prot_H-paniculata_contig27643.7570.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27643.7570.1
Unique Nameprot_H-paniculata_contig27643.7570.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Match: A0A6H5L755_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L755_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 3.920e-33
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 0
Query:    3 QIDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADYIRLVNVHTEDILYDEKVL 68
            +IDLLLVTHFHLDHAASLPYLTEKTGFKGR+FCTHPTKAVMRMLL+DYIRLVNVHTE ILYDEK L
Sbjct:   52 EIDLLLVTHFHLDHAASLPYLTEKTGFKGRVFCTHPTKAVMRMLLSDYIRLVNVHTEHILYDEKDL 117          
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Match: A0A836CKW9_9STRA (Cleavage and polyadenylation specificity factor subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW9_9STRA)

HSP 1 Score: 116 bits (291), Expect = 8.040e-29
Identity = 57/66 (86.36%), Postives = 59/66 (89.39%), Query Frame = 0
Query:    3 QIDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADYIRLVNVHTEDILYDEKVL 68
             IDLLLVTHFHLDHAASLPY TE TGF GRIF THPTKAVMRMLLADYI+LVNV +EDILYDEK L
Sbjct:   52 DIDLLLVTHFHLDHAASLPYFTEHTGFSGRIFMTHPTKAVMRMLLADYIKLVNVSSEDILYDEKDL 117          
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Match: A0A6A5AC03_9STRA (Lactamase_B domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AC03_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.210e-25
Identity = 44/66 (66.67%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    3 QIDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADYIRLVNVHTEDILYDEKVL 68
            +IDLLL+THFH+DH A LP+ TEKTGFKGRIF THPTKAVM+M+L D++R+ N+  ED +YD+K L
Sbjct:   69 EIDLLLITHFHIDHVAGLPHFTEKTGFKGRIFMTHPTKAVMQMMLRDFLRVSNISVEDQIYDDKDL 134          
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Match: A0A2P4YGS2_9STRA (Cleavage and polyadenylation specificity factor subunit 3 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YGS2_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.220e-24
Identity = 41/66 (62.12%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    3 QIDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADYIRLVNVHTEDILYDEKVL 68
            +IDLLL+THFH+DH A+LP+ TEKT FKGR+F THPTKAVM+M+L D++R+ N+  +D +YD+K L
Sbjct:   68 EIDLLLITHFHIDHVAALPHFTEKTNFKGRVFMTHPTKAVMQMMLRDFLRVSNISVDDQIYDDKDL 133          
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Match: A0A397CGJ7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CGJ7_9STRA)

HSP 1 Score: 101 bits (251), Expect = 6.010e-24
Identity = 44/66 (66.67%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    3 QIDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADYIRLVNVHTEDILYDEKVL 68
            +IDLLL+THFH+DH A LP+ TEKTGFKGRIF THPTKAVM+M+L D++R+ N+  ED +YD+K L
Sbjct:   66 EIDLLLITHFHIDHVAGLPHFTEKTGFKGRIFMTHPTKAVMQMMLRDFLRVSNISVEDQIYDDKDL 131          
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Match: A0A1Z5JMM1_FISSO (Cleavage and polyadenylation specificity factor subunit 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMM1_FISSO)

HSP 1 Score: 101 bits (252), Expect = 1.520e-23
Identity = 49/69 (71.01%), Postives = 57/69 (82.61%), Query Frame = 0
Query:    3 QIDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADYIRLV---NVHTEDILYDEKVL 68
            QID+LLVTHFHLDHAASLPYLTE+T FKGRIF THPTK+V+R+LL DY+RL+   N   ED+LY E  L
Sbjct:   56 QIDVLLVTHFHLDHAASLPYLTERTNFKGRIFMTHPTKSVLRLLLGDYLRLLQMNNAKAEDVLYTEAEL 124          
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Match: W4GRG9_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=W4GRG9_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.080e-23
Identity = 44/66 (66.67%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    3 QIDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADYIRLVNVHTEDILYDEKVL 68
            +IDLLL+THFH+DH A LP+ TEKTGFKGRIF THPTKAVM+M+L D++R+ N+  ED +YD+K L
Sbjct:   69 EIDLLLITHFHIDHVAGLPHFTEKTGFKGRIFMTHPTKAVMQMMLRDFLRVSNISVEDQIYDDKDL 134          
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Match: A0A024TS72_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TS72_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.080e-23
Identity = 44/66 (66.67%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    3 QIDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADYIRLVNVHTEDILYDEKVL 68
            +IDLLL+THFH+DH A LP+ TEKTGFKGRIF THPTKAVM+M+L D++R+ N+  ED +YD+K L
Sbjct:   69 EIDLLLITHFHIDHVAGLPHFTEKTGFKGRIFMTHPTKAVMQMMLRDFLRVSNISVEDQIYDDKDL 134          
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Match: UPI001C4ECB67 (cleavage and polyadenylation specificity factor subunit 3-I-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4ECB67)

HSP 1 Score: 94.7 bits (234), Expect = 3.370e-23
Identity = 42/63 (66.67%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    4 IDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADYIRLVNVHTEDILYDEK 66
            ID+LLVTHFHLDHAASLPY  EKT FKGR+F TH TKA+ ++LL+DY+++  V  ED+LYDE+
Sbjct:   78 IDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQ 140          
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Match: A0A7S2Y2X5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y2X5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.880e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    3 QIDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADYIRLV---NVHTEDILYDE 65
            QID++L+THFHLDHAASLPYLTE+T FKGRIF THPTKAV+R+LL DY+RL+   N   ED+LY E
Sbjct:   57 QIDVVLITHFHLDHAASLPYLTERTNFKGRIFMTHPTKAVLRLLLGDYLRLLSMKNAKPEDVLYTE 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27643.7570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L755_9PHAE3.920e-3392.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CKW9_9STRA8.040e-2986.36Cleavage and polyadenylation specificity factor su... [more]
A0A6A5AC03_9STRA4.210e-2566.67Lactamase_B domain-containing protein (Fragment) n... [more]
A0A2P4YGS2_9STRA3.220e-2462.12Cleavage and polyadenylation specificity factor su... [more]
A0A397CGJ7_9STRA6.010e-2466.67Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A1Z5JMM1_FISSO1.520e-2371.01Cleavage and polyadenylation specificity factor su... [more]
W4GRG9_9STRA2.080e-2366.67Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]
A0A024TS72_9STRA2.080e-2366.67Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]
UPI001C4ECB673.370e-2366.67cleavage and polyadenylation specificity factor su... [more]
A0A7S2Y2X5_9STRA3.880e-2371.21Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 1..68
e-value: 8.7E-21
score: 76.1
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 3..66
IPR001279Metallo-beta-lactamasePFAMPF00753Lactamase_Bcoord: 3..34
e-value: 3.5E-7
score: 30.4
NoneNo IPR availablePANTHERPTHR11203:SF11CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 3coord: 3..66
NoneNo IPR availablePANTHERPTHR11203CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBERcoord: 3..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27643contigH-paniculata_contig27643:235..438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27643.7570.1mRNA_H-paniculata_contig27643.7570.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27643 235..438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27643.7570.1 ID=prot_H-paniculata_contig27643.7570.1|Name=mRNA_H-paniculata_contig27643.7570.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
ICQIDLLLVTHFHLDHAASLPYLTEKTGFKGRIFCTHPTKAVMRMLLADY
IRLVNVHTEDILYDEKVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro
IPR001279Metallo-B-lactamas