mRNA_H-paniculata_contig27838.7607.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Match: D7G7N0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N0_ECTSI) HSP 1 Score: 206 bits (524), Expect = 4.060e-63 Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 1
Query: 1 RQDTILQLLKANLPGITSSMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYSIPPDSRRRFESLAQAFFTEEFRACKDHMRHKTTMISPLQIQKAGIGYCTA 315
R DTILQLLKANLPGIT+ MLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWY IPP SR+RFESLAQAFFTEEFR CK HMRHKTTMISPLQIQKAGIGYCTA
Sbjct: 228 RLDTILQLLKANLPGITTPMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPGSRQRFESLAQAFFTEEFRTCKHHMRHKTTMISPLQIQKAGIGYCTA 332
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Match: W7TED2_9STRA (Lysine-specific demethylase 4c isoform 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TED2_9STRA) HSP 1 Score: 168 bits (425), Expect = 2.880e-45 Identity = 79/163 (48.47%), Postives = 108/163 (66.26%), Query Frame = 1
Query: 7 DTILQLLKANLPGITSSMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYSIPPDSRRRFESLAQAFFTEEFRACKDHMRHKTTMISPLQIQKAGIGYCTA---------------------------STNFAVDRWIEQGRGAGYCRCSPHSVRIDVDRF 414
D +++LL +NLPGIT++MLY GMWR+MFAFH ED+NLYSINYLH G PKSWYSIPP ++RRFESLAQ+ + FR C + +RHKT++ SP ++++GI + T +TNF+ +RW+ +GR A CRC P+SV I++D F
Sbjct: 150 DNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDF 312
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Match: A0A835Z284_9STRA (Lysine-specific demethylase 4A-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z284_9STRA) HSP 1 Score: 151 bits (382), Expect = 6.450e-44 Identity = 71/154 (46.10%), Postives = 96/154 (62.34%), Query Frame = 1
Query: 58 MLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYSIPPDSRRRFESLAQAFFTEEFRACKDHMRHKTTMISPLQIQKAGIGYCTA---------------------------STNFAVDRWIEQGRGAGYCRCSPHSVRIDVDRFEILVRQHR 438
MLY G WR++FA+HVED+NL SINY+HRG KSWYS+PP S FE LA+A F EF +C +++RHKTT++SP ++ +A + Y T S+NFA++RW+++GR AG+C+C PHSVRIDV L R R
Sbjct: 1 MLYVGTWRALFAWHVEDMNLCSINYIHRGAHKSWYSVPPSSADAFERLARAHFAGEFASCPEYLRHKTTLLSPAKLDEANVPYSTCLQSEGEIIITWPASYHCGFNHGFNIAESSNFAIERWLKEGRRAGFCKCRPHSVRIDVGTVAHLYRTSR 154
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Match: A0A6H5LNC5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNC5_9PHAE) HSP 1 Score: 154 bits (390), Expect = 1.690e-40 Identity = 85/163 (52.15%), Postives = 91/163 (55.83%), Query Frame = 1
Query: 1 RQDTILQLLKANLPGITSSMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYSIPPDSRRRFESLAQAFFTEEFRACKDHMRHKTTMISPLQIQKAGIGYCTASTNFAVDRWIEQGRGAGYCRCSPHSVRIDVDRFEILVRQHRRVAGPNASCLDGLAEAP 489
R DTILQLLKANLPGIT+ MLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWY IPP SR+R PHSVRIDVDRFE LVRQHRR+AG ++CL+GLAE P
Sbjct: 142 RLDTILQLLKANLPGITTPMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPGSRQR----------------------------------------------------------------PHSVRIDVDRFETLVRQHRRIAGKESTCLNGLAETP 240
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Match: A0A7S2K0D9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0D9_9STRA) HSP 1 Score: 148 bits (373), Expect = 5.630e-40 Identity = 74/160 (46.25%), Postives = 95/160 (59.38%), Query Frame = 1
Query: 37 LPGITSSMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYSIPPDSRRRFESLAQAFFTEEFRACKDHMRHKTTMISPLQIQKAGIGYCTA---------------------------STNFAVDRWIEQGRGAGYCRCSPHSVRIDVDRFEILVRQH 435
LPG+T+S +Y GMW ++FA H EDVNL SINYLH G PK WYSI PD +RFESLA + F + C + +RHK+ +ISP ++KAGI + T STNFAV WI G AG C C PHSVR DV RF++L++++
Sbjct: 16 LPGVTTSYIYVGMWGAVFAAHTEDVNLLSINYLHAGAPKYWYSIAPDDAQRFESLAVSLFPAQASNCPNFLRHKSHLISPTILKKAGIRFKTQVQRAGDAIITFPGSYHFGFNTGFNVAESTNFAVPEWIPYGLNAGVCMCHPHSVRFDVPRFQMLLQEY 175
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Match: A0A7S1BQH8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQH8_9STRA) HSP 1 Score: 151 bits (381), Expect = 2.350e-39 Identity = 75/160 (46.88%), Postives = 97/160 (60.62%), Query Frame = 1
Query: 37 LPGITSSMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYSIPPDSRRRFESLAQAFFTEEFRACKDHMRHKTTMISPLQIQKAGIGYCTA---------------------------STNFAVDRWIEQGRGAGYCRCSPHSVRIDVDRFEILVRQH 435
LPG+TS+ LY GMW S+FA H ED+NL SINYLH G PK WY+I P RFE+LA + F + CK+ +RHK +ISP ++QKAGI Y T STNFAV+ W+ G AG C+C PHSVRID+DRF++L+ ++
Sbjct: 473 LPGVTSAYLYFGMWGSIFAAHTEDMNLLSINYLHAGAPKYWYAISPTDADRFETLASSLFPAARQKCKEFLRHKRYLISPSRLQKAGIRYTTQVQRPGDAIITFPGSYHFGFNTGFNVAESTNFAVEEWMPLGNIAGVCQCHPHSVRIDMDRFKVLLARY 632
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Match: A0A7S4IA39_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IA39_9EUKA) HSP 1 Score: 142 bits (358), Expect = 5.620e-38 Identity = 71/164 (43.29%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 4 QDTILQLLKANLPGITSSMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYSIPPDSRRRFESLAQAFFTEEFRACKDHMRHKTTMISPLQIQKAGI--------------------------GY-CTASTNFAVDRWIEQGRGAGYCRCSPHSVRIDVDRF 414
+ IL+ L AN+ G+TS+ LY GMWRSMFA+H ED++L+SINY+H G PK WY IP RR FE LA F +F +C+ +RHKTTMI P ++KAGI GY C + NFA++ WI +G+ A C C S+ I++D F
Sbjct: 157 EQNILKYLAANIQGVTSTNLYFGMWRSMFAWHTEDMDLFSINYMHCGKPKYWYGIPERDRRAFEKLAAELFPRKFNSCRQFLRHKTTMIHPSILRKAGITVYSDIQREREFIITFPGAYHSGFNAGYNCAEAVNFALESWIPRGQMASVCYCKKDSIAINMDVF 320
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Match: A0A7S2N1K5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1K5_9STRA) HSP 1 Score: 146 bits (369), Expect = 7.350e-38 Identity = 79/180 (43.89%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 1 RQDTILQLLKAN------------LPGITSSMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYSIPPDSRRRFESLAQAFFTEEFRACKDHMRHKTTMISPLQIQKAGIGYCTA---------------------------STNFAVDRWIEQGRGAGYCRCSPHSVRIDVDRFEIL 423
R ++ LQLLKA+ LPG+T++ LY GMW S+FA H ED+NL SINYLH G PK WYSI P+ +RFESLA + F AC + +RHK ++SP ++KAGI + T STNFAV WI G A C C PHSVRID++RF++L
Sbjct: 327 RLESCLQLLKADVDDGSSNDDSLSLPGVTTAYLYVGMWASVFAAHTEDMNLLSINYLHAGAPKYWYSIDPEDSQRFESLAASHFGSAASACPEFLRHKRYLVSPTLLKKAGIQFRTLIQRAGDVVITFPGAYHFGFNTGFNMAESTNFAVPEWIPFGETARVCMCHPHSVRIDMNRFKVL 506
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Match: A0A024G8Z5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G8Z5_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.260e-37 Identity = 74/158 (46.84%), Postives = 92/158 (58.23%), Query Frame = 1
Query: 22 LLKANLPGITSSMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYSIPPDSRRRFESLAQAFFTEEFRACKDHMRHKTTMISPLQIQKAGI--------------------------GYCTA-STNFAVDRWIEQGRGAGYCRCSPHSVRIDVDRF 414
L + LPG+T SMLY GMWR+MFAFH ED++LYSINYLH G PK WY IPP + FE AQA + E++ +C +RHK +MISP Q++ GI G+ A + NFA RWI G A C+CSP SVRID+D F
Sbjct: 157 LCRIELPGVTRSMLYFGMWRAMFAFHTEDMDLYSINYLHHGKPKFWYCIPPHAASTFERAAQAIYPEKYHSCHQFLRHKNSMISPNQLKAFGIPVYKTLQSEGEFVITFPTAYHSGFNLGFNIAEAVNFATLRWIPFGLRARVCKCSPESVRIDMDDF 314
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Match: A0A2P6NGR7_9EUKA (Jumonji domain containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NGR7_9EUKA) HSP 1 Score: 145 bits (366), Expect = 2.870e-37 Identity = 74/173 (42.77%), Postives = 105/173 (60.69%), Query Frame = 1
Query: 10 TILQLLKA--NLPGITSSMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYSIPPDSRRRFESLAQAFFTEEFRACKDHMRHKTTMISPL-----------QIQKAG-----------IGY-----CTASTNFAVDRWIEQGRGAGYCRCSPHSVRIDVDRFEILVRQHRR 441
+IL +L A NLPGIT+ LY GMW++MFA+HVED+NL+SINYLH G+PKSWYS+ P+ R E LAQ+ F E++R C + +RHKT++ISP +Q+ G G+ C + NFA + WIE GR A +C C + +ID+D FE + + ++
Sbjct: 160 SILNVLGATQNLPGITTPYLYFGMWKAMFAWHVEDMNLFSINYLHFGEPKSWYSVAPEHGPRLERLAQSLFPEQYRGCPEFLRHKTSLISPSILAQNKIPVTKVVQEVGEFVITFPYSYHCGFNHGFNCAEAVNFATESWIEWGRKAKFCTCQSDTAQIDMDSFEAVYNEWKK 332 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27838.7607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27838.7607.1 >prot_H-paniculata_contig27838.7607.1 ID=prot_H-paniculata_contig27838.7607.1|Name=mRNA_H-paniculata_contig27838.7607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp RQDTILQLLKANLPGITSSMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPback to top mRNA from alignment at H-paniculata_contig27838:852..3082- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27838.7607.1 ID=mRNA_H-paniculata_contig27838.7607.1|Name=mRNA_H-paniculata_contig27838.7607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2231bp|location=Sequence derived from alignment at H-paniculata_contig27838:852..3082- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27838:852..3082- >mRNA_H-paniculata_contig27838.7607.1 ID=mRNA_H-paniculata_contig27838.7607.1|Name=mRNA_H-paniculata_contig27838.7607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at H-paniculata_contig27838:852..3082- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |