mRNA_H-paniculata_contig2767.7578.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Match: D7FWD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD4_ECTSI) HSP 1 Score: 409 bits (1051), Expect = 3.640e-139 Identity = 207/240 (86.25%), Postives = 221/240 (92.08%), Query Frame = 1
Query: 169 MSEGADGKDGAAENAVPGVPSTLEERCQGRRVIVVLKRASLEIVKTKKGEYELLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVSPQIRIPRTFKRFSGLMVQLLHKLKIRAHGNSTMLLKVVKTPVTLHLPPGCRTYGLSVEGTLYNPNHFAMQLPDDAPIVFFIGAMASGHITKDEHPEIEEMIAISDYPLSGAAAISRLFGGIENNWGIF 888
MSEG G AAE P VP+TL+ER QGRRVIV+LKRASLE VKTKKG+++LLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYI TTLNVLIEV+PQIRIPRTFKRFSGLMVQLLHKLKIRA GNSTMLLKVVK P T HLPPG +T+GLSVEGTLYNPNHFA LPDDAPIVF+IGAMASGH+TKDE+PEIEEMIAIS+YPLSGAAAISRLFGGIEN+WGIF
Sbjct: 1 MSEG--GAAAAAEEGPPSVPATLDERSQGRRVIVILKRASLETVKTKKGDFQLLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYILTTLNVLIEVNPQIRIPRTFKRFSGLMVQLLHKLKIRAAGNSTMLLKVVKNPPTRHLPPGSKTFGLSVEGTLYNPNHFAATLPDDAPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGIF 238
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Match: A0A836CMU2_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU2_9STRA) HSP 1 Score: 336 bits (862), Expect = 1.090e-110 Identity = 161/221 (72.85%), Postives = 190/221 (85.97%), Query Frame = 1
Query: 223 VPSTLEERCQGRRVIVVLKRASLEIVKTKKGEYELLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVSPQIRIPRTFKRFSGLMVQLLHKLKIRAHGNSTMLLKVVKTPVTLHLPPGCRTYGLSVEGTLYNPNHFAMQLPDDAPIVFFIGAMASGHITKDEHPEIEEMIAISDYPLSGAAAISRLFGGIENNWGI 885
+P TLEE+C+GRRV+VVL RASLE VKT++GE++LLNCDDH+ L+TKKSGKDP DLRPDIVHQELLALLDSPLNKAG+LQVY+ T VL+EVSPQ RIPRTFKRFSGLMVQLLHKLKIRA ++ LL+VVK PVT HLP G R YG+SV GTLYNP FA QLP+D PIV ++GAMA GH+T +HPE+EEMI++S+YPLSGAAAI+R+ G IE+ WGI
Sbjct: 9 LPKTLEEKCEGRRVVVVLWRASLETVKTRRGEFQLLNCDDHKSLITKKSGKDPADLRPDIVHQELLALLDSPLNKAGRLQVYVHTGKGVLVEVSPQTRIPRTFKRFSGLMVQLLHKLKIRAANSNATLLRVVKNPVTRHLPAGARIYGMSVVGTLYNPRLFAAQLPEDVPIVLYVGAMAQGHLTIADHPEVEEMISVSEYPLSGAAAIARVLGAIESEWGI 229
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Match: A0A6U0WJW5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WJW5_9STRA) HSP 1 Score: 306 bits (785), Expect = 4.100e-98 Identity = 155/222 (69.82%), Postives = 183/222 (82.43%), Query Frame = 1
Query: 229 STLEERCQG---RRVIVVLKRASLEIVKTKKGEYELLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVSPQIRIPRTFKRFSGLMVQLLHKLKIRAHGNSTMLLKVVKTPVTLHLPPGCRTYGLSVEGTLYNPNHFAMQLPDDAPIVFFIGAMASGHITKDEHPEIEEMIAISDYPLSGAAAISRLFGGIENNWGI 885
ST QG +RVIVVL +ASLE V+TKKG+Y+LLN DDHRR+ T+ + ++P+D RPDI+HQEL+ALLDSPLNKAGKLQVYI+TT NVLIEV+P+ RIPRTFKRFS LMVQLLHKLKIR+ MLL+V+K PVT HLP G YGLS G LYNP+HFA LPDDAPIVF IGAM++GHIT ++HP IEEMI+IS+YPLSGA AI+RL GGIEN+WGI
Sbjct: 74 STASAADQGGVPQRVIVVLDKASLETVRTKKGDYQLLNADDHRRIATQ-NDRNPRDYRPDILHQELMALLDSPLNKAGKLQVYIKTTANVLIEVNPKTRIPRTFKRFSALMVQLLHKLKIRSADGKDMLLRVIKNPVTRHLPAGAHIYGLSCTGELYNPHHFASALPDDAPIVFIIGAMSTGHITLNDHPYIEEMISISEYPLSGATAINRLVGGIENHWGI 294
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Match: A0A7S2WTR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTR9_9STRA) HSP 1 Score: 284 bits (727), Expect = 3.500e-90 Identity = 141/224 (62.95%), Postives = 173/224 (77.23%), Query Frame = 1
Query: 217 PGVPSTLEERCQG-RRVIVVLKRASLEIVKTKKGEYELLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVSPQIRIPRTFKRFSGLMVQLLHKLKIRAHGNSTMLLKVVKTPVTLHLPPGCRTYGLSVEGTLYNPNHFAMQLPDDAPIVFFIGAMASGHITKDEHPEIEEMIAISDYPLSGAAAISRLFGGIENNWGI 885
P V +E G R++IV+L ASLE KTK+G+YELLNCDDHR++ KK G DP + RPDI+HQELLAL+DSPLNKAG LQVYI T NVLIEV+P++R+PRTFKRFSGLMVQLLHK KIRA GNS ML+KV+K P + H+P GCR +G SV+GTLY P+ FA +PDD P + GAMASG I +HP IE+M +IS+YPLSGA A++R+ G IE+ WGI
Sbjct: 18 PAVERVVEAAGHGNRKIIVLLTLASLETTKTKRGDYELLNCDDHRQIA-KKYGLDPAEYRPDILHQELLALIDSPLNKAGLLQVYIHTRKNVLIEVNPKMRVPRTFKRFSGLMVQLLHKFKIRASGNSEMLMKVIKNPFSRHIPAGCRCFGFSVKGTLYKPSSFASLMPDDQPCLLVFGAMASGSIQVQDHPYIEDMASISEYPLSGACALNRICGAIESRWGI 240
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Match: A0A7S3Q0K3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0K3_9STRA) HSP 1 Score: 288 bits (736), Expect = 7.170e-90 Identity = 143/233 (61.37%), Postives = 178/233 (76.39%), Query Frame = 1
Query: 217 PGVPSTLEER----CQGRRVIVVLKRASLEIVKTKKGEYELLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVSPQIRIPRTFKRFSGLMVQLLHKLKIRAHGNSTMLLKVVKTPVTLHLPPGCRTYGLSVEGTLYNPNHFAM------QLPDDAPIVFFIGAMASGHITKDEHPEIEEMIAISDYPLSGAAAISRLFGGIENNWGI 885
P V ST ++R +++I++L +A LE VK +KG +ELLNCDDHR L KK +DPK+ RPDI HQELLAL+DSPLNK+G LQVY +T NVL+EV+P IRIPRT+KRFSGLMVQLLHK+KI+A ST L+KV+K P + HLPPG R YG+S +GTLY+PN A Q D P+VF IGAMA+GHIT ++HP IE+MI++S+YPLSGAAAISR+ GGIEN WGI
Sbjct: 125 PSVQSTDQQRKSSQASKQKIIILLDQARLETVKNRKGLFELLNCDDHRDLCKKKLKRDPKEFRPDIAHQELLALIDSPLNKSGSLQVYFRTNKNVLVEVNPSIRIPRTYKRFSGLMVQLLHKMKIKAGNTSTTLMKVIKGPFSQHLPPGARVYGMSCQGTLYSPNGLATALIPDEQTSDSPPVVFVIGAMAAGHITVEDHPYIEKMISVSEYPLSGAAAISRILGGIENQWGI 357
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Match: A0A6S8XKM1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XKM1_9STRA) HSP 1 Score: 285 bits (730), Expect = 7.260e-90 Identity = 141/216 (65.28%), Postives = 169/216 (78.24%), Query Frame = 1
Query: 256 RRVIVVLKRASLEIVKTKKGEYELLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVSPQIRIPRTFKRFSGLMVQLLHKLKIRAHGNSTMLLKVVKTPVTLHLPPGCRTYGLSVEGTLYNPNHFAMQL------PDDAPIVFFIGAMASGHITKDEHPEIEEMIAISDYPLSGAAAISRLFGGIENNWGI 885
+++IV+L A LE VK ++ YELLNCDDHR L T+K KDPK RPDI HQELLAL+DSPLNKAG LQVYI+TT NVL+E+ P IRIPRT+KRFSGLMVQLLHK+KI+A G+ST L+KV+K P + HLP G R YG+SV G LY+P A + DD P+ F IGAMA+GHITKD+HP IEEM ++S+YPLSGAAAISR+ GGIEN WGI
Sbjct: 78 KKIIVLLDLARLETVKNRRDTYELLNCDDHRDLCTRKLKKDPKQYRPDICHQELLALIDSPLNKAGCLQVYIKTTSNVLVEIHPSIRIPRTYKRFSGLMVQLLHKMKIKASGSSTTLMKVIKNPFSRHLPAGTRVYGMSVGGKLYSPMSLAQAVLSDDPEGDDPPVCFIIGAMAAGHITKDDHPYIEEMFSVSEYPLSGAAAISRILGGIENRWGI 293
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Match: A0A4D9DCH5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCH5_9STRA) HSP 1 Score: 283 bits (723), Expect = 8.710e-90 Identity = 143/226 (63.27%), Postives = 176/226 (77.88%), Query Frame = 1
Query: 211 AVPGVPSTLEERCQGRRVI-VVLKRASLEIVKTKKGEYELLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVSPQIRIPRTFKRFSGLMVQLLHKLKIRAHGNSTMLLKVVKTPVTLHLPPGCRTYGLSVEGTLYNPNHFAMQLPDDAPIVFFIGAMASGHITKDEHPEIEEMIAISDYPLSGAAAISRLFGGIENNWGI 885
A P + E + + VI VVL +ASLE VK K G+Y LLNCDDH+ ++ KKSGK+P D RPDI+HQELLALLDSPLNK GKL+VYI+++ NVLIEV+ + RIPRT+KRF+GLMVQLLHKLK+R+ LLKV+K PVT +LP G + YG SV+GTLYNPN A LPDD P+VF +GAMA+GHIT +HP IEEM+++SD+PLSGA AI+RL G IEN WGI
Sbjct: 2 AEPESSHDVTESLRNKEVITVVLDKASLETVKMKSGQYCLLNCDDHQAMM-KKSGKNPADYRPDILHQELLALLDSPLNKVGKLKVYIRSSSNVLIEVNAKCRIPRTYKRFAGLMVQLLHKLKVRSADGKATLLKVIKNPVTRYLPAGFKCYGFSVQGTLYNPNALACTLPDDKPVVFVLGAMAAGHITVQDHPYIEEMVSVSDFPLSGATAINRLLGAIENYWGI 226
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Match: A0A7R9W9I7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9I7_9STRA) HSP 1 Score: 278 bits (710), Expect = 2.890e-87 Identity = 144/253 (56.92%), Postives = 181/253 (71.54%), Query Frame = 1
Query: 163 RIMSEGADGKDGAAENAVPGVPSTLEER----CQGRRVIVVLKRASLEIVKTKKGEYELLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVSPQIRIPRTFKRFSGLMVQLLHKLKIRAHGNSTMLLKVVKTPVTLHLPPGCRTYGLSVEGTLYNPNHFAMQL--PDDA------PIVFFIGAMASGHITKDEHPEIEEMIAISDYPLSGAAAISRLFGGIENNWGI 885
R +E G P V S ER +++IV+L +A LE VK K+G +ELLNCDDHR L +K KDPKD RPDI HQE+LALLDSPLNKAG LQVYI+T NVLIE++P IRIPRT+KRFSGL+VQLLHK+KI+A G+S L+KV+K P + HLP G R +G+S +GTLY+PN A L PD + P+ F +GAMA+GH+T ++HP IE+M ++S+YPLSGAAAISR+ GGIEN WGI
Sbjct: 13 RARTETVRGPASTPLEIAPSVTSLDAERKSTESSKKQIIVLLDQARLETVKNKRGIFELLNCDDHRELCKRKLKKDPKDFRPDICHQEMLALLDSPLNKAGCLQVYIKTCKNVLIEINPSIRIPRTYKRFSGLIVQLLHKMKIKAGGSSETLMKVIKNPFSQHLPAGTRVFGMSCQGTLYSPNALAAALVPPDPSAASGAPPVCFIVGAMATGHVTVEDHPYIEKMFSVSEYPLSGAAAISRILGGIENYWGI 265
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Match: A0A6V1NKS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NKS5_HETAK) HSP 1 Score: 275 bits (704), Expect = 5.820e-87 Identity = 141/217 (64.98%), Postives = 164/217 (75.58%), Query Frame = 1
Query: 238 EERCQGRRVIVVLKRASLEIVKTKKGEYELLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVSPQIRIPRTFKRFSGLMVQLLHKLKIRAHGNSTMLLKVVKTPVTLHLPPGCRTYGLSVEGTLYNPNHFAMQLPDDAPIVFFIGAMASGHITKDEHPEIEEMIAISDYPLSGAAAISRLFGGIENNWGIF 888
E + R IV+L +A LE VKTK+G +ELLNCDDHR L K KDP LRPDI+HQELLALLDSPLNKAGKL+VYI TT NVLI+V+P IRIPRTFKRF+GLMVQLLHKLKIR+ S LL+V+K P T HLP C TY SV GTLYNPN FA QLP P F IGAMASGHI +++HP+ E +++S+YPLSGA AI+RL G +E GIF
Sbjct: 10 ESKSSERPYIVLLDKAVLETVKTKRGTFELLNCDDHRNLAGK-IKKDPATLRPDILHQELLALLDSPLNKAGKLKVYINTTKNVLIDVNPAIRIPRTFKRFAGLMVQLLHKLKIRSTNGSDTLLRVIKAPYTRHLPADCHTYVFSVTGTLYNPNQFAGQLPAGKPCCFVIGAMASGHIREEDHPQTVEKVSLSEYPLSGATAINRLMGALETQHGIF 225
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Match: A0A1E7FLB5_9STRA (Suppressor Mra1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLB5_9STRA) HSP 1 Score: 266 bits (680), Expect = 1.780e-83 Identity = 135/216 (62.50%), Postives = 166/216 (76.85%), Query Frame = 1
Query: 262 VIVVLKRASLEIVKTKKGEYELLNCDDHRRLVTKKSGKDPKDLRPDIVHQELLALLDSPLNKAGKLQVYIQTTLNVLIEVSPQIRIPRTFKRFSGLMVQLLHKLKIRAHGNSTMLLKVVKTPVTLHLPPGCRTYGLSVEGTLYNPNHFAMQL----PDDA----PIVFFIGAMASGHITKDEHPEIEEMIAISDYPLSGAAAISRLFGGIENNWGI 885
VIV+L +A+LE VK +KG YELLNCDDHR L KK KDP RPDI+HQELLALLDSPLNKAG L++YI TT VLIEV+P IR PRT+KRF+GLMVQLLHK+KI+A +ST LL+V+K P++ HLPPG R +G S EG LY+P A + PD P F +GAM+SGH+T D+HP IE+M++IS YPLSGAAA+SRL GGIE++WG+
Sbjct: 1 VIVLLDQATLETVKNRKGLYELLNCDDHRDLCKKKLRKDPNTFRPDILHQELLALLDSPLNKAGLLRIYISTTKKVLIEVNPTIRAPRTYKRFAGLMVQLLHKMKIKAGNDSTTLLQVIKNPLSSHLPPGTRCFGFSCEGQLYSPIALAKTVVSIEPDTTGKIPPTCFVVGAMSSGHVTIDDHPYIEKMLSISSYPLSGAAALSRLMGGIEHHWGV 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2767.7578.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2767.7578.1 >prot_H-paniculata_contig2767.7578.1 ID=prot_H-paniculata_contig2767.7578.1|Name=mRNA_H-paniculata_contig2767.7578.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bp MSEGADGKDGAAENAVPGVPSTLEERCQGRRVIVVLKRASLEIVKTKKGEback to top mRNA from alignment at H-paniculata_contig2767:451..9356- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2767.7578.1 ID=mRNA_H-paniculata_contig2767.7578.1|Name=mRNA_H-paniculata_contig2767.7578.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8906bp|location=Sequence derived from alignment at H-paniculata_contig2767:451..9356- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2767:451..9356- >mRNA_H-paniculata_contig2767.7578.1 ID=mRNA_H-paniculata_contig2767.7578.1|Name=mRNA_H-paniculata_contig2767.7578.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1446bp|location=Sequence derived from alignment at H-paniculata_contig2767:451..9356- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |