prot_H-paniculata_contig2789.7618.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2789.7618.1
Unique Nameprot_H-paniculata_contig2789.7618.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length199
Homology
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Match: A0A2N9HLT2_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HLT2_FAGSY)

HSP 1 Score: 110 bits (274), Expect = 2.010e-24
Identity = 63/194 (32.47%), Postives = 107/194 (55.15%), Query Frame = 0
Query:    8 EPKNHWEAQTSPEWEHWQRAEEVEMQGLIDNGVWTPVERPNNKLVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAASTIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVDIPGP-KIVDNFLAD---LRSGHKLKDLGDAIYYLGCRITRDRKERKLKIDQHLYAKSMAERFGI 197
            EP +  EA  SP+ + W  A + EM  +  N VW  V+ P  +  +    + K K   DG++++YK R+VA G  + +G+ + +  SP    AS  ++LS+   QD EL  +D + A+L   +D+E+++  P     +D+ +     L S  ++KD+G+A + LG +ITRDR ++ L + Q  Y K + ERF +
Sbjct:   78 EPASFSEALHSPDRDEWMTAMQEEMSSMDKNNVWELVDLPPGRKTIGNKWVLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHM 271          
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Match: A0A2N9F6S1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F6S1_FAGSY)

HSP 1 Score: 110 bits (274), Expect = 2.120e-24
Identity = 63/194 (32.47%), Postives = 107/194 (55.15%), Query Frame = 0
Query:    8 EPKNHWEAQTSPEWEHWQRAEEVEMQGLIDNGVWTPVERPNNKLVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAASTIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVDIPGP-KIVDNFLAD---LRSGHKLKDLGDAIYYLGCRITRDRKERKLKIDQHLYAKSMAERFGI 197
            EP +  EA  SP+ + W  A + EM  +  N VW  V+ P  +  +    + K K   DG++++YK R+VA G  + +G+ + +  SP    AS  ++LS+   QD EL  +D + A+L   +D+E+++  P     +D+ +     L S  ++KD+G+A + LG +ITRDR ++ L + Q  Y K + ERF +
Sbjct:  661 EPASFSEALHSPDRDEWMTAMQEEMSSMDKNNVWELVDLPPGRKTIGNKWVLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHM 854          
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Match: A0A6G0W7J2_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W7J2_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.430e-21
Identity = 52/140 (37.14%), Postives = 81/140 (57.86%), Query Frame = 0
Query:    6 LVEPKNHWEAQTSPEWEHWQRAEEVEMQGLIDNGVWTPVERPNNKLVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAASTIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVDIPGPKIVD 145
            + EP+N  EA + P+ +HWQ + + E+ GL+ NG W  VERP +  VVS   +YK K   +G ++K+K R+VA G  +  GV F +  +P    AS  ++ +LA      +RH+DF +AYL+A  D  +  ++P    VD
Sbjct: 1079 ITEPRNAKEALSGPQAKHWQESMQAELDGLVANGTWEVVERPPSGNVVSHKWVYKIKYDREGQIDKFKARLVARGFTQRYGVEFSKTFAPVIKQASVRVIFALAATLKRTVRHLDFPQAYLKAETDYPILFELPTSSGVD 1218          
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Match: A0A2N9J7K7_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J7K7_FAGSY)

HSP 1 Score: 100 bits (249), Expect = 4.580e-21
Identity = 60/194 (30.93%), Postives = 105/194 (54.12%), Query Frame = 0
Query:    8 EPKNHWEAQTSPEWEHWQRAEEVEMQGLIDNGVWTPVERPNNKLVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAASTIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVDIP-GPKIVDNFLAD---LRSGHKLKDLGDAIYYLGCRITRDRKERKLKIDQHLYAKSMAERFGI 197
            EP +  +A  SP+ + W  A + EM  +  N VW  V+ P  +  +    + K K   DG++++YK R+VA    + +G+ + +  SP    AS  ++LS+   QD EL  +D + A+L   +D+++++  P     +D+       L S  ++KD+G+A + LG +ITRDR ++ L + Q  Y K + ERF +
Sbjct:  492 EPASFNQAFHSPDRDEWMTAIQEEMSSMNKNNVWELVDLPPRRKTIGNKWVLKVKRKADGSIDRYKARLVAKCYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKIAFLNRELDEKIYMAQPTAGNDMDSIATTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHM 685          
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 99.4 bits (246), Expect = 1.230e-20
Identity = 49/132 (37.12%), Postives = 80/132 (60.61%), Query Frame = 0
Query:    8 EPKNHWEAQTSPEWEHWQRAEEVEMQGLIDNGVWTPVERPNNKLVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAASTIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVDIP 139
            EP++  EA  SP+W  WQ+A E EM+ L D+  +  VE P N  VV +  +++ K   +G +E YK R+VA G  +I G+ F++  +P    AS  ++L+LA   DW++  +D + AYL A +++E+F+  P
Sbjct:  959 EPRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQP 1090          
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Match: A0A438F607_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438F607_VITVI)

HSP 1 Score: 98.2 bits (243), Expect = 2.810e-20
Identity = 61/198 (30.81%), Postives = 100/198 (50.51%), Query Frame = 0
Query:    1 MRSDLLVEPKNHWEAQTSPEWEHWQRAEEVEMQGLIDNGVWTPVERPNNKLVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAASTIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVDIP-GPKIVDNFLADLRSGHKLKDLGDAIYYLGCRITRDRKERKLKIDQHLYAKSMAERFGI 197
            + S  +  P+N  EA   P+   W+ A + E+  L  NG W     P  K  V    ++  K   DGN+++YK R+VA G  +  G+ + E  +P     +  ++LSLA   DW L  +D + A+L   +++EV++DIP G +   NF  +     ++KDLG+  Y+LG  I R +K   + + QH Y   +    G+
Sbjct:  368 LASTEIQVPQNIQEAFKYPK---WKAAVDEEVWALEKNGTWEITNLPRCKKPVGCKWIFTVKYKADGNVDRYKARLVAKGFTQSYGIDYQETFAPVSKLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIPAGLETTSNFNKEF----EIKDLGNLKYFLGMEIARSKKG--IAVSQHKYVLDLLNETGM 556          
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Match: A0A438F419_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438F419_VITVI)

HSP 1 Score: 98.2 bits (243), Expect = 2.870e-20
Identity = 59/190 (31.05%), Postives = 99/190 (52.11%), Query Frame = 0
Query:    9 PKNHWEAQTSPEWEHWQRAEEVEMQGLIDNGVWTPVERPNNKLVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAASTIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVDIP-GPKIVDNFLADLRSGHKLKDLGDAIYYLGCRITRDRKERKLKIDQHLYAKSMAERFGI 197
            P+N  EA   P+   W+ A + E++ L  NG W   + P +K  V    ++  K   DGN+++YK R+VA G  +  G+ + E  +P     +  ++LSLA   DW L  +D + A+L   +++EV++DIP G +   NF  +     ++KDLG+  Y+LG  I R +K   + + Q  Y   +    G+
Sbjct:  635 PQNIHEAFKYPK---WKAAVDEEVRALEKNGTWEITDLPRDKKPVGCKWIFTVKYKADGNVDRYKARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIPAGLETTSNFNKEF----EIKDLGNLKYFLGMEIARSKKG--IAVSQRKYVLDLLNETGM 815          
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Match: A0A438CB29_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CB29_VITVI)

HSP 1 Score: 97.8 bits (242), Expect = 4.000e-20
Identity = 59/190 (31.05%), Postives = 98/190 (51.58%), Query Frame = 0
Query:    9 PKNHWEAQTSPEWEHWQRAEEVEMQGLIDNGVWTPVERPNNKLVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAASTIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVDIP-GPKIVDNFLADLRSGHKLKDLGDAIYYLGCRITRDRKERKLKIDQHLYAKSMAERFGI 197
            P+N  EA   P+   W+ A + E++ L  NG W   + P  K  V    ++  K   DGN+++YK R+VA G  +  G+ + E  +P     +  ++LSLA   DW L  +D + A+L   +++EV++DIP G +   NF  +     ++KDLG+  Y+LG  I R +K   + + Q  Y   +    G+
Sbjct:  613 PQNIQEAFKYPK---WKAAVDEEVRALEKNGTWEITDLPRGKKPVGCKWIFTVKYKTDGNVDRYKARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIPTGLEATSNFNKEF----EIKDLGNLKYFLGMEIARSKKG--IAVSQRKYVLDLLNETGM 793          
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Match: A0A1R3FZX8_COCAP (Reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3FZX8_COCAP)

HSP 1 Score: 97.1 bits (240), Expect = 7.360e-20
Identity = 51/163 (31.29%), Postives = 87/163 (53.37%), Query Frame = 0
Query:   22 EHWQRAEEVEMQGLIDNGVWTPVERPNNKLVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAASTIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVDIPG--PKIVDNFLADLRSG-----HKLKDLGDAIYYLGCRITRDRKE 177
            EHWQ A + ++  L +NG W     P  K  V +  +YK K   +G +E+YK R+VA G  +++GV FHE  +P     +   +L++A+ ++W++  +D   A+L   +D+EV++ IP    K  +  +  L+         +KDLG   Y+LG    R +K+
Sbjct:  442 EHWQEAMKKQIWALEENGTWVLTSLPPGKKAVDSKWVYKVKFKPNGEVERYKARLVAKGFTQVEGVDFHETFAPVAKLVTVRCLLAVAIKKNWDIHQLDVNNAFLHGDLDEEVYMQIPQGFAKEGETRVCKLQKSLYGLRFSIKDLGPLKYFLGIEAARSQKD 604          
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Match: A0A2P6UYW4_9CHLO (Gag-Pol poly n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYW4_9CHLO)

HSP 1 Score: 96.7 bits (239), Expect = 9.180e-20
Identity = 62/218 (28.44%), Postives = 102/218 (46.79%), Query Frame = 0
Query:    5 LLVEPKNHWEAQTSPEWEHWQRAEEVEMQGLIDNGVWTPVERPNNKLVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAASTIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVD-----------------------IPGPKIVDN--FLADLRSGHKLKDLGDAIYYLGCRITRDRKERKLKIDQHLYAKSMAERFGI 197
            +  EP    EA + P+   WQ A + EM  LI N  WT  E P+    +    +YK K   +GN+E+YK R+V  G R+ +G+ + E  +P    ++   +LS A  QD +L  +D + A+L   ID+EV+ D                       I  PK   +      L +  + +DL +A ++LG  + RDR  + +K+ Q    K +  ++G+
Sbjct:  226 IANEPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYADAGLFISTDPSKPAYLLTYVDDILIVTPKTTSSAAIKQKLMAAFEARDLDNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGM 443          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2789.7618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N9HLT2_FAGSY2.010e-2432.47Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9F6S1_FAGSY2.120e-2432.47Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A6G0W7J2_9STRA1.430e-2137.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9J7K7_FAGSY4.580e-2130.93Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A401GQU1_9APHY1.230e-2037.12Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A438F607_VITVI2.810e-2030.81Retrovirus-related Pol polyprotein from transposon... [more]
A0A438F419_VITVI2.870e-2031.05Retrovirus-related Pol polyprotein from transposon... [more]
A0A438CB29_VITVI4.000e-2031.05Retrovirus-related Pol polyprotein from transposon... [more]
A0A1R3FZX8_COCAP7.360e-2031.29Reverse transcriptase, RNA-dependent DNA polymeras... [more]
A0A2P6UYW4_9CHLO9.180e-2028.44Gag-Pol poly n=1 Tax=Micractinium conductrix TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 40..143
e-value: 5.3E-16
score: 59.0
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 9..139
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2789contigH-paniculata_contig2789:17495..18313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2789.7618.1mRNA_H-paniculata_contig2789.7618.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2789 17489..18463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2789.7618.1 ID=prot_H-paniculata_contig2789.7618.1|Name=mRNA_H-paniculata_contig2789.7618.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
MRSDLLVEPKNHWEAQTSPEWEHWQRAEEVEMQGLIDNGVWTPVERPNNK
LVVSTMMLYKRKLGEDGNLEKYKFRVVAHGNREIKGVHFHEASSPAPAAA
STIMMLSLAVIQDWELRHVDFEEAYLQAHIDQEVFVDIPGPKIVDNFLAD
LRSGHKLKDLGDAIYYLGCRITRDRKERKLKIDQHLYAKSMAERFGIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like