mRNA_H-paniculata_contig2786.7612.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2786.7612.1
Unique NamemRNA_H-paniculata_contig2786.7612.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Match: A0A6H5JN73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN73_9PHAE)

HSP 1 Score: 694 bits (1791), Expect = 3.480e-243
Identity = 354/515 (68.74%), Postives = 423/515 (82.14%), Query Frame = 3
Query:    3 GLKTSDVMSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFFNEVQHIKVEIFDHDTVTADDSLGVAVFTLGSLMASPGRSLITRLNKSSGAKAKGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVREDNEWQQVHKSEVIMNDLNPLWKPQYFSVQAICNGDYLRPLRVEVYDWDQDGSHDIIGIHTTNLRGLLKGQGHELALEVRKRLPRKSKGHLRVEHAEIEKRATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYITPGGRLNEYQQAILSIGTILQDYDHDKMFPVYGFGGRVGTREVSHCFPICRVSNAGASDEALGVQGILSAYSAALHNVTLAGPTLFSEVLQTAMARASSAESSQVFQRYDVALILTDGIINDMRETIDLLVGASNLPLSIVIVGVGGADFSDMNALDGDGQRLKDSAGFTATRDIVQFVPFSKYP-PEDRHGSRLAADTTAEIPGQLLAYFASKGIVPNPP 1544
            GLK +DV+S+SDP+AV  +   ++ GKV YTE+GRTETIGNTS+P+F  QFI+DFFFNE+Q++K  I+D D V+ DDSLG A FTLG+LM++PGRS+   L   SG  AKG M IRAEEVAS AD C+L++RGIKL NKDG+FGKSDP+FT++R+RED +WQQVHKSEVIMNDL+P W+PQ  SVQA+CNGDYLRPL++EV+DWD+DG HD +G   T+L+GLL+GQG E+ LE  K+  +K KG L+V+HAE+ ++ TLLE+LAGGLQI+M  AIDFTGSNG PSHPQSLHY+ P GRLN+YQQAI SIG ILQDYD DKMFPVYGFGGR+  + VSHCFPICRVS+AG S+EA GVQGIL AYSAA+ +V LAGPTLF+EVL+TAMARA+   S+Q  QRYDV LILTDGIINDM++TID LV ASNLPLS+VIVGVG ADFSDM+ LDGDG  L+DSA   ATRDIVQFVPFSKY   E   G+RLAADT AEIP QLL +F SK I PNPP
Sbjct:   14 GLKKADVLSKSDPFAVVKLGHTNKDGKVNYTEIGRTETIGNTSDPKFTKQFILDFFFNEIQYVK--IYDSDQVSDDDSLGKADFTLGALMSAPGRSITEALKDRSGRLAKGVMIIRAEEVASCADRCKLSLRGIKLKNKDGIFGKSDPFFTVSRLREDEKWQQVHKSEVIMNDLSPAWQPQDMSVQALCNGDYLRPLQLEVWDWDRDGDHDCMGRLKTSLQGLLEGQGREMDLEHPKK-DKKGKGQLKVDHAEVHRQPTLLEYLAGGLQISMTCAIDFTGSNGSPSHPQSLHYLDPSGRLNQYQQAIWSIGHILQDYDSDKMFPVYGFGGRINGQPVSHCFPICRVSHAGGSEEAYGVQGILEAYSAAMTSVQLAGPTLFTEVLETAMARANRP-STQADQRYDVLLILTDGIINDMQQTIDSLVAASNLPLSVVIVGVGQADFSDMSRLDGDGGMLEDSARTKATRDIVQFVPFSKYNLAEGGMGARLAADTMAEIPDQLLKFFRSKAITPNPP 524          
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Match: A0A6S8D6G1_9STRA (Hypothetical protein n=4 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8D6G1_9STRA)

HSP 1 Score: 432 bits (1110), Expect = 5.350e-140
Identity = 234/521 (44.91%), Postives = 333/521 (63.92%), Query Frame = 3
Query:    6 LKTSDVMSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFFNEVQHIKVEIFDHDTVTADDSLGVAVFTLGSLMASPGRSLITRLNKSSGAKAKGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVREDNEWQQVHKSEVIMNDLNPLWKPQYFSVQAICNGDYLRPLRVEVYDWDQDGSHDIIGIHTTNLRGLL---KGQGHELALEVRKRLPRK---SKGHLRVEHAEIEKRATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYITPG-GRLNEYQQAILSIGTILQDYDHDKMFPVYGFGGRV-GTREVSHCFPIC-RVSNAGASDEALGVQGILSAYSAALHNVTLAGPTLFSEVLQTAMARASSAESSQVFQRYDVALILTDGIINDMRETIDLLVGASNLPLSIVIVGVGGADFSDMNALDGDGQRLKDSAGFTATRDIVQFVPFSKYPPEDRHGSRLAADTTAEIPGQLLAYFASKGIVPNP 1541
            L   D+ S +DP+ + ++          + E GRTE + +++NP+F  QF++D+ F E+Q ++V++FD D  T  D +G   FT+G LM S G++L   L+     + +  +  RAE VA  +D   LT+ G  L NKDG FGKSDP+  I R RE NEW  V+K+EV+ ++LNP W+P   S+Q +CNGD  RP+R  VYDW++ G H  IG  TT +  +L   + + +E+  E R+    K   + G +++E+ ++EK  TLLE++ GG+QI+M+  +DFTGSNGDP +PQSLHY++P  G+LN Y+ A+ S+G I+ DYD DK+ P YGFG    GT   +HCFP+   +SN        GV G+L  Y  AL +V L+GPTLFS +LQ A+ + S+ E +Q  Q Y + +ILTDGIIND+ ETI ++V AS+LP+SI+IVGVG ADFS M ALD D + L+D  G  A RDIVQFVPFSK+  +   G+ LA +  AEIP Q++ +   K I PNP
Sbjct:   19 LPRLDLKSETDPFCIVYMRN---NRNTKWLEYGRTEVVRDSANPDFVKQFVIDYHFEELQEVRVDMFDEDKYTKPDYVGSCEFTVGQLMGSRGQTLKLDLSNPKRKRQQSLLIARAEVVAVNSDILNLTVFGKGLDNKDGWFGKSDPFLQIERSREGNEWVAVYKTEVVRDNLNPKWQPLSLSMQKLCNGDVHRPIRFIVYDWEKSGKHQFIGQFTTTVDRILAYKENKPYEVINEARRMKKGKKYVNSGTIQMENVQLEKGYTLLEYIRGGMQISMITVVDFTGSNGDPRYPQSLHYLSPNPGQLNFYEAALQSVGQIVIDYDTDKLVPCYGFGALTPGTNVANHCFPLSFNMSNPAV----YGVNGMLQIYRHALRSVVLSGPTLFSGILQEAIRQCSAHEITQQNQNYSILMILTDGIINDLDETIAMIVHASHLPMSIIIVGVGSADFSTMEALDSDERLLRDRNGNVACRDIVQFVPFSKFGGD---GTLLAKEVLAEIPKQIVGFMRMKRIRPNP 529          
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Match: A0A3M6VV90_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VV90_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 7.340e-132
Identity = 247/542 (45.57%), Postives = 329/542 (60.70%), Query Frame = 3
Query:    3 GLKTSDVMSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFFNEVQHIKVEIFDHDTVTA----DDSLGVAVFTLGSLMASPGRSLITRLNKSSGAKA-----KGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVREDN-------EWQQVHKSEVIMNDLNPLWKPQYFSVQAICNGDYLRPLRVEVYDWDQDGSHDIIGIHTTNLRGLLKGQGHELAL-----EVRKRLPRKSKGHLRVEHAEIEKRATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYITPG--GRLNEYQQAILSIGTILQDYDHDKMFPVYGFGGRVGTREVSHCFPICRVSNAGASDEALGVQGILSAYSAALHNVTLAGPTLFSEVLQ--TAMARASSAESSQVFQ---RYDVALILTDGIINDMRETIDLLVGASNLPLSIVIVGVGGADFSDMNALDGDGQRLKDSAGFTATRDIVQFVPFSKYPPEDRHGSRLAADTTAEIPGQLLAYFASKGIVPNPP 1544
            GLK SD +SRSDP+ V ++++A +KG   + E+GRTETI NT +P FA  F VDFFF E+Q ++ E+FD D+ +      D LG    T+G LM+S G+S + +L ++   K       G + I AEEV++ AD   +     KL NKDG FG SDP+  I R+R++N        W  V +SEVIMN+ NP W+    S+Q +CNG+  R L++E  DW+++G H  IG  T      + G    L L     + RK    K+ G L +E  E  KR T  E+L GG +I+++V ID+T SNG PS P SLHY      G+ N+YQ AI + G IL+ YD DK FPVYGFGG V    V+HCFP+   S+     E  GV+GILSAY  +   V L GPT+F+ +++   A+AR  SA + Q      +Y V LI+TDG I DM++TID LV AS LPLSIVIV VG ADF+ M+ALD DG+ L DS    A RDIVQFVPF+++    R+ +RLA +T AEIP QLL Y+  KGI P  P
Sbjct:  120 GLKNSDFLSRSDPFIVLYMQEAQKKG---WREVGRTETINNTLDPTFAKSFQVDFFFEEIQRLRFEVFDRDSASERLSDHDFLGCVEITMGQLMSSKGQSAVLKLLQNDNGKGHVYNLSGHVVIDAEEVSTCADMVNIRFTATKLDNKDGWFGASDPFLNIYRLRDENADPLAPTSWVLVWRSEVIMNNCNPKWRRATLSIQTLCNGNLSRLLKIECMDWEKNGKHQFIGSCTVKAAEFVTGDVRSLELINRDIQARKGKRYKNSGVLVLEQIEYFKRRTFAEYLRGGCEISLIVGIDYTASNGSPSDPASLHYTGASYYGQANDYQAAISATGAILESYDSDKRFPVYGFGGLVNGA-VNHCFPLTFDSS---QPEVEGVEGILSAYLNSFQFVQLHGPTMFAPLVRQAAAIARTFSAPAEQGAGDNLKYFVLLIITDGAIMDMQQTIDELVQASILPLSIVIVAVGNADFTAMDALDADGKLLVDSRRQKAARDIVQFVPFNQF---RRNPARLATETLAEIPTQLLQYYNMKGITPRTP 651          
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Match: W2KQS4_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2KQS4_PHYPR)

HSP 1 Score: 412 bits (1060), Expect = 7.800e-131
Identity = 247/542 (45.57%), Postives = 336/542 (61.99%), Query Frame = 3
Query:    3 GLKTSDVMSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFFNEVQHIKVEIFDHDTVT---AD-DSLGVAVFTLGSLMASPGRSLITRLNKSSGAKA-----KGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVREDNE-------WQQVHKSEVIMNDLNPLWKPQYFSVQAICNGDYLRPLRVEVYDWDQDGSHDIIGIHTTNLRGLLKGQGHELALEVRKRLPRKSK-----GHLRVEHAEIEKRATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYITPG--GRLNEYQQAILSIGTILQDYDHDKMFPVYGFGGRVGTREVSHCFPICRVSNAGASDEALGVQGILSAYSAALHNVTLAGPTLFSEVLQ--TAMARASSAESSQVFQ---RYDVALILTDGIINDMRETIDLLVGASNLPLSIVIVGVGGADFSDMNALDGDGQRLKDSAGFTATRDIVQFVPFSKYPPEDRHGSRLAADTTAEIPGQLLAYFASKGIVPNPP 1544
            GLK SD +S+SDP+ V ++++A +KG   + E+GRTETI NT +P FA  F VDFFF EVQ ++VE+FD D+ +   AD D LG    T+G LM+S G+S + +L ++   +       G + I AEEV+S AD  ++     KL NKDG FG SDP+  I R+R++N        W  V +SEV+MN+ +P W+P   SVQ +CNGD  + L++E  DW+++G H  IG  T      + G+   + L  R+R  +K K     G L +E  E+ K+ T  E+L GG +++++V ID+T SNG PS P SLHY+     G++N+YQ AI + G IL+ YD DK FPVYGFGG V +  V+HCFP+    +     E  G+ GI+ AYS +   V L GPT F+ ++    A+AR  SA + Q      +Y V LI+TDG I DM+ETID LV AS LPLSIVIV VG ADF+ MNALD DG+ L DS    A RDIVQFVPF+++    R+ +RLA +T AEIP QLL Y+  KGI P  P
Sbjct:  167 GLKKSDFLSQSDPFIVVYMQEAQRKG---WREVGRTETINNTPDPTFAKSFQVDFFFEEVQRLRVEVFDRDSSSERLADHDFLGCVEITMGQLMSSKGQSAVLKLLQNDNGRGHVHNLSGHVVIDAEEVSSCADMVKVRFTATKLDNKDGWFGASDPFLNIYRLRDENSDPLSSSSWILVWRSEVVMNNCDPKWRPATISVQNLCNGDLSKLLKIECMDWEKNGKHQFIGSCTIKAAEFVTGELRSMDLINRERQAKKGKRYKNSGMLILEQIEMFKQHTFAEYLRGGCEVSLIVGIDYTASNGSPSDPSSLHYMGGNYQGQMNDYQAAISATGAILEPYDSDKRFPVYGFGGLV-SGVVNHCFPLTFDPS---QPEVEGIGGIMKAYSDSFQFVQLHGPTKFAPLVHQAAAIARTFSAPAEQGGGGNLKYFVLLIITDGAIMDMQETIDELVQASTLPLSIVIVAVGNADFTAMNALDADGKVLIDSRRQRAARDIVQFVPFNQF---RRNPARLAKETLAEIPTQLLQYYNMKGINPRTP 698          
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Match: A0A7S2SLX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLX7_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 1.400e-129
Identity = 229/524 (43.70%), Postives = 327/524 (62.40%), Query Frame = 3
Query:    3 GLKTSDVMSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFFNEVQHIKVEIFDHDT-----VTADDSLGVAVFTLGSLMASPGRSLITRLNKSSGAKAKGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVREDNEWQQVHKSEVIMNDLNPLWK-PQYFSVQAICNGDYLRPLRVEVYDWDQDGSHDIIGIHTTNLRGLLKGQGHELALEVRKRLPRKSKGHLRVEHAEIEKRATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYITPGGR-LNEYQQAILSIGTILQDYDHDKMFPVYGFGGRVGTR-EVSHCFPICRVSNAGASDEAL-GVQGILSAYSAALHNVTLAGPTLFSEVLQ-TAMARASSAESSQVFQRYDVALILTDGIINDMRETIDLLVGASNLPLSIVIVGVGGADFSDMNALDGDGQRLKDSAGFTATRDIVQFVPFSKY---PPEDRHGSRLAADTTAEIPGQLLAYFASKGIVP 1535
            GLK  D  S+SDP+ V +I +         TE+GRTE + NT  P FA   +VD+FF E+Q + V ++D D      +   D  G A F +G LM+S  ++L   L K   A   GS+ + AEE  S +++  L ++G KL NKDG+FGKSDP+F I R RED  +  V++S  +MN+L+P W   +  S+Q++CNGDY RPLR+EV+DW+ +G+HD +G   T++R L+      L +E +K   RKS G ++V+ A I K +T L+++ GG ++NM++ +DFTGSNG+P+ P SLHYI    R +N+Y++ I  + ++L+ YD D++FPVYGFGGR     +VSHCFP+    N    D  + GV+G++ AY  AL    L+GPT+FS+++  TA       E S++   Y + LI+TDG+I D+  T   +V AS+LP SI+IVGVG +DFS M ALD D QRL D+ G  A RDIVQFV F  +   PP      RLA +T  E+P Q+L YF SKG+ P
Sbjct:   41 GLKKMDFGSKSDPFCVVYIGE---------TEVGRTEVVKNTQAPIFAKSILVDYFFEELQQVSVVVYDEDRPRDPDLRRHDLQGQATFAMGELMSSRNQTLSRLLVKGKRAGGLGSVVVTAEEATSSSEFLSLRLKGSKLLNKDGIFGKSDPFFVIYRSREDGSYVSVYRSVHVMNNLSPAWPVAKRISIQSLCNGDYDRPLRLEVWDWNSNGTHDFMGSGETSVRALVDQTPIPL-VETKKSGKRKSAGTIQVQEARISKYSTFLDYIKGGWELNMVMGVDFTGSNGNPADPASLHYIDVSQRRMNQYERTIRGLASVLRQYDQDQLFPVYGFGGRSAAGGKVSHCFPL----NGNPKDPYVQGVEGVIHAYHQALTQWGLSGPTVFSQIINATANMCRGFVEDSEM--TYTILLIITDGVITDLEATKTAIVAASDLPFSIIIVGVGDSDFSAMEALDSDDQRLSDAHGRVARRDIVQFVRFLDFATAPP-----GRLAKETLVELPHQMLGYFTSKGLPP 543          
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Match: A0A5D6XEK5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XEK5_9STRA)

HSP 1 Score: 406 bits (1043), Expect = 5.620e-128
Identity = 244/539 (45.27%), Postives = 333/539 (61.78%), Query Frame = 3
Query:    3 GLKTSDVMSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFFNEVQHIKVEIFDHDT----VTADDSLGVAVFTLGSLMASPGRSLI-TRLNKSSGAK----AKGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVRED-------NEWQQVHKSEVIMNDLNPLWKPQYFSVQAICNGDYLRPLRVEVYDWDQDGSHDIIGIHTTNLRGLLKGQGHELALEVRKRLPRKSK-----GHLRVEHAEIEKRATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYI--TPGGRLNEYQQAILSIGTILQDYDHDKMFPVYGFGGRVGTREVSHCFPICRVSNAGASDEALGVQGILSAYSAALHNVTLAGPTLFSEVLQTAMARAS--SAESSQVFQRYDVALILTDGIINDMRETIDLLVGASNLPLSIVIVGVGGADFSDMNALDGDGQRLKDSAGFTATRDIVQFVPFSKYPPEDRHGSRLAADTTAEIPGQLLAYFASKGIVPNPP 1544
            GLK SD+ S SDP+ V ++E+    G  T+ E+GRTET+ NT+NP F   F VD+FF EVQ ++VE FD D+    ++A D LG    T+G LM++ G+S++ + L K SG        G + I AEEV++ +D  R+   G KL NKDG FG SDP+  I R++++       + W  V KSE IM++LNP W+    SVQA+CNG+  R L+ E  DW+  G H +IG+       L+ G+   L L  R+R  RK K     G L+V   E  K+ T  EFL GG +I+++V ID+T SNG PS   SLH++     G++N+YQ AI + G IL+ YD D+ FP YGFGG V    VSHCFP+    +     E  GV+GI+ AY+ +   V+L GPT F+ ++  A + A+  S +      +Y V LI+TDG I DM++TID +V AS LPLSIVIVGVG A+FS M+ LDGDG+ L DS   TA RDIVQFVPF+++     + SRLA +T AEIP QL+ +F +KGI PNPP
Sbjct:  190 GLKKSDITSESDPFLVVYMEE----GGRTWREIGRTETVVNTANPTFTKAFHVDYFFEEVQRLRVEAFDRDSASEKLSAHDFLGCVELTMGQLMSAKGQSMVLSLLQKDSGRHHVRGLSGHVVISAEEVSTCSDMIRVQFAGEKLDNKDGWFGASDPFLNIYRLKDETANPDAADSWLHVWKSETIMDNLNPRWRMTTLSVQALCNGNLTRKLKFECMDWENSGRHQLIGVAMMTAGELVTGEKQRLELINRERQLRKGKRYKNSGVLKVLQLESFKQHTFAEFLRGGCEISLIVGIDYTASNGAPSDMSSLHFLGGNYAGQMNDYQAAIRATGAILEPYDADRKFPTYGFGGMVNG-VVSHCFPLTFDPS---QPEVEGVEGIMQAYANSFGFVSLHGPTNFAPLVHQAASIAAHFSQQGGGQCLKYFVLLIITDGEIMDMQQTIDAIVEASALPLSIVIVGVGNANFSAMDTLDGDGKLLIDSRHRTAARDIVQFVPFNQF---RSNPSRLAKETLAEIPLQLVQHFRAKGINPNPP 717          
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Match: A0A8K1CN76_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CN76_PYTOL)

HSP 1 Score: 404 bits (1038), Expect = 8.030e-128
Identity = 235/528 (44.51%), Postives = 339/528 (64.20%), Query Frame = 3
Query:    6 LKTSDVMSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFFNEVQHIKVEIFDHDTVTAD----DSLGVAVFTLGSLMASPGRS---LITRLNKSSGAKAKGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVREDNEWQQVHKSEVIMNDLNPLWKPQYFSVQAICNGDYLRPLRVEVYDWDQDGSHDIIGIHTTNLRGLLKGQGHELAL---EVRKRLPRK--SKGHLRVEHAEIEKRATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYITPGGRLNEYQQAILSIGTILQDYDHDKMFPVYGFGG-RVGTREVSHCFPICRVSNAGASD-EALGVQGILSAYSAALHNVTLAGPTLFSEVLQTAMARASSAESSQVFQRYDVALILTDGIINDMRETIDLLVGASN-LPLSIVIVGVGGADFSDMNALDGDGQRLKDSAGFTATRDIVQFVPFSKYPPEDRHGSRLAADTTAEIPGQLLAYFASKGIVPNPP 1544
            LK  D++S+SDP+A+  I++ +     ++ +LG TE++ +  NP++A  F+VDF+F   Q +KV ++D D+ +++    D +G   F+LG LM +PG+S   L+TR  K  G K +GS+ ++AEE    A+  RL      L N DGLF KSDP+  I+R RED  W  VHK+EVI N+LNP W+     VQ ICNGDY RPL ++  D D  G   +IG   T+L  +L  +G    L   E++++ P+K  + G L    A++ ++ T +++L GGL++N+++ ID+T SNG  + P+SLH+I P G  N+YQ AI + G+IL+ YD DKM PVYGFGG     R+V HCFP+    N   S+ E  GVQG++  YS++L+++ L GPT F+ ++Q  +A ASS    +  Q+Y V +I+TDG I DM  TID LV ASN +PLSIVI+GVG ADFS M+ALDGDG++L+ S G  A+RDIVQFVP+S++     + + L  +T AEIP QL  Y   +GI PNPP
Sbjct:   22 LKDRDIVSKSDPFAILFIQQQN-----SWVKLGETESLKDDLNPKWAKLFLVDFYFQAQQRLKVVVYDKDSSSSNLREQDLIGSTEFSLGQLMGAPGQSGSFLLTRHAK--GGKHQGSLLVKAEEAKQSAEVVRLRFSASGLANMDGLFSKSDPFLVISRQREDGTWILVHKTEVIDNNLNPNWRTFEVPVQKICNGDYRRPLLLQAMDEDSGGRSQLIGQVMTSLEEILNKRGSNYVLHNEELQRKKPKKYTNAGLLIAHEAQVYRQHTFIDYLRGGLEMNLVLGIDYTASNGPANDPRSLHFIDPRG-WNQYQLAIHATGSILEPYDSDKMIPVYGFGGIPPNARDVDHCFPL----NLNPSNPEVHGVQGVMQLYSSSLYHIRLHGPTCFAPLIQQTIAVASSLNDPRK-QKYFVLMIVTDGAIMDMPATIDTLVHASNTVPLSIVIIGVGPADFSSMHALDGDGKQLRASNGQRASRDIVQFVPYSRFA---GNPAALTQETLAEIPNQLCQYMRVRGINPNPP 533          
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Match: A0A484E0I1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0I1_BRELC)

HSP 1 Score: 402 bits (1034), Expect = 4.790e-127
Identity = 246/542 (45.39%), Postives = 329/542 (60.70%), Query Frame = 3
Query:    3 GLKTSDVMSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFFNEVQHIKVEIFDHDT----VTADDSLGVAVFTLGSLMASPGRSLITRLNKSSGAKA-----KGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVRE-------DNEWQQVHKSEVIMNDLNPLWKPQYFSVQAICNGDYLRPLRVEVYDWDQDGSHDIIGIHTTNLRGLLKGQGHELALEVRKRLPRKSK-----GHLRVEHAEIEKRATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYITPG--GRLNEYQQAILSIGTILQDYDHDKMFPVYGFGGRVGTREVSHCFPICRVSNAGASDEALGVQGILSAYSAALHNVTLAGPTLFSEVLQ--TAMARASSAESSQVFQ---RYDVALILTDGIINDMRETIDLLVGASNLPLSIVIVGVGGADFSDMNALDGDGQRLKDSAGFTATRDIVQFVPFSKYPPEDRHGSRLAADTTAEIPGQLLAYFASKGIVPNPP 1544
            GLK SD +S+SDP+ V ++++A  KG   + E+G+TETI NT+NP F   F VDFFF EVQ ++VE+FD D+    ++  D LG    T+G LMAS G+S + ++ ++   +       G + I AEEV S AD   +     KL NKDG FG SDP+  I R+R+       +  W  V +SEVIMN+ NP W+     VQ +CNG+  R L++E  DW++ G H  IG  T     L+ G+   + L  R+R  RK K     G L VE  E++K+ T  EFL GG +++++V ID+T SNG+PS P SLHY+     G++N+YQ AI + G IL+ YD DK FPVYGFGG V      HCFP+    +     E  G+ GIL AYS +   V L GPT F+ ++   +A++RA SA + Q      +Y V LI+TDG I DM+ETID LV AS LPLSIVIV VG ADF+ M+ALD DG+ L DS    A RDIVQFVPF+++     + +RLA +T AEIP QLL YF  KGI P  P
Sbjct:  161 GLKKSDFLSQSDPFIVVYMQEAQTKG---WKEVGQTETINNTANPVFVKTFQVDFFFEEVQRLRVEVFDRDSPSEKLSDHDFLGCVEITMGQLMASKGQSAVLQVLQNDKKRGHVHYLSGHVIIDAEEVKSCADIVHVRFSATKLDNKDGWFGASDPFLNIYRLRDAQSDPLAETSWILVWRSEVIMNNCNPKWRHATIGVQTLCNGELSRLLKIECMDWERSGMHQFIGSCTVKTIELVTGELRSINLINRERQLRKGKRYKNSGVLVVEQIELQKQHTFAEFLRGGCEVSLIVGIDYTASNGNPSDPLSLHYLGGNYQGQMNDYQAAIAATGAILEPYDSDKHFPVYGFGGLVNG-VADHCFPLTFDPS---QPEVDGLGGILKAYSDSFQFVHLHGPTKFAPLVHQASAISRAFSAPAEQGGHGNLKYFVLLIITDGAIMDMQETIDELVQASTLPLSIVIVAVGNADFTAMSALDADGKVLIDSRRQRAARDIVQFVPFNQF---RSNPARLAKETLAEIPTQLLQYFNMKGIHPRAP 692          
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Match: G4ZLG8_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4ZLG8_PHYSP)

HSP 1 Score: 412 bits (1058), Expect = 9.640e-127
Identity = 247/542 (45.57%), Postives = 334/542 (61.62%), Query Frame = 3
Query:    3 GLKTSDVMSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFFNEVQHIKVEIFDHDTVT---AD-DSLGVAVFTLGSLMASPGRSLITRLNKSSGAKA-----KGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVREDN-------EWQQVHKSEVIMNDLNPLWKPQYFSVQAICNGDYLRPLRVEVYDWDQDGSHDIIGIHTTNLRGLLKGQGHELALEVRKRLPRKSK-----GHLRVEHAEIEKRATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYITPG--GRLNEYQQAILSIGTILQDYDHDKMFPVYGFGGRVGTREVSHCFPICRVSNAGASDEALGVQGILSAYSAALHNVTLAGPTLFSEVLQ--TAMARASSAESSQVFQ---RYDVALILTDGIINDMRETIDLLVGASNLPLSIVIVGVGGADFSDMNALDGDGQRLKDSAGFTATRDIVQFVPFSKYPPEDRHGSRLAADTTAEIPGQLLAYFASKGIVPNPP 1544
            GLK SD +S+SDP+ V ++++A ++G   + E+GRTETI N+ +P FA    VDFFF EVQ ++VE+FD D+ +   AD D LG    T+G LM+S G+S + RL ++   +       G + I AEEV++ AD   +   G KL NKDG FG SDP+  I R+R++N        W  V +SEV+MND +P W+    SVQ +CNG+  R L++E  DW+++G H  IG  T      + G+   + L  R+R  +K K     G L +E  E+ KR T  E+L GG +++++V ID+T SNG PS P SLHY   G  G+LN+YQ AI + G IL+ YD DK FPVYGFGG V    V+HCFP+    +     E  G+ GI+SAYS +   V L GPT+F+ ++    A+AR  SA + Q      +Y V LI+TDG I DM++TID LV AS LPLSIVIV VG ADF+ MNALD D + L DS    A RDIVQFVPF+++    R+ +RLA +T AEIP QLL Y+  KGI P  P
Sbjct:  134 GLKKSDFLSQSDPFIVLYMQEAQKRG---WREVGRTETIQNSPDPTFAKSVQVDFFFEEVQRLRVEVFDRDSSSERLADHDFLGCVEITMGQLMSSKGQSAVLRLLQNDRDRGHVHNLSGHVVIDAEEVSTCADMINVRFTGTKLDNKDGWFGASDPFLNIYRLRDENADPLTTTSWSLVWRSEVVMNDCDPKWRRATLSVQTLCNGNLSRLLKIECMDWEKNGKHQFIGSCTVKAAEFVTGEIRSMELINRERQAKKGKRYKNSGVLVLEQIELFKRHTFAEYLRGGCEVSLIVGIDYTASNGSPSDPSSLHYTGAGYQGQLNDYQAAISATGAILEPYDSDKRFPVYGFGGLVNGA-VNHCFPLTFDPS---QPEVEGINGIMSAYSNSFQFVQLHGPTMFAPLVHQAAAIARTFSAPAEQGGGGNLKYFVLLIITDGAIMDMQQTIDELVQASTLPLSIVIVAVGNADFTAMNALDSDDKLLVDSRRQRAARDIVQFVPFNQF---RRNPARLAKETLAEIPTQLLQYYNMKGIQPRTP 665          
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Match: A0A0W8CIM0_PHYNI (Copine-4 n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CIM0_PHYNI)

HSP 1 Score: 412 bits (1060), Expect = 1.720e-126
Identity = 247/542 (45.57%), Postives = 336/542 (61.99%), Query Frame = 3
Query:    3 GLKTSDVMSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFFNEVQHIKVEIFDHDTVT---AD-DSLGVAVFTLGSLMASPGRSLITRLNKSSGAKA-----KGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVREDNE-------WQQVHKSEVIMNDLNPLWKPQYFSVQAICNGDYLRPLRVEVYDWDQDGSHDIIGIHTTNLRGLLKGQGHELALEVRKRLPRKSK-----GHLRVEHAEIEKRATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYITPG--GRLNEYQQAILSIGTILQDYDHDKMFPVYGFGGRVGTREVSHCFPICRVSNAGASDEALGVQGILSAYSAALHNVTLAGPTLFSEVLQ--TAMARASSAESSQVFQ---RYDVALILTDGIINDMRETIDLLVGASNLPLSIVIVGVGGADFSDMNALDGDGQRLKDSAGFTATRDIVQFVPFSKYPPEDRHGSRLAADTTAEIPGQLLAYFASKGIVPNPP 1544
            GLK SD +S+SDP+ V ++++A +KG   + E+GRTETI NT +P FA  F VDFFF EVQ ++VE+FD D+ +   AD D LG    T+G LM+S G+S + +L ++   +       G + I AEEV+S AD  ++     KL NKDG FG SDP+  I R+R++N        W  V +SEV+MN+ +P W+P   SVQ +CNGD  + L++E  DW+++G H  IG  T      + G+   + L  R+R  +K K     G L +E  E+ K+ T  E+L GG +++++V ID+T SNG PS P SLHY+     G++N+YQ AI + G IL+ YD DK FPVYGFGG V +  V+HCFP+    +     E  G+ GI+ AYS +   V L GPT F+ ++    A+AR  SA + Q      +Y V LI+TDG I DM+ETID LV AS LPLSIVIV VG ADF+ MNALD DG+ L DS    A RDIVQFVPF+++    R+ +RLA +T AEIP QLL Y+  KGI P  P
Sbjct:  167 GLKKSDFLSQSDPFIVVYMQEAQRKG---WREVGRTETINNTPDPTFAKSFQVDFFFEEVQRLRVEVFDRDSSSERLADHDFLGCVEITMGQLMSSKGQSAVLKLLQNDNGRGHVHNLSGHVVIDAEEVSSCADMVKVRFTATKLDNKDGWFGASDPFLNIYRLRDENSDPLSSSSWILVWRSEVVMNNCDPKWRPATISVQNLCNGDLSKLLKIECMDWEKNGKHQFIGSCTIKAAEFVTGELRSMDLINRERQAKKGKRYKNSGMLILEQIEMFKQHTFAEYLRGGCEVSLIVGIDYTASNGSPSDPSSLHYMGGNYQGQMNDYQAAISATGAILEPYDSDKRFPVYGFGGLV-SGVVNHCFPLTFDPS---QPEVEGIGGIMKAYSDSFQFVQLHGPTKFAPLVHQAAAIARTFSAPAEQGGGGNLKYFVLLIITDGAIMDMQETIDELVQASTLPLSIVIVAVGNADFTAMNALDADGKVLIDSRRQRAARDIVQFVPFNQF---RRNPARLAKETLAEIPTQLLQYYNMKGINPRTP 698          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2786.7612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN73_9PHAE3.480e-24368.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S8D6G1_9STRA5.350e-14044.91Hypothetical protein n=4 Tax=Aplanochytrium stocch... [more]
A0A3M6VV90_9STRA7.340e-13245.57Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
W2KQS4_PHYPR7.800e-13145.57Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A7S2SLX7_9STRA1.400e-12943.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5D6XEK5_9STRA5.620e-12845.27Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A8K1CN76_PYTOL8.030e-12844.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484E0I1_BRELC4.790e-12745.39Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G4ZLG8_PHYSP9.640e-12745.57Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A0W8CIM0_PHYNI1.720e-12645.57Copine-4 n=2 Tax=Phytophthora nicotianae TaxID=479... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2786contigH-paniculata_contig2786:2946..16355 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score675.2
Seed ortholog evalue3e-191
Seed eggNOG ortholog2880.D7G742
Hectar predicted targeting categoryother localisation
EggNOG free text desc.negative regulation of response to water deprivation
EggNOG OGsKOG1327@1,KOG1327@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons11
Model size2109
Cds size1959
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929842.2221854-UTR-H-paniculata_contig2786:2945..30721622929842.2221854-UTR-H-paniculata_contig2786:2945..3072Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2786 2946..3072 -
1691481035.1982467-UTR-H-paniculata_contig2786:2945..30721691481035.1982467-UTR-H-paniculata_contig2786:2945..3072Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2786 2946..3072 -
1622929842.426765-UTR-H-paniculata_contig2786:16332..163551622929842.426765-UTR-H-paniculata_contig2786:16332..16355Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2786 16333..16355 -
1691481035.3104877-UTR-H-paniculata_contig2786:16332..163551691481035.3104877-UTR-H-paniculata_contig2786:16332..16355Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2786 16333..16355 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929842.2373374-CDS-H-paniculata_contig2786:3072..36121622929842.2373374-CDS-H-paniculata_contig2786:3072..3612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 3073..3612 -
1691481035.211468-CDS-H-paniculata_contig2786:3072..36121691481035.211468-CDS-H-paniculata_contig2786:3072..3612Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 3073..3612 -
1622929842.2522001-CDS-H-paniculata_contig2786:4176..42811622929842.2522001-CDS-H-paniculata_contig2786:4176..4281Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 4177..4281 -
1691481035.2192872-CDS-H-paniculata_contig2786:4176..42811691481035.2192872-CDS-H-paniculata_contig2786:4176..4281Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 4177..4281 -
1622929842.2699966-CDS-H-paniculata_contig2786:5200..52781622929842.2699966-CDS-H-paniculata_contig2786:5200..5278Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 5201..5278 -
1691481035.2269356-CDS-H-paniculata_contig2786:5200..52781691481035.2269356-CDS-H-paniculata_contig2786:5200..5278Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 5201..5278 -
1622929842.28682-CDS-H-paniculata_contig2786:6854..70771622929842.28682-CDS-H-paniculata_contig2786:6854..7077Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 6855..7077 -
1691481035.23683-CDS-H-paniculata_contig2786:6854..70771691481035.23683-CDS-H-paniculata_contig2786:6854..7077Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 6855..7077 -
1622929842.304116-CDS-H-paniculata_contig2786:7541..78581622929842.304116-CDS-H-paniculata_contig2786:7541..7858Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 7542..7858 -
1691481035.2445736-CDS-H-paniculata_contig2786:7541..78581691481035.2445736-CDS-H-paniculata_contig2786:7541..7858Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 7542..7858 -
1622929842.3244321-CDS-H-paniculata_contig2786:8669..88281622929842.3244321-CDS-H-paniculata_contig2786:8669..8828Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 8670..8828 -
1691481035.2522538-CDS-H-paniculata_contig2786:8669..88281691481035.2522538-CDS-H-paniculata_contig2786:8669..8828Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 8670..8828 -
1622929842.338753-CDS-H-paniculata_contig2786:10728..107971622929842.338753-CDS-H-paniculata_contig2786:10728..10797Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 10729..10797 -
1691481035.266561-CDS-H-paniculata_contig2786:10728..107971691481035.266561-CDS-H-paniculata_contig2786:10728..10797Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 10729..10797 -
1622929842.3546627-CDS-H-paniculata_contig2786:11111..112711622929842.3546627-CDS-H-paniculata_contig2786:11111..11271Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 11112..11271 -
1691481035.2746167-CDS-H-paniculata_contig2786:11111..112711691481035.2746167-CDS-H-paniculata_contig2786:11111..11271Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 11112..11271 -
1622929842.3667867-CDS-H-paniculata_contig2786:11932..120691622929842.3667867-CDS-H-paniculata_contig2786:11932..12069Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 11933..12069 -
1691481035.2833982-CDS-H-paniculata_contig2786:11932..120691691481035.2833982-CDS-H-paniculata_contig2786:11932..12069Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 11933..12069 -
1622929842.3904781-CDS-H-paniculata_contig2786:15191..152911622929842.3904781-CDS-H-paniculata_contig2786:15191..15291Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 15192..15291 -
1691481035.2918475-CDS-H-paniculata_contig2786:15191..152911691481035.2918475-CDS-H-paniculata_contig2786:15191..15291Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 15192..15291 -
1622929842.4059942-CDS-H-paniculata_contig2786:16261..163321622929842.4059942-CDS-H-paniculata_contig2786:16261..16332Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 16262..16332 -
1691481035.3004215-CDS-H-paniculata_contig2786:16261..163321691481035.3004215-CDS-H-paniculata_contig2786:16261..16332Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2786 16262..16332 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2786.7612.1prot_H-paniculata_contig2786.7612.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2786 3073..16332 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2786.7612.1

>prot_H-paniculata_contig2786.7612.1 ID=prot_H-paniculata_contig2786.7612.1|Name=mRNA_H-paniculata_contig2786.7612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=653bp
MSRSDPYAVAHIEKADQKGKVTYTELGRTETIGNTSNPEFAHQFIVDFFF
NEVQHIKVEIFDHDTVTADDSLGVAVFTLGSLMASPGRSLITRLNKSSGA
KAKGSMTIRAEEVASVADWCRLTMRGIKLPNKDGLFGKSDPYFTIARVRE
DNEWQQVHKSEVIMNDLNPLWKPQYFSVQAICNGDYLRPLRVEVYDWDQD
GSHDIIGIHTTNLRGLLKGQGHELALEVRKRLPRKSKGHLRVEHAEIEKR
ATLLEFLAGGLQINMMVAIDFTGSNGDPSHPQSLHYITPGGRLNEYQQAI
LSIGTILQDYDHDKMFPVYGFGGRVGTREVSHCFPICRVSNAGASDEALG
VQGILSAYSAALHNVTLAGPTLFSEVLQTAMARASSAESSQVFQRYDVAL
ILTDGIINDMRETIDLLVGASNLPLSIVIVGVGGADFSDMNALDGDGQRL
KDSAGFTATRDIVQFVPFSKYPPEDRHGSRLAADTTAEIPGQLLAYFASK
GIVPNPPRPPVPYAPVSPVGAYVQPIASSGGYAVDSVGLHGQPNSTAGGH
GASSVGAYGHAYPSGGSGGVSPIGVYGQPNPYGGGHGGSSAGTYGHPHTP
GRGHGSSSAGAYGHPHVSGGRHGDSPAGGYGQPTAFGEGQGDRFDSPPPY
QP*
back to top

mRNA from alignment at H-paniculata_contig2786:2946..16355-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2786.7612.1 ID=mRNA_H-paniculata_contig2786.7612.1|Name=mRNA_H-paniculata_contig2786.7612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13410bp|location=Sequence derived from alignment at H-paniculata_contig2786:2946..16355- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGGTCTCAAAACATCGGACGTGATGTCCAGGTCGGATCCATATGCCGTA GCTCACATTGAGAAGGCTGATCAGAAGGGAAAAGTCACATACACGTGAGT GCCACGAAACTCAGCACAGACGTAATCATGATGCCCTTTTGGTGGCTATA TCGCCATCCCTTTTGCGATAGTTATTTCTCGTGCGTACCGTGTAATTATA TTACTAGCCAGCATGTCATCTTGCTCATATGAACACGCGTACAAAGAGCG ATTGAGTTTTCTCTCTTGTGAATGCAATGTCGGAAACCCTCACGAGTACA TGTTCAAGACAGGAAATGCGCAAGCAGTTAGAGCCGGGCAAAGTCTCCGT CTTCACAGACGGGACAAGTTGCAACGTAGTGGGGACTCATACTGTTTTAG TTGGGCACCGGTGCGCGATACATCTCAGTGGTATTGTTCCAGTAGACGCC AAAGCGCAATATTGGACGTGTGCTCTCGGTGACCATGTCCTTATCTTGTT TACAGTGGCAAGTGTTCTGTCAGCACACACTCTGAGGGAGTCGATATACA CGTACGTGCAGCCGACCGCGTTAACCGAAAAGTAGTATGTACAACCCGGA GAAGTTGAAACGCAACTACACATTTTTGCGTCCGTATTGTCCTTAAGTTT TTAGGCTCAAAGATGCGTGTCGTGCCCGTTATTACTCCAATTCGGTGTGC TCTTAAGCACCGAGTGCCATTGCTACTCGGCATGTTCAGCATTGTATTTC CAATAAATGAAGTTGACGTACACCCTTTCACAGGTATGAATTATCAAACT ATTCATATGAACACTAGGTTTTCGTACGTTTTGCACGCGACCTAGGCCCG AGCAGCCCACAATCACTCCCTGGGATTTTTAGGAAATTTTTCTAGTGGTC GTGTTTGATGGACAGGTCCAAGATATCACCCTTGGTCATGGCGCGTACGT GCGTTAGCAGAGCATGCCAACAACAGGGTCGACATATTGGGATGTCAGAG CACCCACTGTGCTGGTGTATTGTGCGTTTTGTTCGGTGTTTGACCACGAC CTTAATTGCGATAGGGAATTGGGTCGCACAGAGACCATCGGGAATACCAG CAATCCAGAATTCGCCCACCAATTCATCGTGGACTTCTTTTTTAACGAGG TGCAGCACATCAAGGTGTGTTTTTGTTTTTTGCTTCACGTGCTAGTTGTA ATGATTTGCGGACAAACGGTCAACAGTTTGCGCTTGTTAAGTGTTATACA TTGGGATGGCAGTTTATTTTGAAACATGGGCCTTGTCGGACGTAGTGATC GTGCTGTTCCAAAAAATGGTCTTGCAATTTTTTCACCAGTGAGATTCGAT GTCGAGCTAAGACATTTCTATAGTTACCAAAGTTTGTAACGTTACAAGCA ACGGTTCCAGGATTTGTCCTCGAGAGCAGCATTGAACTGCCCGAGATTGC ATTGCTTGGATAGAAACAGCGTAAATTTCAACATACACCATCGCTGTTTA CCCTGGAAAGGCAATAAAACAAACTTTGTGTCTCGCTATTCAAGCAATGA AAATCGATCACACGCATGCAATCTCATTCCTAAATCTTCACCTCAAAAAT AAATTATATATGTATGTGGTCCACACGTGCCCTCTTTTTGTTTGGTCAAA TCGAATTCTATTCAGCAGGTTCAGTACTTGAACAGCAACCCATGTACACA GGAGGGTAGGCTCTACTCTCCCTCGATATATGTCCTTCATTCTCTGGATA ATGAGACTGCATACCTCCAACTTTCGCGACTTAGGCTTTTGGGTGTTGAG CTGCCATTAGTTTCTCGTGTCTTTTCAGTACTTGGCTTCGGCTCAATGTT GTTTTCGCAAATTCATTGAAGGACATCGTAACCTGTACCATCGTTTTCGT TGAGCGATGCTTTTCGCGAATACTCGGTTCATCGTGATGTAACCGCTCAG CAATGCTCAATGCCCATCCATGCGCGAATGCTCTGCTGCAAGCTCTCGGT TGCTCAGAAGACTATTTCTAAGATTTGACAGCTACGTCTACTTCAGGCCG AATGTCTTGCGCTACTGTTCTGTATATGTGCCCGAGCACATCGTACTTTT AGGTCGATTTTATAACTATGCCATGTTGTACCGCGTATGCAAATACTTGC TCAAAACATACAAATGAGCGAATAGCTATGTGCCAGGCATCGTGCTAAAC GGGCTGCAAGTTTCATGCACGCCACCCGAACGGAGGTACAGCTTGCCTGG TGAGGTGAACTTGTAGGTTCACCCATTCTTGTCGCACCTATTTATTTCAC TGTTCTCTACGATATCCAGAAGTTAAAGGGTAAAGTTTGCGAGCTTCTTT CCCGCATCTGCCTCGTACGCGATAGAGGTCTCTGCCGTCTGAATTGGGGC GTGAAAACCAACATAAAGGAACTATTTTAGTATACGTATTGTGCAATTGA AATGATTCGATGTTGCTCACTCGAACGGCTTCTGTTGACTCGCATTATGT GTCTATTTCCCCGTAATTTTCAGCCCATTTGAACTAAGTTGATCCAATCC ATAAAGTGAAAGCTATCCTCGTTACACTGCTCAATAATTTTGCGTGTGAT TGATAGTTTTCTCTCAATAAAATGGATCAAGTTACTGACCACGGTGATAG CTTTGGTGGTCTGAACAGTTGCACTCACGGTTACTGAAGAATGCTTACAG TTTTGTAGACCAGGTAGCTCCCACAATTGCTGCCAACGAGTGCAATACTG CACAGCTCGGACGAAGGCCCTTCATCCGTCGATGAAGGATGTCGCGGGTT TTGGAACTATACCAGCACGAGGATACCTGGTGCCTTCCCAAACCCACAAA TCGATCGCATGGATGTCCTGCACAACTTCGAGGAGTGTTCGACTTTTGAG TACTAGCGCACCTCTATAGATATTTCTACTTTTGAGCATGAAGGGATAAC AGTTCCATTGTATGTTAATTACTTGAAAATCAAACCTTCGTCTGAGCTGT GCAATCTTGTCTTCCTCTCGAATAGCAGCTTTGTTCAACCCCACGTGCAT TGCAGGCAGCTCTGGATGCCTGGTATATGTGGTCAAATTAAGACTTGAGA ACATTAATGGGCGTGACTGTACCGTCTGTCCTTGGAAGTAAACAATAAGT CACCGTACATCAAGGTATGGTGGATCAATCTCAACGATACCTCCCGCCAC CTTCAGAGCCGAGCACTTACACTGTAGCGTTTCGCCTACTCCGTCTGACT TCATCTTGTCGTATCTCATCCTGACTCGTTTCGCGGTAATCGCTCCTCAC TCCAATCACACCCTCCGTTGGACTGCCTTCGCCTTGTGAGCTGTCGCCCA TTCAAACTTGACTCTCACATACGAGTCGCGTCATGCGAGACTCATAACGT ATTGCAATACTATGTCGAGTCGCTCACTTTTTCACTCCGATGAATTGTCG TTCTCCTTTCATTTCTCATTCTGCTGTATATCGAGTCCCGCGGCGCTTGG CCAGTCGCCGTGTCTCTCTTCTCGTGGTCCAGTTCTTCGGCAATCATTTC GCTGCATCCGTGTGCACGGCTTCGTGCAGTTTGGGTCCTCGCTTTGCCGG CTGGGCGGTTCCCTGTCGATGCGTCCGCGCTCACACTGGTCAATAACGCC TCGCGACGCGCCCCGTTGGACGACGTTCACGCGGTTCATTGTGACCTGTC GAGCGCATAAGCTTGACTCTCACGTATCAATCGCGTCATGTGAGGTTTAC AACCTATTGCATCATGAGCCTAGCCGGCCGTGGAGCTGGTGCTATCCTGG AGCTGTTATTAATGAGAATAGATGTCAAGCGAAGTACATGTAAAGTCATC AAAGTATGTAACATGAACAACGGTTCAAGGAATTATCTTCGAGAACCATT TCCAGTATATTTCCTCTACTATGAAAGCTAGTTGGTACATACTACGGCGG AGCAATATCCACTAGCCCGAGATTGCATTGCTTGAACTGTTCAAATTCCA GCATCTGTTTTACATCACTGTGCCATGCTAGACTGCTCAATTACCGGGCC TTCATTTGTGCTCGAAGTGTTTCGTTTTGCAATGGTTTGTCACTTGCGCT TGCTTAAATATTAGCTGTACGAACTTCCTCATCCTGTGGTTTACGTTGTG TTTTTTTCTCCTGAAACCACTGTAAATGAGGTGGGTATTTATCCACGCGG TTTACACTTTCTTTCACCATTTTCCCAAACCACTCCTCTTGAGTAATCAA TGTCTGCCTGCACCCACGAACCCAATACTCTTGAAGGTAGAGATTTTTGA CCATGACACAGTCACGGCCGACGATAGCTTGGGCGTTGCGGTGTTTACAC TAGGCAGCCTCATGGCATCACCAGGGAGGAGCTTGATTACGCGACTCAAC AAGTCGTCAGGAGCGAAAGCCAAGTAAGTTACACTGGTGATCCTCAATGA AGCGGCGATGTTCCTGCAGTACTTTCTTGCAGGCGCGTACGAGTGTCGAC AGCGAGTCGCTACCTTGATGTTAACAAGTCAGCCTATATGGCAAAAGCTC CAACAAGGTACGCTACCATAAGAGGCCGAAATAAAGTAGACGCGACGTGT CAATGTCCTACTATAATGGTCGGCCGAGTACACAAGTGAGCTTTTAACGC ACACGAACTAGACTTTGGCTAGTTACGTCGTTGTCGAACATTGATCCGGT ACGAGTCGGATCGCACGGATCTTGATCTCTACGTTCGAAAGGTAAGATCA TCAGATCGTTCACGGCTGGTACCCATCATTTGCACAGAAAAATTGTAGCG ATGTGGCGCCAACGTGCGGGTAAAACCCGATGCCTTGTAGTACCTGCACG ATCCGCCCAGGTTTGTCCACAAATCATCCGTTCGAGCTATACGATCGGTA TGTCTGTGTAACGGATGATCCATACAAGCCTGGTCGTTAGCGCATCGTTG CTGGCCATTGATCCTTACGAGCCAGATCGCACAGATCTTGATCCGTTCAA CCTGTTCAATTCTGGTCCGACACTAGCAGGATGACATCTAAGCCAACAAT ACACCGTTGCATTCGTTTGTTTGTTCTTTTCCAGGGGTTCGATGACCATT CGAGCAGAAGAGGTGGCGTCTGTCGCCGATTGGTGTCGGCTGACGATGCG AGGCATCAAGCTGCCCAATAAGGACGGGCTTTTTGGAAAGAGCGACCCTT ATTTCACTATCGCCCGCGTTCGGGAAGACAACGAATGGCAGCAGGTTCTG TGTGCATTCATGTATCATCTTCCACACTTCCCATCGATGTCTATACTATG CTCAGCGTGTGCGGTGTTTTGGGTATGCGTGTTTGGTGGAGCACATCAAT ACAATCTTCTTCCTGAACAAAGATATCGGCGGCAATCGGCAGTAATTCTG GCTCAAGTTTTAGCGGGGCATCGTGCTTGTACGAAGACCTCGACAGGCAA AATAGAAGTGTTGTTATTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTGC TGTTGCTGTTGCATACTTGACACGATTTCCCCTGAACCTCTAATCCATGA CGTCGCAGGTGCACAAGAGTGAGGTGATAATGAACGACCTCAATCCGCTG TGGAAGCCACAGTATTTTTCCGTACAGGTAAGCCTCATCCTTCACGTGAA CAGCGCATTTTGTCTCCCTAGACCACCCGCTTCAACAACGGGGGCATGCA GTACGAGAAAATGCCAACACGCGAATGTTATTACTCCACGATGCTTACGA GGTCCCTGCTTTTGCTATCAGCCAAGCATTTATAATCCATGTCTAAGTAG TTCTCGTTCCTGATCTCTTTACCAAGGCTTTGTTCGTGGAAACGAGAAGA AATGTATCCTAGAGTACACCCACACACACCAATGCTATTAATTTGTGTCT ATCAAATCATGCGGGTATTGTCAAAAACGCGAGATCTTTCCCATGATTGG CCTTTTCACTGTAGTTGTGCTCCCACACGGGTTACCATTGCTCACAAATG ACTTATTTGCCTATGGTGAACTGGGCGACGGTGTCATCACCATGCCTTGC TAAAATGCAAAGTCGAAACGTTTCTGACGCATAAATGATCCAGCATTTCG TGTTTATTTCCGATTTTACATGTTTGAACCGAACGTTTTTCCCCCAGGTA GGCTTCTGCATTGTGCAGGAATTGCGGGTTACCTTCGCAATATTGTATCC GGCTTGTTAGTCAACTGGGTGATTTTTTACGATTGTCATAATCATGTAAT TGCTCCAATCAGGCTCACGAGAGAGCAACATTGCCTCTCGTGATCTTTAA ACGTCTTTTTGACTCTCGTCGGTTATTCCTCTACGCAATTCCCCCTGAGG TTGAAAGTCAAGAGTAGTGCGCGCGCAGCTCGTTAGCATGCTAACTGCGA CACGTGCTATATCGCCCTTTTGATTTGGTTATATGGTTGTTTTCCAGACT GCCGTGCGTCACCGGGTGTGACAAAACCTTTTTTGCAGTTTTATCTTGAA ATTTTCAGAACAAGCTCCCGTTTTCCGGCCAGATATTCTTCACATCGTCA CATCTTTACTGTAGATACCGCGCCCATACCCGAAGCAATTCCTTCTGAGG GTCGACACGGAGACGAAAACCTTTGTTTCAAGTGTTGTTCCTATCTGCAT CCATTGGGAGGTTTCGTGCGCAACGAACTCACTGTCGCTATGTTCTATCT TGTGTCATGGTTCCGTCGCGTTTGTTCGCTCTGGTGTACTACTGTATTGG ATTACACTATTCCGTTAAACTGGTGCGATCTGACGGTCTTTTTTCAACGC ACCATGGTTTTCCGGCATGCAAGCCTTTTATGCCGTGCAGTCAGTTTCAT GTATGTTTCAATTCTGAGTGTGCATCATCAAGTGTTCCATCCCCCAAGGA GTGGTCTGGTTTGCTCTTTGAGTTCATTGTTTTCTTTTCGGAATGTCACA GTTCCGGGAAACTCGTCACCACAGGAGGTCTTGGGCAGACTTGACACACT CCGTGCAAATTCTCTGCGCAAACTACGCAATAATACTGTGTGCTTAGGCG CCTCAGGCGTTGCCCACCTTGACACCCGATATACACCATCCGGGTAGCCC CATGTTCCAGTTCTGCTGGAGTTGTTCAACAGTAAACCGTGCACCTTACA GGGCGCAGGAATAGCTCTTTGTTATACACAGACAACCGTGTTGTTTTGGC GCCTGTCTATGGCTATTGACATCTCACTCTGTAAAAACGAAAAATGCCCT TCGTCTCCTTGTTCTTCGTGGAATTATTTCAACCCTTCTTTTTCCCAGCG GAATCTGTACGACTCTGCTGACATTTCCCCAGCGCCAGGGTTGACCGGCG GCCCAACTGCAGCTGCTGCATAGTGATAAGCATTCCTCCACGATCTATAC TTTCCGCTGTGTCGTACGCGTAAATCGTTAGTGGCCATTGGCCTTGGCAC ATTGCTATCCTTGATCGTTGGAACGTCGGCCCCAGGAACCTTATATTGAC AAGCAGTTTACATAACACCTTAAACAGGCTATTTGCAACGGAGATTACTT ACGGCCGCTGCGCGTGGAAGTGTACGACTGGGACCAAGATGGTAGTCACG ACATAATAGGGATACACACCACCAATTTGCGGGGCTTGCTGAAGGGACAA GGCCATGAACTCGCTCTCGAGGTGCGTAAACGTTTAGTGGGATCACCGTA GCTTCGCATTTTAATGTACCTCATCGGATTGATGCCGCGTTGGCATTGAG AGTCAAGCGTTGCTTGTATAGAGAAAAATACGCCTAGTGGTAGCTTTTTC AGATGGAGCTGGCCTCGCTGAACCGGTCGCCGTGGCTGTCTATTATCAAG GTTTTACAGCTGCATAAACTCGCTGTTATGGCTTTGAATCACAATTCCAC GCTATAGCTATCCATGTTGTCGAAATGCTGCAGTGCGTCGCTGTTCTTTC ATCTGTCTTTATCTTCGGTTATTCACAAGAGACTGTCGCCCGGGCAGGTG TTTATGCTCTCACGTTGTGCCGTTTACTATTTTCCACCCCAGAGTGTACA CCCTCTGTATGCACCATTCGGAAGCGTTGTGAGGGAAGGAGCTTAAGCCC ACTATTGTGCAGTCTCGACTCTGTCGACAATGGGGAAGGCTATTAGACCC TTTCGTGGGGTGGGTCCCATGCATCGAAGTCTGAGCAATATTATACGCGC AGTGGATTGGGCAAGCACCAATGCTTCGAATGCATTTTGACTTTTGTCAA GTCAGGCGGTACTGCAGCATACCGTTCCACTCTCATTTCGTCGTTCGTAC CCCGAGGCCTGATTTGAGCATGGCGCCAATATGCACCACGCAGCTCTTTC GACTCGAGTTATATGTACAATTTGCACATTTATTACATTCGTGCCTTTTC TTAGGTTGTTCCTGATCTCGAATTAATGGAACATGACACATTTTGTGGCA TGCTGCCGCCTCGCTGCCATCGCTCATATCTGCAGAATCCCAAAAAGCCA AGGAAGAGTAAAGGTCATCTGAGGGTTGAGCACGCGGAGATCGAGAAGCG GGCGACTTTGCTCGAGTTCTTGGCTGGGGGTCTGCAGATCAACATGATGG TCGCCATCGACTTCACCGGAAGCAATGGAGACCCGTCGCACCCGCAAAGC CTGCACTACATTACTCCCGGAGGAAGACTGAACGAGTACCAGCAAGCCAT CCTGTCGATTGGAACAATCTTGCAAGATTATGATCACGATAAGATGTTCC CGGTATACGGGTTCGGCGGCAGGGTTGGGACCAGGGAGGTCAGCCACTGC TTCCCTATTTGCAGGTGCGCGCCCCCCCCCGGCACCCCCCCCCCCCCCCC CCCCCCCCCCGGCGTTGTATGTAATAGAAACGCAGCAAGTATTGTGCTAC GTGGTAGTTTCCTTGTTGCTAAGTACGGACTTGTCCCACAAGAGGCAATC ATTGTTTTGACGACGGCACAACACAGAAATTATGATACGGAAAATGCTAC ACCATCTAATTGCATTACGGTAACTTTACATAGCTCGGGAACATCCGATG TCAAAACACCGACACATCCATTACGTATCCACTCTGGGATCATTGGGTGT GGCAATGTAAACCTTGGCATTTTTTGCGCCAGTACCTCGTTGATACTACT GATATGCTTATGTGATAAAAAAACAACGAAGAAAAAACGTTTAACCGTTG GAGCGATCGACCCTGTCACCTTCACCGGTACAAAACGTTCAAAACACCTT TTTTTTGTGGTCTTTTTACAAATGGCAGGGTTTCCAATGCAGGTGCTTCG GACGAGGCTCTCGGGGTGCAGGGGATACTTTCGGCATATTCAGCAGCACT ACACAACGTGACTCTCGCGGGTCCCACCCTGTTTTCGGAAGTCCTTCAGA CGGCTATGGCTAGGGCAAGTTCGGCAGAGTCGAGCCAGGTCTTTCAGCGT TACGACGTCGCGCTCATCCTGACGGACGGGATCATCAACGACATGCGCGA GGTGAGCGTACTTTGTCTGTGATTCGTGGTTCAAGGACGTTTCGAGGTGG CGGCAAGGGTTGGTGCAGTTGACCGTCTCGTTTTTGTGAGCGCGCCTTTT ATTGAGAGGTCGCGACTCTACAGCTTGTAACGGTTAACTAGCGGTGCCGT TGCGGCTATGGGCAACCAGAAAGTATTAGGTCCCCGCCATGCGGCGAAAT GATTTGGATAAATGTATGCACAAGCTGTTCCAGATGGCCGTCAGTCACAC CATAGCAGTACATCGGACGCTCTTTTTTACGATATAATTCTTCTTCATGG GTCTTGAACTTATTCATATTCGACAAGAAAACATATTATTCCATCTCGGT CATTATTTTCTCGTGCATTCTTCGCCTCGCGTGACTGGGATATAGGTAAA CATGCCTATCAAGATACAATGTTTTGGTATCGTCCATAACTTCGCGAAAA ATTGATCATTTTCCACATTGGTTATCACGAGTTGCCCACAAGAGCAAGAC GCGTCGTTTGAACTGTTCAGCAAGGTACACTGTTCCGTCAGTGTCGAGAA AAGGCACCACACGCAAGCTGTATATCGTATTTTTTAGGTACAGGCAAAAA ATCGAAAATATAAGGATGCAGCACTCGCGAAATATGCTTCTGCGGCGGTA CGCAGCCGGTGCAGGAGGTACCGTAGTACTGCACACCCGCTTTGCTGTCT TGGTTTGGTCGATTCAGAAGCGCCTCAATGAAAGAGTGCGCATAGACAGC AAGGTCCTATATACCGCGGTAGTGGTTCTTGGTTACAGAATTGACCGAAC GTTGTACATGGCAAGACGAAAATACCTCAGGTCTTCAGAAACAAATGGCC AGAAGGCTATCGTAGTCGACTCCAATCCATCTCCAATTTTGCTTACCATC TCTTACAAGCATGAACTAAACACCCCAAAACATTCCGACCAAAAAAACAT GTTTTGGTAGAATATAGCGCGGTCAAGCACTGCCGTGGTTACCTAGAGAT TTTGACTGCAGAAGCGGCTAAAATTTCTTTACATGGCGAGGCGGAAATAT ATGAAAAGTAGACGATTATTCCAGAGAAAACCGACTGGAGTGCCATCGTA ATTGATTCTGATCCATCTCAAATTTTGCATGCCGTCTCCCAATAACATGC ACAACAGCCTTTAAAAATAAATTCTGATAAAACAAGGTATTTTGGTTGAG TATGGCGCGGTCAAACGCCGCCGGGGTACACCAATTGTTGTTCCAAAAAC GTTAATGCCAAATTACAGGATGTGGCGTGTCCCAGGTTGTGTGCAACTGA CTGCTTTGCATGGTAGATCTTAAGTGGTCAGGGGTCGTTTTGGTGTTTGG TCTTCCGTCACAAGATTCCGCTGGCTCTCCTGCCATGAGTTCTTATCCGT TTTGCGTTTTCAAAGTTTGGCTGAGAGCTGATAAAAAAATATATCCGTCA ATATCTCGTTAATTCTCCTAATCTCCGCCGTTCTTAGAAACCGTCAATTT GCGAGTAAGGTGCCTTGTGTGTATCTTGAACGGCATATTTACCTATACAC GTGTTTTCCTATCGTAAACGTCCGCAGACGATCGATCTTTTAGTAGGGGC ATCCAACTTGCCTCTCAGCATCGTCATCGTGGGCGTGGGGGGAGCGGACT TTTCGGTGAGTGCATACTTCGGTTGTCGATAATTATTGTCTCGAACTCTG TAATATCATGGGCTTTTACTACAATAGTTCTCGTCACATCAATATCTCTA GTCTGTCCAAAGGTCATGTTGTCGAAGACGGGTACTAGAACCACCTCGCC TGTGAACCAGACGACACGTTGGGCGACCACATTCGACACTACAGCACGGC AAATCCTCACGACGCAAGCAAATCAGGTGTCCAAGAAACACAGATATCCG GATTAGATAAAGTACTCAACTCCACGTCATACATCAGTGACAGAAGGGAT AGTGCCACGACGTGGCCATGCGAACCCTGAAAAAGCGATGATTCTGCCGA CACATGATGCGTAAGTCACATGCGACTATAGAAAGTTTCCTATAACCGTC CTGCTCTACACTACTCGATATCTAGTCGAATACCCCCATCTACATCCCAC AAAACCGTTACAGCTGGTAAAAGGACCTTGCATGAATATACAGCATCCTC AAATGATGTGATATGTGTGACCTCTCTTTCTGTGAAGCTTGTCACTAGTG GAAGTATATCCCGTACTCGCGTAGCACTGCCGCGGGGTACTCGATTTGTG ATGGACAACGCATTGCATGCAGAAAAGCTGTCGTAGGCTCGTTCCAGCAA ATTCACTGGTCGTACGTTAGTCTTACGTATATTGTCAGCAGAGAAGGTCA TTTTGATGTAGCAGCGGTTGTGTTCAATGGTAATCTCCCGGGATAACCAG CTACCAAAAGAGTACATTTGAGGTTAGTTTGTCCCAAGTTATGTGCAGAC TACGTTCGGCTATATTTACATGACGATTGCCGACCAGTTGTGGCGTATGC CCGACAATATGAACTAACCGTGTTTTACGATGTTAGAAACGCTTTGATGT ATCCTTATGGGATAACTAACTCAGGATATGAATGCGCTGGATGGCGACGG TCAAAGACTGAAAGACTCTGCAGGGTTTACCGCTACCAGGGATATCGTCC AGTTCGTACCATTCTCCAAGTACCCGCCGGTGAGAAGGAAGTCCAGCCTG AAAGCCGAGGCAGGGAGGAAGTGGTGGCACACTCGGTTTCACAGTTTAAT ACACGGACCTTTTGTGACTTTATCCGTGGGCGGTTGAAGCGTAATCCGGG ATGCAGGGTACATACACGCCGGCTCATTATGTTGCTTTGTAGAGCTACAA AGCCGTTGGATATTACCAACTTCGCTATGCCATTTATTGTTGCCGGTTTA TTATATTGAAGCATCGCAGTTGTTTTAGGCAGAAGTTGTGGTTGGACACA AAACAGGAACATACACAGGTCTCCACCTGAAATGCACGTACGTACGTACC ATACTCATGGACCATAATGATTTCGCATCATTAATTTGTGCAGACTGCAC ACAAAAATTGAGGTAATCTATTCCCCGTCGAAACTCCACCAGTCACCGAT ACCACACGTTCACAATTACGAGGCGGGCGACCCCTGCAACCATCCAATAT TTCATCTGATGAGGTTTCGCGAATATTCCCACATTATGTCGTGTTAGATA TCACGAACAACCCTGCCCTTCCTTGTTACGTTCACGAACGCAGGAAGACC GACATGGGTCGAGATTAGCCGCGGACACAACGGCGGAAATACCGGGTCAG CTGCTTGCATACTTCGCGTCGAAAGGGATTGTTCCCAACCCCCCTCGCCC CCCTGTGCCATACGCGCCTGTCAGTCCCGTGGGGGCGTACGTTCAACCTA TCGCCTCCAGCGGAGGATATGCTGTCGATTCCGTGGGGTTGCATGGCCAA CCAAACTCCACCGCCGGTGGACATGGAGCCAGTTCCGTGGGGGCGTACGG TCATGCTTACCCCTCCGGCGGGAGTGGTGGTGTTAGTCCCATAGGGGTGT ATGGCCAACCTAACCCCTATGGCGGCGGTCACGGTGGTAGTTCCGCGGGG ACATATGGGCACCCTCACACCCCCGGCCGGGGACACGGTAGCAGTTCCGC AGGGGCGTATGGGCATCCTCATGTCTCCGGCGGGAGACATGGTGACAGTC CCGCGGGGGGCTATGGCCAACCTACCGCCTTCGGCGAAGGGCAAGGTGAT AGATTCGATTCTCCGCCACCTTACCAGCCGTGATCGTTTTCTTGTTTTGT ACTTTTTTGGTCAGGTTTTGTTATGTCTTGGATTAGGCATGATTCTGTCG ATAACTAGTTTATGTAGTCATGTTTTTCGCTTTTCGTTGTTGTAAATAAG ATGTGGGGGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2786:2946..16355-

>mRNA_H-paniculata_contig2786.7612.1 ID=mRNA_H-paniculata_contig2786.7612.1|Name=mRNA_H-paniculata_contig2786.7612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3918bp|location=Sequence derived from alignment at H-paniculata_contig2786:2946..16355- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCAGGTCGGATCCATATGCCGTAGCTCACATTGAGAAGGCTGATCA
GAAGGGAAAAGTCACATACACATGTCCAGGTCGGATCCATATGCCGTAGC
TCACATTGAGAAGGCTGATCAGAAGGGAAAAGTCACATACACGGAATTGG
GTCGCACAGAGACCATCGGGAATACCAGCAATCCAGAATTCGCCCACCAA
TTCATCGTGGACTTCTTTTTTAACGAGGTGCAGCACATCAAGGGAATTGG
GTCGCACAGAGACCATCGGGAATACCAGCAATCCAGAATTCGCCCACCAA
TTCATCGTGGACTTCTTTTTTAACGAGGTGCAGCACATCAAGGTAGAGAT
TTTTGACCATGACACAGTCACGGCCGACGATAGCTTGGGCGTTGCGGTGT
TTACACTAGGCAGCCTCATGGCATCACCAGGGAGGAGCTTGATTACGCGA
CTCAACAAGTCGTCAGGAGCGAAAGCCAAGTAGAGATTTTTGACCATGAC
ACAGTCACGGCCGACGATAGCTTGGGCGTTGCGGTGTTTACACTAGGCAG
CCTCATGGCATCACCAGGGAGGAGCTTGATTACGCGACTCAACAAGTCGT
CAGGAGCGAAAGCCAAGGGTTCGATGACCATTCGAGCAGAAGAGGTGGCG
TCTGTCGCCGATTGGTGTCGGCTGACGATGCGAGGCATCAAGCTGCCCAA
TAAGGACGGGCTTTTTGGAAAGAGCGACCCTTATTTCACTATCGCCCGCG
TTCGGGAAGACAACGAATGGCAGCAGGGGTTCGATGACCATTCGAGCAGA
AGAGGTGGCGTCTGTCGCCGATTGGTGTCGGCTGACGATGCGAGGCATCA
AGCTGCCCAATAAGGACGGGCTTTTTGGAAAGAGCGACCCTTATTTCACT
ATCGCCCGCGTTCGGGAAGACAACGAATGGCAGCAGGTGCACAAGAGTGA
GGTGATAATGAACGACCTCAATCCGCTGTGGAAGCCACAGTATTTTTCCG
TACAGGTGCACAAGAGTGAGGTGATAATGAACGACCTCAATCCGCTGTGG
AAGCCACAGTATTTTTCCGTACAGGCTATTTGCAACGGAGATTACTTACG
GCCGCTGCGCGTGGAAGTGTACGACTGGGACCAAGATGGTAGTCACGACA
TAATAGGGATACACACCACCAATTTGCGGGGCTTGCTGAAGGGACAAGGC
CATGAACTCGCTCTCGAGGTGCGTAAACGTTTAGCTATTTGCAACGGAGA
TTACTTACGGCCGCTGCGCGTGGAAGTGTACGACTGGGACCAAGATGGTA
GTCACGACATAATAGGGATACACACCACCAATTTGCGGGGCTTGCTGAAG
GGACAAGGCCATGAACTCGCTCTCGAGGTGCGTAAACGTTTACCAAGGAA
GAGTAAAGGTCATCTGAGGGTTGAGCACGCGGAGATCGAGAAGCGGGCGA
CTTTGCTCGAGTTCTTGGCTGGGGGTCTGCAGATCAACATGATGGTCGCC
ATCGACTTCACCGGAAGCAATGGAGACCCGTCGCACCCGCAAAGCCTGCA
CTACATTACTCCCGGAGGAAGACTGAACGAGTACCAGCAAGCCATCCTGT
CGATTGGAACAATCTTGCAAGATTATGATCACGATAAGATGTTCCCGGTA
TACGGGTTCGGCGGCAGGGTTGGGACCAGGGAGGTCAGCCACTGCTTCCC
TATTTGCAGCCAAGGAAGAGTAAAGGTCATCTGAGGGTTGAGCACGCGGA
GATCGAGAAGCGGGCGACTTTGCTCGAGTTCTTGGCTGGGGGTCTGCAGA
TCAACATGATGGTCGCCATCGACTTCACCGGAAGCAATGGAGACCCGTCG
CACCCGCAAAGCCTGCACTACATTACTCCCGGAGGAAGACTGAACGAGTA
CCAGCAAGCCATCCTGTCGATTGGAACAATCTTGCAAGATTATGATCACG
ATAAGATGTTCCCGGTATACGGGTTCGGCGGCAGGGTTGGGACCAGGGAG
GTCAGCCACTGCTTCCCTATTTGCAGGGTTTCCAATGCAGGTGCTTCGGA
CGAGGCTCTCGGGGTGCAGGGGATACTTTCGGCATATTCAGCAGCACTAC
ACAACGTGACTCTCGCGGGTCCCACCCTGTTTTCGGAAGTCCTTCAGACG
GCTATGGCTAGGGCAAGTTCGGCAGAGTCGAGCCAGGTCTTTCAGCGTTA
CGACGTCGCGCTCATCCTGACGGACGGGATCATCAACGACATGCGCGAGG
GTTTCCAATGCAGGTGCTTCGGACGAGGCTCTCGGGGTGCAGGGGATACT
TTCGGCATATTCAGCAGCACTACACAACGTGACTCTCGCGGGTCCCACCC
TGTTTTCGGAAGTCCTTCAGACGGCTATGGCTAGGGCAAGTTCGGCAGAG
TCGAGCCAGGTCTTTCAGCGTTACGACGTCGCGCTCATCCTGACGGACGG
GATCATCAACGACATGCGCGAGACGATCGATCTTTTAGTAGGGGCATCCA
ACTTGCCTCTCAGCATCGTCATCGTGGGCGTGGGGGGAGCGGACTTTTCG
ACGATCGATCTTTTAGTAGGGGCATCCAACTTGCCTCTCAGCATCGTCAT
CGTGGGCGTGGGGGGAGCGGACTTTTCGGATATGAATGCGCTGGATGGCG
ACGGTCAAAGACTGAAAGACTCTGCAGGGTTTACCGCTACCAGGGATATC
GTCCAGTTCGTACCATTCTCCAAGTACCCGCCGGATATGAATGCGCTGGA
TGGCGACGGTCAAAGACTGAAAGACTCTGCAGGGTTTACCGCTACCAGGG
ATATCGTCCAGTTCGTACCATTCTCCAAGTACCCGCCGGAAGACCGACAT
GGGTCGAGATTAGCCGCGGACACAACGGCGGAAATACCGGGTCAGCTGCT
TGCATACTTCGCGTCGAAAGGGATTGTTCCCAACCCCCCTCGCCCCCCTG
TGCCATACGCGCCTGTCAGTCCCGTGGGGGCGTACGTTCAACCTATCGCC
TCCAGCGGAGGATATGCTGTCGATTCCGTGGGGTTGCATGGCCAACCAAA
CTCCACCGCCGGTGGACATGGAGCCAGTTCCGTGGGGGCGTACGGTCATG
CTTACCCCTCCGGCGGGAGTGGTGGTGTTAGTCCCATAGGGGTGTATGGC
CAACCTAACCCCTATGGCGGCGGTCACGGTGGTAGTTCCGCGGGGACATA
TGGGCACCCTCACACCCCCGGCCGGGGACACGGTAGCAGTTCCGCAGGGG
CGTATGGGCATCCTCATGTCTCCGGCGGGAGACATGGTGACAGTCCCGCG
GGGGGCTATGGCCAACCTACCGCCTTCGGCGAAGGGCAAGGTGATAGATT
CGATTCTCCGCCACCTTACCAGCCGTGAGAAGACCGACATGGGTCGAGAT
TAGCCGCGGACACAACGGCGGAAATACCGGGTCAGCTGCTTGCATACTTC
GCGTCGAAAGGGATTGTTCCCAACCCCCCTCGCCCCCCTGTGCCATACGC
GCCTGTCAGTCCCGTGGGGGCGTACGTTCAACCTATCGCCTCCAGCGGAG
GATATGCTGTCGATTCCGTGGGGTTGCATGGCCAACCAAACTCCACCGCC
GGTGGACATGGAGCCAGTTCCGTGGGGGCGTACGGTCATGCTTACCCCTC
CGGCGGGAGTGGTGGTGTTAGTCCCATAGGGGTGTATGGCCAACCTAACC
CCTATGGCGGCGGTCACGGTGGTAGTTCCGCGGGGACATATGGGCACCCT
CACACCCCCGGCCGGGGACACGGTAGCAGTTCCGCAGGGGCGTATGGGCA
TCCTCATGTCTCCGGCGGGAGACATGGTGACAGTCCCGCGGGGGGCTATG
GCCAACCTACCGCCTTCGGCGAAGGGCAAGGTGATAGATTCGATTCTCCG
CCACCTTACCAGCCGTGA
back to top