLIASNGCKERQREDTDGCSSAVENVLRLLLALRGEGRRASDVDDWELLGGHSRRVLERLYSSS-------SXXXXXSIGEAVGLDICTSDAAAG----------------------CRAEGLGKADEPALATKAASLGVRQ-QQHRYLLPVDCVLHGDSTATPAATTLSSTVLSFSDTAKHGVVGAIERIPWFTDAEFSSERGIPNMNKGPSLDEGLEFMATAPLSPANWTRLRESSATAGD--DTVVAHGSRGAPVAPVMVVGHG-EGIGVRRSNLSMPAVAASQVNGGASLVHGGLDLCGALS-QANIDARSPAVRELRLALSFPDLDESLPTDLLEAAKLYEPPGRPTDHPVGDG------------YQHGLPERTFGEANVLWQ--------SPRGVL------RSPKGKCGRMLPMDEFAPPWASNNGGHLSGVIHDAANHEVAA-LELEPVGWERTEADWNDPSFPKWALACAPLATGEGGGPSSKKAFELCYREHFGWAGLGGSLGEADSTAKAEVEVVRRALAALQGVPSGYFWYDETRAQMCVCG-------NVGQDGAVEEAPSM--------PPRVAGLSPGALSSLLEEFAMAGTWYRRVQELVRCLVNASSSNGQVSRAFGIELRRQLTEVESALLVVTMELEG---LEW-----NESDSACLH---GTQDTPLNEQ--RFCSLAGILAYTTQLRRAVGALAEICGLSEDDLRSAGGVRAVFNAFPRGASLLTYLYKAAEVRVASKPGGESTCFFGRVMAEGDSALALLSSAATPYLSMLGRWLWSGEMWAEDDPCEEFPLRCREG--LTGND----TSKATKEPWTEDGGGSFMSLAFCENGAAGVPCFLAGGVLHAAARAGKLLRMLKLSSPEFYTACSASPPPPLSLEFGSRALASRVAIFERLRLLRAAAGQSAAREIRARVAEKEMKTGMTRGGGSEQLVAEERSALGKLQLQRERDYASVKEARRIWVQGLEGDRAAAAXXXXXXXXXXXXXXTAAEKPSPAGVYGGQGVLSFLDPPTSEAEAFAAAAITERYRVLGEEADARAARARWKRQRSARVVAARASLKMLYEEEMHLW-----------------------EGMAAGAG----------PGAESHSTTAGHEAGVSDVDNADNTLQDVVDSSSADAVGGGPDSTDGTGGGQMGHVVEQAVAEGELIADSDGSRVEVRAEEEVGTSKRGRDSE-GSEAPDKRPGGDDANISPVGMLDAPSGQLAGVAEAVG------SAGNDAQG----------------------IKFSHVTIVQEPGGKSHGVS----GAFAANIDGGGDDATTRGPLPGRSGVRRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEDSREREHDNNDGEHV-----------SRATV-RESGQSAVGGSLAVG--------------------ADAP----------------MAVGKVGGDTESRSGTRT---ALI-----------DPPTF-GDRTDPNAADSRPETVKG--GAIAAK----PDPEGAKAKRPNDSWSLFLEAPD-----------------------KGIGALDLG------TD----------------------------GDAPLPLEVIVRRCVREPVLAQCSAVDSAALAFLVRDAGVTEHLASLRTFLLGLTSDFLHDFTLRLLDGLYDGGVDWRRSSNLDAAFAASALATGLDSVPLAETFRYEVDPTCGGILGSGPATGSLDLGRTADPSGMTGSAAHSATAAVTTPTTTRAELSLSSSLSVQEEELYSPVALSFVSPVLEVKWPVGVLLPTGVLHTYGSIHRSLIRHQLVLHRLRRLRLVLRELDACLDAASGGGIGGXXXXGRRSGR-----RQRGGARV-SWDRGRLHWLHLFRHEMQHMADSLQTYFVEQAEAGWPNLRRSLAVAGXXXXX-----------XXXXXLAALVAAHSRYITKMQRYMFLGTDRQGAVARGSIQEFYAVICTVGRVTDGL-----LSSKPSRFPPALVEDVIDGTCTGSAVG--EMVLPDEAFAELAAVREKFDAARRGLCAALSEICAAGGGTRARPLLSVIGYGGY 1931          
BLAST of mRNA_H-paniculata_contig279.7622.1 vs. uniprot
Match: D8LI89_ECTSI (Tubulin binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI89_ECTSI)

HSP 1 Score: 681 bits (1757), Expect = 8.650e-210
Identity = 633/1900 (33.32%), Postives = 823/1900 (43.32%), Query Frame = 0
Query:  370 ISQGSSLSRCIAAVIHAPLSPTAWTRLKQPEAASGKVVPSFKTGVTGGAPAVPITSTS----NRYERVGIGADTSASGRVK-----FRGHDDLCGAVHHRSSMDPRSPATKELRIMLSFPDLDNA-PRDLLKAVQLQQSVAPTKPA---IGSGEGNNGGSAAARNYRQLVRQRRLQAETFLSECGSCPGQHEPQHMLYSRTQQQSSFGKKGGMASL--------RDDGICGVGYTADRAQGAVT-LRLHPIGWQRAEARLNDSIMTEWALAPAPLLTGEGGAGSE--AFEVCYREHF--AGVGG---EIRSPAFIEPEMMRRALTVLQGVPSDIFWYDHKEVRMHVAG-CRRKGAKSEGEGKADVQAASPVWREFERPPPRLAGSSPGSLMSFLEEFALAGTWYRRVEEFAGCLIDGSAAAGQVAQAFGAELRRQLTRLQAVILVVTTDVVASGRTSWLVDRTRRGSHVAMPGGVGVVDTYNSAPSVRSCSLAGILHRTVEIRRAAAALAEICGLTADDLGAYGGVKAAAAEFPRGASLLTHLYKITEARAASEPAECEHASDDCVPGKTDSAMSLLGSAAAPYLNMLGRWLWSGEMWKEDDPCEEFPLRCRSSPRVAGTNGTGGQSWAVKEPWMRDGGGGFMTEAFRENTAAGVPCFLDGGVLAAAARAGKVLRMLKLSSPEFFASCAASPPPPLYLVFDSYDLQSRESMFSRLSFLQMTSARSAARALRVRAAEDELRKVAERVSVAGGLVEAEKAALRMLESQREKDRASVEQARVIWVQGLNADRAAAXXXXXXXTAQAFSPPSGKQGRSMLSFLEPPTSTAEAQAAATLRERYRLLGEEADARAARARWKRRRSERVRSARLSLKEVYTAETRLWVAELAATATMAAETLTPIDDLSSEGIYAVAGETEPSAIAALPESDNKMDGLGECRGMIDRSEHVDVELTAGKCELSLRALPMGTAATMPGTTNHAQLSDVHASDEDAQASGIATVAVDEEGDPDSARTGELAHDDVGNRYDSFQIKFSHVTITEEPGGKSTGVARALGGSDAAASGAQEVKGDEGKRRSGDEGVCLGDNDRPPALKFSHVTIVEEPGGSSAGVSQALGGAEEVSCSGSGSGELSRERRANASNVSHITTPDLHTGDRDVGTVKASGTEKGEKQMDKRQDDDEGAYLGDNGCPPALKFSHVTIVEEPGGSSAGVSQALGGTQEVSHSSGDSGGSSRESQADASHISHTKTPDFHTVSRDMEIGDVSGDGRTTEPERMDDDLIVVGEEFRSPVENDAPTSAGGLGDPSLATVHQEAFTGSQGAVLAQGVASESENLLKRLAPNHTVDESCVEGDEEGLGSRGGQHQGRTARHKQDVIKKIGANDISDAHTSFTDRRRAFLATGVAPSMKVRGTPRVSRTEEMSSSPLPLEAVVRRCVRDPVLAQCRAVDSAALMFLAHGAGAVEHFASLRMFLLGLNSGFLHEFTLRLLEGLYDGGVDWRRPSNLNAAFAASAAAAGLESAPLFDTFQYEVDLTHGGVFGGG---GKLDSSARRQK---IDGDIENV-GWRKLEESGEGYGDASAHAAESQERYSSTALSYVNPVLAVSWPLGVLLPAGALRSYGSIHRALFRHQIALHRLRRLRLTLRALDVAMTSLKRAVVGSRRRAMDLSGTGG----------------GGVREAGKMTMASWDCGRLHWVHLFRHEMQHMADSLQSFFAEQAEIGWPDLRQSLTSSTSFSDQGLGSISPQIGVPTVGGLAVLASAHSRYIQDMRRNMFLGNDRPGMVARARIEDLYEVVCIVSRVTDDLGRRHDQQQQQTYSPDDSSAPILHPTTGPAVVGAQSLIVSDKAFAELVSARERFDTSRKGLCGALVKIAENGGGAHARPLLAILGYGGY 2216
            +++G SL   +  +  APLSP  WTRL +  A +G    +     +GGAPA P+ +      N   R+ +     A+ +V        G  DLCGA+  ++++D RSPA +ELR+ LSFPDL+   P DLL+A +L +   P +PA   +G G            Y+  + +R +  E  +           P+ +L      +S  GK G M  +         ++G    G   D A   V  L L P+GW+R EA  ND    +WALA APL+TGEGG  S   AFE+CYREHF  AG+GG   E  + A  E E++RRAL  LQGVPS  FWYD    +M V G   + GA  E          +P+       PPR+AG SPG+L S LEEFA+AGTWYRRV+EF  CL++  ++ GQVA+AFG ELRRQLT +Q+ +L VT ++   G   W  D      H       G  DT  +    R CSLAGIL  T ++RRA  ALAEICGL+ DDL + GGV+A    FPRG+SLLT+LYK  E R AS+P        + V  + DSA++LL SAA PYL+MLGRW+WSGEMW EDDPCEEFPLRCR   R+ G++     S A KEPW  DGGG FM+ AF EN AAGVPCFL GGVL AAAR GK+LRMLK ++                                                                 S  G +  A  ++ R    +R++D          W + +   R           A+   P +   G+ +LSFL+PPTS AEA AAA + ERYR+LG+EADARAARARWKR+RS RV +AR SLK +Y  E   W                       EG+ A AG          P +++     G   G+ D          A   + +L  +   +A  + G  + +          D    G     V++     +   GEL  D  G+R +        V   EE G           G D+  SGA +      KR  GD+               S V I++ P G  AGV++A+                                                G+E  E Q                     +KFSHVTIV+EPGG S GVS A                                              ++ G G                        +DA TS                  G  G                    + + D              G     R  R  +    +   ND +D  T     R  +   G+ P                                                                                R      D  VDWRR SNL+AAFAASA A GL+S PL +TF+YEVD T GG+ G G   G LD   R +      G + +                    + + +E YS  ALS+V+PVL V WP+GVLLP G L +YGSIHR+L RHQ+ALHRLRRLRL LR LD  + +                                    GG R        SWD GRLHW+HLFRHEMQHMADSLQS+FAEQAE  WPDLR+SL  +                      LA L +AHSRYI  M+R MFLG DR G VAR  I + Y V+C V R+TD L        + + SP  S A + + T   + VG   +++ D+AFAEL + RE+FD +R+GLC AL +I   GGG  ARPLL+++GYGGY
Sbjct:    1 MNKGPSLDEGLELMATAPLSPANWTRLCESSATAGD--DTVVAHGSGGAPAAPVMAVEHVEGNGVRRLNLSMPVVAASQVNGGAPLVHGGLDLCGALS-QANIDARSPAVRELRLALSFPDLEEGLPTDLLEAAKLHKP--PRRPADHPVGDG------------YQHGLPERTIGKEANVLW-------QSPRGVL------RSPKGKCGRMLPIDEFAPPWGSENGGHLSGVIHDAANHEVAALELEPVGWERTEADWNDPSFPKWALACAPLVTGEGGGPSSKRAFELCYREHFEWAGLGGSLGEADTTAKAEVEVVRRALAALQGVPSGYFWYDETHAQMRVCGHVGQDGAVEE----------APLM------PPRVAGLSPGALSSLLEEFAMAGTWYRRVQEFVRCLVNTPSSNGQVARAFGIELRRQLTEVQSALLGVTMELEGLG---WN-DSDSACLH-------GTQDTPLNEQ--RCCSLAGILAHTTQLRRAVGALAEICGLSEDDLRSAGGVRAVFNAFPRGSSLLTYLYKAAEVRVASKPGGESTCFFERVMAEGDSALALLSSAATPYLSMLGRWIWSGEMWAEDDPCEEFPLRCRE--RLTGSD----TSKATKEPWTEDGGGSFMSLAFCENGAAGVPCFLAGGVLHAAARTGKLLRMLKAAA-----------------------------------------------------------------SSGGAVSRARDSSTRC--GKRDEDGNDTWG----WERTVTGGR---EVGSREAPAEKRPPAAVYGGQGVLSFLDPPTSEAEAFAAAAITERYRVLGKEADARAARARWKRQRSARVVAARASLKMLYEEEMHRW-----------------------EGMAAGAG----------PGTESHSTTAGHEAGVSD----------ADNADNTLHGVEASSADAVGGGPDSS----------DGTGGGQMGHVVEQ-----AVAEGELNADSDGSRVE--------VRAEEEVG-------TIKRGRDSEGSGAPD------KRPGGDD------------ANISPVGILDAPSGHMAGVAEAV------------------------------------------------GSEGNEAQ--------------------GMKFSHVTIVQEPGGKSHGVSGAF-------------------------------------------AANIDGGG------------------------DDATTSG--------------PLPGRSGVRRIXXXXXXXXXXXXXXXXHDSAD--------------GVDKAPRAGRIAEGEDSRERDNDNNDGETV----RWTWGRMGMLP-------------------------------------------------------------------------------FRWRSSCAD-AVDWRRSSNLDAAFAASALATGLDSVPLAETFRYEVDPTCGGILGSGPATGSLDLGRRAESSGMTGGAVHSATAXXXXXXXXXXXXXXXXLSVQEEELYSPVALSFVSPVLEVKWPVGVLLPTGVLHTYGSIHRSLIRHQLALHRLRRLRLVLRELDACLDAASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGAR-------VSWDRGRLHWLHLFRHEMQHMADSLQSYFAEQAEADWPDLRRSLAVAGXXXXX-----------XXXXXLAALVAAHSRYITKMQRYMFLGTDRQGAVARGSIGEFYAVICTVGRITDGL-----LSSKPSRSPPASVADLSNGTCTGSAVG--EMVLPDEAFAELAAVREKFDAARRGLCAALSEICAAGGGTRARPLLSVIGYGGY 1398          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig279.7622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KL02_9PHAE0.000e+038.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI89_ECTSI8.650e-21033.32Tubulin binding n=1 Tax=Ectocarpus siliculosus Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040457Gamma tubulin complex component, C-terminalPFAMPF04130GCP_C_terminalcoord: 1927..2217
e-value: 3.1E-13
score: 49.9
IPR041470Gamma tubulin complex component protein, N-terminalPFAMPF17681GCP_N_terminalcoord: 661..1027
e-value: 1.5E-14
score: 54.4
IPR042241Gamma-tubulin complex, C-terminal domain superfamilyGENE3D1.20.120.1900coord: 1790..2151
e-value: 4.4E-8
score: 34.6
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 652..2125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig279contigH-paniculata_contig279:10419..19205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig279.7622.1mRNA_H-paniculata_contig279.7622.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig279 10419..19205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig279.7622.1 ID=prot_H-paniculata_contig279.7622.1|Name=mRNA_H-paniculata_contig279.7622.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2219bp
KCRRRGVTERTARALCASVNPMDEHSGARYDIVRLLSFLASSLEEVTSTE
ACDIAAATLTVQGTHYVTDRRTQRAVGARSSRIHRLRRAYNIILFGSASH
EEAIEQAEAEDISEMVNAEILADNNAKLFMTASAPRGSTQVLSSGSGADD
LSSALSSLSTASLQLRKARRYDPANALDGLVDGLLARRRQDTSKIACVLR
LLVALQNIPEGGGEHANGEVVGVQGRRVLQRLYSNQLGQLPVQSKTVETE
FPPPPPTQQQQHIAVGGQQINPGLPDDMFLRHGQHRPPTTRDGPLSKAND
ESLDSVGNLLVMKAISRNRYLLPNDCVLHGDSIAADPAAGGRGSIAGFGI
ERMPWFTDAEFSSERGIPNISQGSSLSRCIAAVIHAPLSPTAWTRLKQPE
AASGKVVPSFKTGVTGGAPAVPITSTSNRYERVGIGADTSASGRVKFRGH
DDLCGAVHHRSSMDPRSPATKELRIMLSFPDLDNAPRDLLKAVQLQQSVA
PTKPAIGSGEGNNGGSAAARNYRQLVRQRRLQAETFLSECGSCPGQHEPQ
HMLYSRTQQQSSFGKKGGMASLRDDGICGVGYTADRAQGAVTLRLHPIGW
QRAEARLNDSIMTEWALAPAPLLTGEGGAGSEAFEVCYREHFAGVGGEIR
SPAFIEPEMMRRALTVLQGVPSDIFWYDHKEVRMHVAGCRRKGAKSEGEG
KADVQAASPVWREFERPPPRLAGSSPGSLMSFLEEFALAGTWYRRVEEFA
GCLIDGSAAAGQVAQAFGAELRRQLTRLQAVILVVTTDVVASGRTSWLVD
RTRRGSHVAMPGGVGVVDTYNSAPSVRSCSLAGILHRTVEIRRAAAALAE
ICGLTADDLGAYGGVKAAAAEFPRGASLLTHLYKITEARAASEPAECEHA
SDDCVPGKTDSAMSLLGSAAAPYLNMLGRWLWSGEMWKEDDPCEEFPLRC
RSSPRVAGTNGTGGQSWAVKEPWMRDGGGGFMTEAFRENTAAGVPCFLDG
GVLAAAARAGKVLRMLKLSSPEFFASCAASPPPPLYLVFDSYDLQSRESM
FSRLSFLQMTSARSAARALRVRAAEDELRKVAERVSVAGGLVEAEKAALR
MLESQREKDRASVEQARVIWVQGLNADRAAAAAAAAASTAQAFSPPSGKQ
GRSMLSFLEPPTSTAEAQAAATLRERYRLLGEEADARAARARWKRRRSER
VRSARLSLKEVYTAETRLWVAELAATATMAAETLTPIDDLSSEGIYAVAG
ETEPSAIAALPESDNKMDGLGECRGMIDRSEHVDVELTAGKCELSLRALP
MGTAATMPGTTNHAQLSDVHASDEDAQASGIATVAVDEEGDPDSARTGEL
AHDDVGNRYDSFQIKFSHVTITEEPGGKSTGVARALGGSDAAASGAQEVK
GDEGKRRSGDEGVCLGDNDRPPALKFSHVTIVEEPGGSSAGVSQALGGAE
EVSCSGSGSGELSRERRANASNVSHITTPDLHTGDRDVGTVKASGTEKGE
KQMDKRQDDDEGAYLGDNGCPPALKFSHVTIVEEPGGSSAGVSQALGGTQ
EVSHSSGDSGGSSRESQADASHISHTKTPDFHTVSRDMEIGDVSGDGRTT
EPERMDDDLIVVGEEFRSPVENDAPTSAGGLGDPSLATVHQEAFTGSQGA
VLAQGVASESENLLKRLAPNHTVDESCVEGDEEGLGSRGGQHQGRTARHK
QDVIKKIGANDISDAHTSFTDRRRAFLATGVAPSMKVRGTPRVSRTEEMS
SSPLPLEAVVRRCVRDPVLAQCRAVDSAALMFLAHGAGAVEHFASLRMFL
LGLNSGFLHEFTLRLLEGLYDGGVDWRRPSNLNAAFAASAAAAGLESAPL
FDTFQYEVDLTHGGVFGGGGKLDSSARRQKIDGDIENVGWRKLEESGEGY
GDASAHAAESQERYSSTALSYVNPVLAVSWPLGVLLPAGALRSYGSIHRA
LFRHQIALHRLRRLRLTLRALDVAMTSLKRAVVGSRRRAMDLSGTGGGGV
REAGKMTMASWDCGRLHWVHLFRHEMQHMADSLQSFFAEQAEIGWPDLRQ
SLTSSTSFSDQGLGSISPQIGVPTVGGLAVLASAHSRYIQDMRRNMFLGN
DRPGMVARARIEDLYEVVCIVSRVTDDLGRRHDQQQQQTYSPDDSSAPIL
HPTTGPAVVGAQSLIVSDKAFAELVSARERFDTSRKGLCGALVKIAENGG
GAHARPLLAILGYGGYWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040457GCP_C
IPR041470GCP_N
IPR042241GCP_C_sf
IPR007259GCP