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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 530 |
| Cds size | 363 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2767.7579.1 >prot_H-paniculata_contig2767.7579.1 ID=prot_H-paniculata_contig2767.7579.1|Name=mRNA_H-paniculata_contig2767.7579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp
MACGEATATPEGETISTEAVHSVPEEGPSLPQICDNNHGKIRTKEPTCGR
RDMVTISTRIPCQLFHLAHSTPPQNCNIRLLPFPTVIPSRDMSTCRWTIP
TAGLLGIQTVHHSDKAPAISA back to topmRNA from alignment at H-paniculata_contig2767:9476..12568+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2767.7579.1 ID=mRNA_H-paniculata_contig2767.7579.1|Name=mRNA_H-paniculata_contig2767.7579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3093bp|location=Sequence derived from alignment at H-paniculata_contig2767:9476..12568+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTCGAACTCCAATCCAATCTTTACCACATGTCTTCGGAAGATTCCGCTG
CTCCAACGGTAGCCCGATGCCGAGTATTTGATCTTGGTCTAATGAATAGC
CTCATCCTATACAATAAGAGTGCGACATTTTCCCATCCCAGGCGTGGTGA
AACTCGGCGGGAGGAACATGGCTTGTGGGGAGGCGACCGCAACGCCTGAG
GGAGAGACCATAAGCACCGAGGCGGTGCATAGTGTCCCTGAAGAGGGACC
GTCATTACCTCAAATATGTGACAATAACCATGGTGAGATCGAGCGCCGTG
ATTGGAGTTGGTTTTTGATGTTCATCTGTTCATTGTTTCAAGGAAGGAAA
CGTCTTCTTCTCCTTCGAGCTTTGAATACCGCTGGTTTCATCGACACCCG
TCAGTGTGGTTGGGCGCTATCAGTGTGATTCTCGAGGGATTGAGATTGAA
GCTCTGAAACGAGCCTAGGCAACAACTTGTTGTGTTCAACTTCACCGCAC
CTTCTGTTTGATGCCACTACGCTTCACTCACCCAAGACTGATTTCATCTC
ACTGGGCAACCAGGGTATTTTAGTATGTTTAACCAGCGTGGTCGAGTATA
TTTCCTGGTCAGCCTTGGGCCATTGCAGCTTGCATTCCACCACCAACTCA
CGATACAAGCTCTCCGGGGGCATCAACTTCAGGACGACACAAAAATACAC
ACATCCCTCAGGACAGTATACCCAGCTGTTGGCATGGCCATCGTGTTGAT
TTGGTTTTGTTCGTCGTTGCTTTTATTATTATCATTTTTGTTGCGTTCCG
ACAATGTGCAGACTCGGACGCAGCTCCTGTGAAGGAAAGGCAATGCGCAA
ACAAGAAAAAAACGCCGAAAGTATATCCAGCAGACAGTACACCGTGAAGT
TCCTTCGAGTTTGTGTACAAAAAGAAGCACAAATGAACACATGAACGCAC
TTCAACTCACATCCTGCTGGTACGCTGTACGTTCTTTTGAATACTCAAAA
ACGGTACGTCACACACAGCTACAACAACAAATAGGTGAGCCCCACCACAC
ATATTTCTTTTATTTTTTCGGGCCCGAATAGACAATACTTGAAGATTAAC
TGGCAATTCTGATAATCCTGTTTATCACCCGTCAACCGAATGGGTGTTAC
TTTGATCTCTTTGAAAATTATTAGTTGATGAACGGTGGGCGATTAGCATC
GTTATTTCCCAAACGGAAGCTTACTGGCACTACCACTCATAGAGCTCTGT
ATTTTTTCAGAGAGAATATCATGTCGTACCCACGCACACGTGAGCACGGG
CTACGGGCTATCATGAGTACAAGTAGTATTTCCTGGAAGTAAGAGCGCCT
TCCCGGTTGACGCCACTAGGCCCCTTCGATGGGGAGATGCCGGACACCGA
ATAGATAATCATGGTCAAGAATCCGATTGCCGTGGATTGCCGTAGATTGC
CGGCGCCAACTACTTCGAGACATCATGAGAGGCGTCTCTCACCAGCAGCT
CTCCGAATTACACACAAAATACGGTAAGGGTTCTATGGGATAACATATTT
TACGTCAAGTGGACCTACACATGCCTCATCATCGCCACCACTACATAGCT
CATAATACAATCAGGATTGGTAAGGCACAGGGACCACCGCATACCTCTAG
ACAGCGAGCTCTTACTTCACCCTTTCTGTACGCGCCAAATTCGGATCAAT
ACATTCTCAGATGAGTTGTGAAGTAGACACAACCAGGCTACTGAGCTTCC
ATTTTAGGTTTAATGTTGTAACCTCCGCAGATTATTGTGGTCACTGCCCA
TTGAGGGGGAATCGCGCCGTGTCCTGAAGATGTATTTTCCCCCCTTGACA
AATGCTTTGTTATGCAGCAACGCAAATTAACGACATATACACAACGGCCG
TACTACGAGGGAGGCATCCGCGCTCTTTTCGGTCGGAGCGAGGAATTTAC
CAGTATTTGTGAGTAGAACGAGTTTAGCAGATAATTATACCGATTCCTGT
AGACGGCTAACGGCTAATCCTGTGCCTGCATCTATGCTAGCATCAATGGA
AGTCAGGTTGACGCTGAGCAATGAATACGTTTTCGCAGCCAGCCCTTGGC
TGAAAAACTATACTGCAATCGTGAACACCGTCTCTTCACACAGCAGCTAT
TGGCTTAGAGACATCTAGTGTTTCCACGCTGCCCTAGAAACACATGAAGA
ACAGTAAAGAGCAGTCAAGAATTTGGGACCTCACAATCAACACCTAACTC
ATCGCTCCGCTGAATACGGAGGATTTTTTCGAGTGCAAGATATGGTGATT
CCAACCTTACGACACGTCGGAAAGTCTTCACATGTTTGCTATTTTGGTGT
CGTTTTCGCACAGTCTTTAGTCGGCTTGTATAGTTCAATGCGCTCGGATT
GTTTCACCCAAACCTTGGCGACGCTACTATGTACGCGTGTGCTGGGTATC
ACATTTCCTGCATTTTCCTGTCCTTGTCCAAACACGAAAACAGGAAAGAT
TCGAACCAAAGAGCCAACATGCGGCAGAAGGGACATGGTTACCATTTCAA
CGCGGATTCCGTGTCAACTCTTTCATTTGGCACACTCCACTCCTCCTCAG
AATTGCAACATTCGTCTTCTTCCCTTCCCAACGGTAATCCCCAGCAGGGA
TATGTCAACATGTCGTTGGACCATTCCCACAGGTGGGTTGTTTACGATAC
GCGTCACTCCGAATACACCGTGTGGTGGTGTTGAACACGGGAATAGTCAT
CGTCACGGCTGAAAAAGGCTTCTGAGGCGTAATTTGCGCAGATTTACTTC
CCCGGGATTTACTCCCTCGGGCTGGAAACGATATTTTTTTGTCACCTGGA
AAGCTGTTTTTCGATGAAATACCATAACGCTGGACCCTTCGCAGGTGTGT
ATCCAACCTCCCGCAACATACCAAAAACCGAGACGAGCAAGGAATCAGCT
CTGACATCTTCCGACGGCCCAGCTTCTGCCATTTTGGTGCATATCAGATA
ACGGTTCTACATTCATTTTGTCGTTTGAACACAGCTGGACTGCTGGGGAT
ACAAACTGTCCATCACAGCGACAAGGCGCCAGCAATTTCCGCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig2767:9476..12568+ >mRNA_H-paniculata_contig2767.7579.1 ID=mRNA_H-paniculata_contig2767.7579.1|Name=mRNA_H-paniculata_contig2767.7579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig2767:9476..12568+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTTGTGGGGAGGCGACCGCAACGCCTGAGGGAGAGACCATAAGCAC
CGAGGCGGTGCATAGTGTCCCTGAAGAGGGACCGTCATTACCTCAAATAT
GTGACAATAACCATGATGGCTTGTGGGGAGGCGACCGCAACGCCTGAGGG
AGAGACCATAAGCACCGAGGCGGTGCATAGTGTCCCTGAAGAGGGACCGT
CATTACCTCAAATATGTGACAATAACCATGGAAAGATTCGAACCAAAGAG
CCAACATGCGGCAGAAGGGACATGGTTACCATTTCAACGCGGATTCCGTG
TCAACTCTTTCATTTGGCACACTCCACTCCTCCTCAGAATTGCAACATTC
GTCTTCTTCCCTTCCCAACGGTAATCCCCAGCAGGGATATGTCAACATGT
CGTTGGACCATTCCCACAGGAAAGATTCGAACCAAAGAGCCAACATGCGG
CAGAAGGGACATGGTTACCATTTCAACGCGGATTCCGTGTCAACTCTTTC
ATTTGGCACACTCCACTCCTCCTCAGAATTGCAACATTCGTCTTCTTCCC
TTCCCAACGGTAATCCCCAGCAGGGATATGTCAACATGTCGTTGGACCAT
TCCCACAGCTGGACTGCTGGGGATACAAACTGTCCATCACAGCGACAAGG
CGCCAGCAATTTCCGCCCTGGACTGCTGGGGATACAAACTGTCCATCACA
GCGACAAGGCGCCAGCAATTTCCGCC back to top
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