mRNA_H-paniculata_contig11185.759.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Match: D8LDR6_ECTSI (1,3-beta-glucan-binding protein, family GH16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR6_ECTSI) HSP 1 Score: 278 bits (712), Expect = 1.970e-90 Identity = 125/163 (76.69%), Postives = 144/163 (88.34%), Query Frame = 1 Query: 13 QGDGCEMGICGFGNGEAQWYRKENVGVMDGKLIMTSKSESYAGNIYTSAKMSTDSMVVIKYGRIETRVKLPRAQGLWPSIWLLPQDSPYGSWASGGAINILQARNFMDRVHGQLTFGGEYPDVDNLDLYEGGHCYSDLYDDFSENYHVFAIEWEEEVFRYLVS 501 +GDGCEM ICGFGNGEAQWYRKENV + DGKL +T+K+E+YAGNIYTSAK+STD+MV I YGRIE RVKLP+AQGLWPSIW+LPQDSPYG WASGGAINIL+ARN M RVHGQL FGG YPDV+ LDL EGGHCYSDL+DD SE+YHV+A+EWE + FR+ + Sbjct: 178 EGDGCEMDICGFGNGEAQWYRKENVVIRDGKLSITAKAETYAGNIYTSAKLSTDTMVSITYGRIEIRVKLPKAQGLWPSIWMLPQDSPYGGWASGGAINILEARNEMSRVHGQLAFGGAYPDVEKLDLSEGGHCYSDLHDDLSEDYHVYALEWETDSFRWYLD 340
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Match: A0A6H5L3A1_9PHAE (GH16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A1_9PHAE) HSP 1 Score: 273 bits (699), Expect = 2.260e-84 Identity = 122/163 (74.85%), Postives = 143/163 (87.73%), Query Frame = 1 Query: 13 QGDGCEMGICGFGNGEAQWYRKENVGVMDGKLIMTSKSESYAGNIYTSAKMSTDSMVVIKYGRIETRVKLPRAQGLWPSIWLLPQDSPYGSWASGGAINILQARNFMDRVHGQLTFGGEYPDVDNLDLYEGGHCYSDLYDDFSENYHVFAIEWEEEVFRYLVS 501 +GDGCEM ICGFGNGEAQWYR+ENV V DGKL +T+K+E+YAGNI+TSAK+STD++V I YGRIE RVKLP+AQGLWPSIW+LPQDSPYG WASGGAINIL+ARN M R HGQL FGG YPDV+ LDL EGGHCYSDL+DD SE+YHV+A+EWE + FR+ + Sbjct: 173 EGDGCEMDICGFGNGEAQWYRRENVLVRDGKLSITAKAETYAGNIFTSAKLSTDTLVSITYGRIEARVKLPKAQGLWPSIWMLPQDSPYGGWASGGAINILEARNEMSRAHGQLAFGGAYPDVEKLDLSEGGHCYSDLHDDLSEDYHVYALEWETDSFRWYLD 335
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Match: A0A5Q4DEU8_9BACT (Glycoside hydrolase family 16 protein n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A5Q4DEU8_9BACT) HSP 1 Score: 150 bits (380), Expect = 5.630e-42 Identity = 72/163 (44.17%), Postives = 105/163 (64.42%), Query Frame = 1 Query: 16 GDGCEMGICGFGNGEAQWYRKENVGVMDGKLIMTSKSESYAGNIYTSAKMSTDSMVVIKYGRIETRVKLPRAQGLWPSIWLLPQDSPYGSWASGGAINILQ-ARNFMDRVHGQLTFGGEYPDVDNLDLYEGGHCYSDLYDDFSENYHVFAIEWEEEVFRYLVS 501 GDGC++G+CG+GN E QWYR+ENV V G L +T+++E G YTSA++ T YGRI+ R +LP +GLWP+IW+LP ++ YG+WA+ G I+I++ + DRVHG L +GGE+PD ++Y G F++ +H F +EWEE R+ V Sbjct: 69 GDGCDIGLCGWGNNELQWYREENVQVSGGVLTITARAEPAGGRAYTSARIRTLGKGDWTYGRIDVRARLPLGRGLWPAIWMLPSENRYGTWAASGEIDIVELVGHEPDRVHGTLHYGGEWPD----NVYSGAPFVLPS-GTFADRFHTFTLEWEEGEMRWYVD 226
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Match: D8LDR5_ECTSI (Endo-1,3-beta-glucanase, family GH16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR5_ECTSI) HSP 1 Score: 149 bits (377), Expect = 3.630e-41 Identity = 64/167 (38.32%), Postives = 103/167 (61.68%), Query Frame = 1 Query: 7 IPQGDGCEMGICGFGNGEAQWYRKENVGVMDGKLIMTSKSESYAGNIYTSAKMSTDSMVVIKYGRIETRVKLPRA-QGLWPSIWLLPQDSPYGSWASGGAINILQARNFMDRVHGQLTFGGEYPDVDNLDLYEGGHCYSDLYDDFSENYHVFAIEWEEEVFRYLVSE 504 + +GDGC++ +C +GNGE Q+Y EN V +G L +T+K E ++ YTS+K++T + +YGR E R++LP QGLWP+ W++PQD+ YG WA+ G I+I ++RN L +G +P+ N G C+ D+ D E YHV+A+EW+ + + + + Sbjct: 55 VDEGDGCDVDLCDWGNGEKQYYLSENAAVANGVLAITAKKEDFSSRFYTSSKVTTKNKFSFRYGRAEARLRLPPGGQGLWPAFWMMPQDNAYGKWAASGEIDIFESRNNFTESVNNLAYGNAFPNNSN----HNGECFLDVPDGTLEEYHVYAVEWDADEMVWFMDD 217
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Match: A0A4P7JIE3_9GAMM (Glycosyl hydrolase family protein n=2 Tax=unclassified Thalassotalea TaxID=2614972 RepID=A0A4P7JIE3_9GAMM) HSP 1 Score: 150 bits (379), Expect = 6.200e-39 Identity = 70/170 (41.18%), Postives = 106/170 (62.35%), Query Frame = 1 Query: 7 IPQGDGCEMGICGFGNGEAQWYRKENVGVMDGKLIMTSKSESYAGNIYTSAKMSTDSMVVIKYGRIETRVKLPRAQGLWPSIWLLPQDSPYGSWASGGAINILQARNFMDR----VHGQLTFGGEYPDVDNLDLYEGGHCYSDLYDDFSENYHVFAIEWEEEVFRYLVSE 504 I GDG + GI G+GN E QWY+++N+ V DG L++T+K ++ G YTS +M +D V ++YGRIE R+K+P QG WP+ W+LP DS YG WASGG I+IL+ + + HG + FG +P L+++ + DD YHV+A+EWE++ R+ + + Sbjct: 151 IETGDGSQYGIVGWGNNELQWYQQDNITVSDGNLVITAKQQASNGYNYTSGRMRSDGKVDVQYGRIEARIKVPAGQGFWPAFWMLPTDSQYGGWASGGEIDILEVFSATEDNNNDAHGTVHFGMAWP----LNVFTNASAGQPVLDD----YHVYAVEWEQDEIRWYMDD 312
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Match: A0A6M8W1P8_9BACT (Glycoside hydrolase family 16 protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A6M8W1P8_9BACT) HSP 1 Score: 143 bits (360), Expect = 1.760e-38 Identity = 70/165 (42.42%), Postives = 104/165 (63.03%), Query Frame = 1 Query: 16 GDGCEMGI-CGFGNGEAQWY--RKENVGVMDGKLIMTSKSESYAGNIYTSAKMSTDSMVVIKYGRIETRVKLPRAQGLWPSIWLLPQDSPYGSWASGGAINILQARNFMDRVHGQLTFGGEYPDVDNLDLYEGGHCYSDLYDDFSENYHVFAIEWEEEVFRYLVS 501 GDG G+ G+GN E Q+Y R EN V +GKL +T++ E+YAG YTSA++ + + +YGR E R+++PR QGLWP+ W+LP DSPYG WA+GG I+I++ N HG + GG++P+ + G+ +S+ D S YH +A+EWE + R+ V Sbjct: 50 GDGTAYGLPSGWGNNELQYYTDRPENARVQNGKLTITAREENYAGKRYTSARLRSRGLADFRYGRFEARIRVPRGQGLWPAFWMLPTDSPYGGWAAGGEIDIMETVNVPLESHGTIHHGGQWPNNRS-----NGNSFSNGLD-LSLQYHTYAMEWEPDQLRWYVD 208
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Match: A0A3M1XRI2_9BACT (Glycoside hydrolase family 16 protein (Fragment) n=2 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M1XRI2_9BACT) HSP 1 Score: 142 bits (359), Expect = 1.990e-38 Identity = 68/163 (41.72%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 16 GDGCEMGICGFGNGEAQWYRKENVGVMDGKLIMTSKSESYAGNIYTSAKMSTDSMVVIKYGRIETRVKLPRAQGLWPSIWLLPQDSPYGSWASGGAINILQARNFM-DRVHGQLTFGGEYPDVDNLDLYEGGHCYSDLYDDFSENYHVFAIEWEEEVFRYLVS 501 GDGC++G+CG+GN E QWY+K NV V G L +T++ E +G+ YTSA++ T YGR E R +LPR +GLWP+IW+LP ++ YG WA+ G I+I++ ++++G L FGG P ++ Y+ FS+++HVFA+EWE R+ V Sbjct: 106 GDGCDIGLCGWGNNELQWYQKANVQVSGGFLKITARKEEVSGHPYTSARIRTAHKQDWTYGRFEVRARLPRGKGLWPAIWMLPTNNVYGGWAASGEIDIMEMLGHEPNKIYGSLHFGGPAPQNQHVT-----GSYTLPSGTFSDSFHVFALEWEASEIRWYVD 263
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Match: A0A7Y2G9I4_9BACT (Glycoside hydrolase family 16 protein n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A7Y2G9I4_9BACT) HSP 1 Score: 140 bits (352), Expect = 7.880e-38 Identity = 70/164 (42.68%), Postives = 98/164 (59.76%), Query Frame = 1 Query: 16 GDGCEMGICGFGNGEAQWYRKENVGVMDGKLIMTSKSESYAGNIYTSAKMSTDSMVVIKYGRIETRVKLPRAQGLWPSIWLLPQDSPYGSWASGGAINILQARNFMDR-VHGQLTFGGEYPDVDNLDLYEGGHCYSDLYDDFSENYHVFAIEWEEEVFRYLVSE 504 GDGC++G+CG+GN E Q Y N V DGKL++T++ ES G YTSA++ T + KYGR E R KLP QG WP+IWLLP D YG WA+ G I+I++A+ R V G L +G +P+ + G YS F++++H F +EW E + V + Sbjct: 63 GDGCDIGLCGWGNNELQSYTTTNASVEDGKLVITAERESVGGRDYTSARVRTANKGDWKYGRFEIRAKLPPGQGFWPAIWLLPTDGTYGGWAASGEIDIMEAQGQAPRTVLGTLHYGDTFPNNQS-----SGGAYSLPSGFFTDSFHTFVLEWSEGRMLWYVDD 221
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Match: A0A7C2TXZ7_9BACT (Glycosyl hydrolase family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2TXZ7_9BACT) HSP 1 Score: 140 bits (354), Expect = 3.410e-37 Identity = 70/163 (42.94%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 16 GDGCEMGICGFGNGEAQWYRKENVGVMDGKLIMTSKSESYAGNIYTSAKMSTDSMVVIKYGRIETRVKLPRAQGLWPSIWLLPQDSPYGSWASGGAINILQ-ARNFMDRVHGQLTFGGEYPDVDNLDLYEGGHCYSDLYDDFSENYHVFAIEWEEEVFRYLVS 501 GDG GI G+GN E QWYR+EN +G LI+T+K ES+AG YTS +M T + KYGR+E R KLP +GLWP+ W+LP D+ YG WA+ G I+I++ + + +G L +GG++P+ + G Y+ FS+++HVFA+EW+ R+ V Sbjct: 65 GDGTAYGIPGWGNNELQWYRQENAVTENGFLIITAKKESFAGYAYTSTRMRTRNKGDWKYGRLEMRAKLPFGKGLWPAFWMLPTDNVYGGWAASGEIDIMELVGHEAHKTYGTLHYGGQWPNNTS-----SGTFYTLPAGKFSDDFHVFALEWKAGEMRWYVD 222
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Match: UPI001AD739ED (family 16 glycosylhydrolase n=1 Tax=Psychrosphaera ytuae TaxID=2820710 RepID=UPI001AD739ED) HSP 1 Score: 145 bits (366), Expect = 3.490e-37 Identity = 74/170 (43.53%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 7 IPQGDGCEMGICGFGNGEAQWYRKENVGVMDGKLIMTSKSESYAGNIYTSAKMSTDSMVVIKYGRIETRVKLPRAQGLWPSIWLLPQDSPYGSWASGGAINILQARN----FMDRVHGQLTFGGEYPDVDNLDLYEGGHCYSDLYDDFSENYHVFAIEWEEEVFRYLVSE 504 I GDG + G+ G+GN E +WY+ EN+ V DG L +T+K E+ G YTS +M +D V IKYGRIE R+K P QGLW + W+LP DS YG WASGG ++I++ + VHG + +G +P L+ GG + DD YHV+AIEWE++ R+ V + Sbjct: 153 IETGDGSQYGLTGWGNNELEWYQAENITVADGYLNITAKEEASNGYNYTSGRMRSDGKVDIKYGRIEARIKAPAGQGLWSAFWMLPTDSQYGGWASGGELDIMEIVSPNGTNNQEVHGTIHYGMAWP----LNKSAGGKYAINPTDD----YHVYAIEWEQDEIRWYVDD 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11185.759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11185.759.1 >prot_H-paniculata_contig11185.759.1 ID=prot_H-paniculata_contig11185.759.1|Name=mRNA_H-paniculata_contig11185.759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp MYIPQGDGCEMGICGFGNGEAQWYRKENVGVMDGKLIMTSKSESYAGNIYback to top mRNA from alignment at H-paniculata_contig11185:3813..8280- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11185.759.1 ID=mRNA_H-paniculata_contig11185.759.1|Name=mRNA_H-paniculata_contig11185.759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4468bp|location=Sequence derived from alignment at H-paniculata_contig11185:3813..8280- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11185:3813..8280- >mRNA_H-paniculata_contig11185.759.1 ID=mRNA_H-paniculata_contig11185.759.1|Name=mRNA_H-paniculata_contig11185.759.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1020bp|location=Sequence derived from alignment at H-paniculata_contig11185:3813..8280- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |