prot_H-paniculata_contig27712.7591.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27712.7591.1
Unique Nameprot_H-paniculata_contig27712.7591.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length381
Homology
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BLAST of mRNA_H-paniculata_contig27712.7591.1 vs. uniprot
Match: D7G8K5_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K5_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 1.000e-19
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0 
Query:  296 MAFLDAQIKTQRASEPCYAALLRSTTEAMRAKNPAWAKAQDKEKPSKSTITNARRGQLEGALQTRLEEENKKRSKSA 372
            +AFLDAQI+ +R +EPCYA+LLRSTT+AMR  NP WA AQDK KP++S IT ARR QL+GALQTRL EE KKR KS+
Sbjct: 1158 LAFLDAQIRKERRAEPCYASLLRSTTDAMRQNNPRWAAAQDKGKPARSAITGARRAQLKGALQTRLTEEEKKRGKSS 1234
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BLAST of mRNA_H-paniculata_contig27712.7591.1 vs. uniprot
Match: A0A6H5KL97_9PHAE (R3H domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL97_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.380e-19
Identity = 53/77 (68.83%), Postives = 64/77 (83.12%), Query Frame = 0 
Query:  296 MAFLDAQIKTQRASEPCYAALLRSTTEAMRAKNPAWAKAQDKEKPSKSTITNARRGQLEGALQTRLEEENKKRSKSA 372
            +AFLDAQI+ +R +EPCYA+LLRSTT+AMR  NP WA AQD+ KP++S IT ARR QL+GALQTRL EE KKR KS+
Sbjct:  454 LAFLDAQIRKERRAEPCYASLLRSTTDAMRQNNPRWAAAQDRGKPARSAITGARRAQLKGALQTRLTEEEKKRGKSS 530
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27712.7591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8K5_ECTSI1.000e-1970.13R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KL97_9PHAE1.380e-1968.83R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036867R3H domain superfamilyGENE3D3.30.1370.50coord: 3..59
e-value: 2.0E-11
score: 45.5
IPR036867R3H domain superfamilySUPERFAMILY82708R3H domaincoord: 10..53
IPR001374R3H domainPFAMPF01424R3Hcoord: 6..52
e-value: 6.2E-8
score: 32.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27712contigH-paniculata_contig27712:129..1271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27712.7591.1mRNA_H-paniculata_contig27712.7591.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27712 124..1568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27712.7591.1 ID=prot_H-paniculata_contig27712.7591.1|Name=mRNA_H-paniculata_contig27712.7591.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=381bp
MEVQGVASEGDTLALPAELTARQRALVHETAETLGLGHVSRGEGPLRRAI
LSRVVGVDAQRRNAEVDARQLPRIASIDRSDRSTCVETVVNFDLATATGF
MALGTEDEDSDATDSGVSGLPEEPTAAAVNKASNSCSSAPVQHEGSDSPP
DPNIRVECTSPAILSSATAAAASRDTAGRFLPTENALLKDLHAARAARRP
PPPPAQAKGRQKKGKSAASTAGDQGFAVELASANGGGRGGAKKKSASKRG
GSAKKGKNKGGGGWGGGEAFGNGGAKVNNTSASEVGGGGGDSDDEMAFLD
AQIKTQRASEPCYAALLRSTTEAMRAKNPAWAKAQDKEKPSKSTITNARR
GQLEGALQTRLEEENKKRSKSAGNTEKNSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036867R3H_dom_sf
IPR001374R3H_dom