mRNA_H-paniculata_contig2763.7566.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2763.7566.1
Unique NamemRNA_H-paniculata_contig2763.7566.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Match: D8LPM3_ECTSI (Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM3_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 6.200e-151
Identity = 222/324 (68.52%), Postives = 257/324 (79.32%), Query Frame = 1
Query:    1 DLRGQHFVVTGANSGLGYITARELATMGAKVTMACRSESRGNAALDKIRQEALEKPVKEASVFLNCEGLEDVDVTVELPDLGSLHFVVNFAKHFKASNFTVDVLVNNAGIMAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTKDGGRVVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANVLDVKAFAKHLAPRGIITYAAHPGVVNTELMRNMTDNSLVSRLMWLFAPVYPYILASPLMGALTQIRCAIDSALGKPELSGKYWGNMIEEQCSELASDPANPPRYWKLTEDMLEAKLGKKMNDLI 972
            DLRG+HFVVTGAN+GLGY T RELA MGA VT+ACRS  RG  A+DK++ EALEKPVKE    L  EGL DVDV +E+ DLGSL  V+ FA+ FKAS   VDVL+NNAGIMAIPER+ETVDG EMQIGVNHFG HLLTRLMEP   DGGRV+FLSS+ H+QPPGQ   TLD+DNVN++K D Y  + A   YGRSKLAN+LD K FAK L  RGI TYA HPG+VNTELMRNMTD+SL+SR+  L AP+  +ILA+PL GALT IRCA+D +L  PE SGKYWGNM EE  SELA DPANPPR W++TE +LEAKLGK ++DL+
Sbjct:   17 DLRGKHFVVTGANTGLGYATTRELAKMGAAVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLL--EGLTDVDVRLEVLDLGSLQSVIAFAQRFKASGTKVDVLINNAGIMAIPERRETVDGLEMQIGVNHFGGHLLTRLMEPLMNDGGRVIFLSSLGHRQPPGQAKVTLDFDNVNYEKPDTYNSWMA---YGRSKLANILDAKEFAKRLEARGISTYACHPGIVNTELMRNMTDSSLMSRVTRLTAPLSRFILATPLTGALTTIRCAVDPSLAGPEFSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEAKLGKNVDDLL 335          
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Match: D8LP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP30_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 1.180e-129
Identity = 201/325 (61.85%), Postives = 239/325 (73.54%), Query Frame = 1
Query:    1 DLRGQHFVVTGANSGLGYITARELATMGAKVTMACRSESRGNAALDKIRQEALEKPVKEASVFLNCEGLEDVDVTVELPDLGSLHFVVNFAKHFKASNFTVDVLVNNAGIMAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTKDGGRVVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANVLDVKAFAKHLAPRGIITYAAHPGVVNTELMRNMTDNSLVSRLMWLFAPVYPYI-LASPLMGALTQIRCAIDSALGKPELSGKYWGNMIEEQCSELASDPANPPRYWKLTEDMLEAKLGKKMNDLI 972
            DLRG+HF+VTGAN+GLGY+TARELA MGAKVT+ACRS  RG  A+DK++ EALEKPVKE    L  +GL +VDV +E+ DLGSL  VV FA+ FKAS   VDVLVNNAGI  +P R+ET DG EMQIGVNHFG HLLTRLMEPS  DGGRV+FLSS+AH +PPG P TT DWDNVNFDK   Y    A   Y RSKLAN+ D K FAK LA R I TYA  PG+V TE+ R +    L+  ++        ++ L  PL GALT +RCA+D +L  PELSGKYWGNM EE  SELA DPANPPR W++TE +LE KLGK+++D++
Sbjct:  166 DLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLL--DGLTEVDVRLEVLDLGSLQSVVAFAQRFKASGTKVDVLVNNAGIFGVPNRRETADGLEMQIGVNHFGGHLLTRLMEPSMNDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSA---YCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLMMPIVNAGYVALGWVWLKGPLDGALTTVRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEEKLGKRVDDVV 485          
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Match: A0A6H5JP92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP92_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 1.960e-128
Identity = 196/325 (60.31%), Postives = 233/325 (71.69%), Query Frame = 1
Query:    1 DLRGQHFVVTGANSGLGYITARELATMGAKVTMACRSESRGNAALDKIRQEALEKPVKEASVFLNCEGLEDVDVTVELPDLGSLHFVVNFAKHFKASNFTVDVLVNNAGIMAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTKDGGRVVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANVLDVKAFAKHLAPRGIITYAAHPGVVNTELMRNMTDNSLVSRLMWLFAPVYPYI-LASPLMGALTQIRCAIDSALGKPELSGKYWGNMIEEQCSELASDPANPPRYWKLTEDMLEAKLGKKMNDLI 972
            DLRG+HF+VTGAN+GLGY+TARELA MGAKVT+ACRS  RG  A+DK++ E LEKP KE    L  +GL +VDV +E+ DLGSL  V+ FA+ FKAS   VDVLVNNAGI  +P R+ET DG EM IGVNHFG HLLTRLMEPS  DGGRV+FLSS+ H +PPG P TT DWDN+NFDK   Y    A   Y RSKLAN+ D K FAK LA R I TYA  PG+V TE+ R +    L+  ++        ++ L  PL GALT IRCA+D  L  PELSGKYWGNM EE  SELA DPANPPR W++TE +LE KLGK+++D+ 
Sbjct:   19 DLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKLKAEVLEKPAKEGVDLL--DGLTEVDVRLEVLDLGSLRSVIAFAQGFKASGTKVDVLVNNAGIFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPSINDGGRVLFLSSLTHSRPPGMPKTTWDWDNMNFDKPKTYDRLSA---YCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYAALGWVWLKGPLDGALTTIRCAVDPCLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEDKLGKRVDDVF 338          
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Match: D7FTL4_ECTSI (Similar to Retinol dehydrogenase 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL4_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 1.750e-82
Identity = 131/214 (61.21%), Postives = 155/214 (72.43%), Query Frame = 1
Query:  331 MAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTKDGGRVVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANVLDVKAFAKHLAPRGIITYAAHPGVVNTELMRNMTDNSLVSRLMWLFAPVYPYILASPLMGALTQIRCAIDSALGKPELSGKYWGNMIEEQCSELASDPANPPRYWKLTEDMLEAKLGKKMNDLI 972
            MAIP  + TVDG E QIGVNHFG HLLTRLME    DGGRVVFLSS+AHK          DWDNVN+ K + Y P  A   YGRSKLANVLD KAFA HL+ R I TYA HPGVVNT+L RN+TD  L+SR+  +   +  ++LASPL G+LT +RCAID AL  PE SGKYW +M + Q S LASDPANPPR W++TE++LE KLGKK+ +L+
Sbjct:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKH------GGWDWDNVNYTKPNKYVPMIA---YGRSKLANVLDAKAFAGHLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVAKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVQPSALASDPANPPRLWEITEELLETKLGKKIENLL 205          
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Match: A0A6H5JGN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN4_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 1.650e-58
Identity = 105/176 (59.66%), Postives = 122/176 (69.32%), Query Frame = 1
Query:  199 EGLEDVDVTVELPDLGSLHFVVNFAKHFKASNFTVDVLVNNAGIMAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTKDGGRVVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANVLDVKAFAKHLAPRGIITYAAHPGVVNTELMRNMTDNSLVSRL 726
            EGL DVDV VE+ DLG L  VV+FA+  K+S   +DVL++NAGIMAIP  K +VDG E QIGVNHF  HLL+RLM     DGGRVVF SS+AHK          DWDNVN+ K + + P  A   YGRSKLANVLD K FA HL+ R I TYA HPGVVNT+L RN TD  L+SR+
Sbjct:   34 EGLSDVDVQVEVLDLGVLQSVVSFAQRLKSSGQKIDVLIDNAGIMAIPTEKRSVDGLEKQIGVNHFVTHLLSRLMGKQIIDGGRVVFFSSVAHKH------GGCDWDNVNYTKPNEHGPMIA---YGRSKLANVLDAKGFAGHLSDRRINTYALHPGVVNTDLFRNATDGRLISRM 200          
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Match: A0A6J8C7G3_MYTCO (RDH12 n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8C7G3_MYTCO)

HSP 1 Score: 179 bits (454), Expect = 2.180e-50
Identity = 120/315 (38.10%), Postives = 171/315 (54.29%), Query Frame = 1
Query:    4 LRGQHFVVTGANSGLGYITARELATMGAKVTMACRSESRGNAALDKIRQEALEKPVKEASVFLNCEGLEDVDVTVELPDLGSLHFVVNFAKHFKASNFTVDVLVNNAGIMAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTKDGG--RVVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANVLDVKAFAKHLAPRGIITYAAHPGVVNTELMRNMTDNSLVSRLMW-LFAPVYPYILASPLMGALTQIRCAIDSALGKPELSGKYWGNMIEEQCSELASDPANPPRYWKLTEDMLE 939
            L G+H ++TGAN+G+G  TA +LA  GAKVT+ACR   R   A D I+Q                 G +++   V+  +L SL  V +FA+    +   +DVL+NNAGIM  P  K T DGFEMQ GVNH G  LLT L+    K     RVV +SS+AH++             +NFD  +    +    +Y +SKLANVL     AK L   G+ TY+ HPGV+NTEL R++T +     + W +   V  Y++ +P  GA T I CA+D +L   E +GKY+ +  ++  S+ A +  N  R WKL+  M++
Sbjct:   46 LDGKHVIITGANTGIGKETAIDLANRGAKVTLACRDMKRAQDAADDIKQ---------------ITGNQNI--IVKKLNLASLKSVRSFAEDINKNEKRIDVLINNAGIMRCPYWK-TDDGFEMQFGVNHLGHFLLTNLLLDKLKISAPSRVVTVSSLAHER-----------GKMNFDDLNQEKNYDKGSAYSQSKLANVLFSSELAKKLQGTGVTTYSLHPGVINTELSRHVTQS-----MGWRMLLSVIKYLIKTPNEGAQTTIYCAVDESLS--EETGKYYSDCAKKTPSKEALNDENAKRLWKLSAKMVD 324          
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Match: A0A433SZU2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SZU2_ELYCH)

HSP 1 Score: 176 bits (447), Expect = 2.580e-49
Identity = 117/312 (37.50%), Postives = 168/312 (53.85%), Query Frame = 1
Query:   22 VVTGANSGLGYITARELATMGAKVTMACRSESRGNAALDKIRQEALEKPVKEASVFLNCEGLEDVDVTVELPDLGSLHFVVNFAKHFKASNFTVDVLVNNAGIMAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTK--DGGRVVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANVLDVKAFAKHLAPRGIITYAAHPGVVNTELMRNMTDNSLVSRLMWLFAPVYPYILASPLMGALTQIRCAIDSALGKPELSGKYWGNMIEEQCSELASDPANPPRYWKLTEDMLEAKLG 951
            ++TGAN+GLG  TAR+LA  G ++ MACR+  +G A     R+E +E+   E             DV V+  DL S   + NFAK F  +   +D+L+NNAG+MA P+   T DG EMQIG NHFG  LLT L+    K     R+V LSS+AH         ++ WD++N DK   Y  + A   YG+SKLAN+L     +  L   G+   + HPG VNT+L R+ T+  +      L  P+      +P+ GA T + CA+   L   E+SGKY+ +  E+  S      A+  R W+LTE++++ KL 
Sbjct:   17 LITGANTGLGKETARDLAKRGGRIIMACRNLEKGEA----TRKEIVEETKNE-------------DVVVQELDLASFESIQNFAKKFNETETRLDILINNAGVMACPKTL-TKDGLEMQIGTNHFGHFLLTNLLLDKLKACSPSRIVILSSMAHA------FASIKWDDINSDKK--YGDWAA---YGQSKLANILHCLELSNRLKGTGVTVNSVHPGGVNTDLQRH-TNRGIFK----LLKPLSKLFFKTPVDGAQTTLYCALSPDL--EEVSGKYFVDCKEKAPSRRGQSEADAKRLWELTEEIIQQKLS 292          
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Match: UPI000359BC7D (retinol dehydrogenase 13 isoform X1 n=3 Tax=Aplysia californica TaxID=6500 RepID=UPI000359BC7D)

HSP 1 Score: 171 bits (434), Expect = 3.270e-47
Identity = 117/318 (36.79%), Postives = 171/318 (53.77%), Query Frame = 1
Query:    4 LRGQHFVVTGANSGLGYITARELATMGAKVTMACRSESRGNAALDKIRQEALEKPVKEASVFLNCEGLEDVDVTVELPDLGSLHFVVNFAKHFKASNFTVDVLVNNAGIMAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTKDGG--RVVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANVLDVKAFAKHLAPRGIITYAAHPGVVNTELMRNM--TDNSLVSRLMWLFAPVYPYILASPLMGALTQIRCAIDSALGKPELSGKYWGNMIEEQCSELASDPANPPRYWKLTEDMLEAK 945
            + G+  +VTGAN+G+G  TARELA  G ++ MACR        LDK      E  ++ A+  + C  L          DL S   +  FAK   ++   VD+L+NNAG+M  P+   T DG EMQ+GVNHFG  LLT+L+    K     R++FLSS+AH +  GQ         +NF+  +    + +R  YG+SKLANVL  +  AK L    +     HPGVVNTEL R++  T + + S   ++F P+   +L +PL GA T +R A+D +L K  ++GKY+ +  E++ +    D A   R W ++E     K
Sbjct:   59 IAGKTVIVTGANTGIGKETARELARRGGRIIMACRD-------LDKCEIARKEIVLETANKSVECRKL----------DLASFASIRAFAKLINSTESHVDILINNAGVMMCPKML-TEDGLEMQMGVNHFGHFLLTQLLLDKLKASAPSRIIFLSSLAHTR--GQ---------INFEDLNSAQEYNSRTVYGQSKLANVLCTQELAKILEGTNVTVNCLHPGVVNTELSRHLGFTQSKIGS---FVFFPIKFLLLKTPLQGAQTTLRLALDPSLEK--VTGKYFSDCREKEPAPQGQDAAAAKRLWAVSEAWTRVK 342          
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Match: A0A3B3RWA0_9TELE (Retinol dehydrogenase 12-like n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RWA0_9TELE)

HSP 1 Score: 169 bits (428), Expect = 7.720e-47
Identity = 112/313 (35.78%), Postives = 166/313 (53.04%), Query Frame = 1
Query:    4 LRGQHFVVTGANSGLGYITARELATMGAKVTMACRSESRGNAALDKIRQEALEKPVKEASVFLNCEGLEDVDVTVELPDLGSLHFVVNFAKHFKASNFTVDVLVNNAGIMAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTKDGG--RVVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANVLDVKAFAKHLAPRGIITYAAHPGVVNTELMRNMTDNSLVSRLMWLFAPVYPYILASPLMGALTQIRCAIDSALGKPELSGKYWGNMIEEQCSELASDPANPPRYWKLTEDML 936
            L G+  ++TGAN+G+G  TAR+LA  GA+V MACR   +G  A+D+I Q++  K                 D+ +   DL     +  FA+        VD+L+NNAGIM  P  K T+DGFEMQ GVNH G  LLT L+    K     R++ +SS+AH   P      +  D++N +K+     + ++ +YG+SKLAN+L  +  AK L   G+ TYA HPGVV +EL R+++  + +   M     + P+   S + GA T I CA+   L K   +G Y+ +     CS+ A D     + W+L+  ML
Sbjct:   18 LDGKTVIITGANTGIGKETARDLAKRGARVIMACRDVEKGEVAMDEIMQDSGSK-----------------DIVLSKLDLSDTKSIREFAELINKEEKQVDILINNAGIMMCPYSK-TIDGFEMQFGVNHLGHFLLTYLLIDLIKKSAPARIINVSSMAHTWGP------IRLDDINHEKS-----YDSKKAYGQSKLANILCTRLMAKKLEGTGVTTYALHPGVVQSELWRHLSAPAQLGVKM-----IKPFTKTS-VQGAQTSIYCAVAPELEKT--TGGYYSDCAPASCSQAARDDEMAQKLWELSCQML 293          
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Match: A0A7R9X9Q0_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9X9Q0_9CRUS)

HSP 1 Score: 171 bits (433), Expect = 7.870e-47
Identity = 119/316 (37.66%), Postives = 172/316 (54.43%), Query Frame = 1
Query:    4 LRGQHFVVTGANSGLGYITARELATMGAKVTMACRSESRGNAALDKIRQEALEKPVKEASVFLNCEGLEDVDVTVELPDLGSLHFVVNFAKHFKASNFTVDVLVNNAGIMAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTKDGG--RVVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANVLDVKAFAKHLAPRGIITYAAHPGVVNTELMRNMTD--NSLVSRLMWLFAPVYPYILASPLMGALTQIRCAIDSALGKPELSGKYWGNMIEEQCSELASDPANPPRYWKLTEDMLE 939
            L G+  +VTG N+G+G  T R+L   GAK+ MACR  ++   A  +IRQ   +                  ++ V   DL SL  V +F+         + +L+NNAGIM  PE + T DGFEM  GVNH G  LLT L+    K+    R+V +SS AH+   G+    +D+D++N  K+  Y P++A   Y +SKLAN+L  K  AK L   G+ TY  HPGVV+TEL R M++  N  + R++  F+ ++   L +P  GA T I CA+D AL     SGKY+ +  E + S  A D  +  R WKL+ +M++
Sbjct:   80 LDGKTVIVTGCNTGIGKETCRDLIKRGAKLIMACRDVTKAEKAAAEIRQTKTD------------------EIIVRHLDLTSLDSVRSFSSQILKEEPKIHILINNAGIMMHPEDR-TKDGFEMHFGVNHLGHFLLTLLLLDRLKESAPARIVTVSSAAHEG--GE----MDFDDINLSKS--YKPWKA---YSQSKLANILFSKELAKQLHGTGVTTYCLHPGVVDTELGRYMSESGNKTIVRILQFFSSLF---LDTPAKGAQTTIYCAVDEAL--ENTSGKYYLDCRETEPSSRARDEEDSKRLWKLSLEMVK 360          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2763.7566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM3_ECTSI6.200e-15168.52Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID... [more]
D8LP30_ECTSI1.180e-12961.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP92_9PHAE1.960e-12860.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTL4_ECTSI1.750e-8261.21Similar to Retinol dehydrogenase 12 n=1 Tax=Ectoca... [more]
A0A6H5JGN4_9PHAE1.650e-5859.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6J8C7G3_MYTCO2.180e-5038.10RDH12 n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8C7G3_... [more]
A0A433SZU2_ELYCH2.580e-4937.50Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
UPI000359BC7D3.270e-4736.79retinol dehydrogenase 13 isoform X1 n=3 Tax=Aplysi... [more]
A0A3B3RWA0_9TELE7.720e-4735.78Retinol dehydrogenase 12-like n=2 Tax=Paramormyrop... [more]
A0A7R9X9Q0_9CRUS7.870e-4737.66Hypothetical protein (Fragment) n=1 Tax=Argulus fo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2763contigH-paniculata_contig2763:11256..15139 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score439.9
Seed ortholog evalue1.1e-120
Seed eggNOG ortholog2880.D8LPM3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size981
Cds size981
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2763.7566.1prot_H-paniculata_contig2763.7566.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2763 11256..15139 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929836.193552-CDS-H-paniculata_contig2763:11255..114391622929836.193552-CDS-H-paniculata_contig2763:11255..11439Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2763 11256..11439 -
1691481032.3859148-CDS-H-paniculata_contig2763:11255..114391691481032.3859148-CDS-H-paniculata_contig2763:11255..11439Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2763 11256..11439 -
1622929836.2045636-CDS-H-paniculata_contig2763:12466..126931622929836.2045636-CDS-H-paniculata_contig2763:12466..12693Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2763 12467..12693 -
1691481032.3955762-CDS-H-paniculata_contig2763:12466..126931691481032.3955762-CDS-H-paniculata_contig2763:12466..12693Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2763 12467..12693 -
1622929836.2173676-CDS-H-paniculata_contig2763:13013..132831622929836.2173676-CDS-H-paniculata_contig2763:13013..13283Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2763 13014..13283 -
1691481032.4070537-CDS-H-paniculata_contig2763:13013..132831691481032.4070537-CDS-H-paniculata_contig2763:13013..13283Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2763 13014..13283 -
1622929836.2285516-CDS-H-paniculata_contig2763:14244..143451622929836.2285516-CDS-H-paniculata_contig2763:14244..14345Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2763 14245..14345 -
1691481032.4165761-CDS-H-paniculata_contig2763:14244..143451691481032.4165761-CDS-H-paniculata_contig2763:14244..14345Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2763 14245..14345 -
1622929836.2400954-CDS-H-paniculata_contig2763:14940..151391622929836.2400954-CDS-H-paniculata_contig2763:14940..15139Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2763 14941..15139 -
1691481032.4273002-CDS-H-paniculata_contig2763:14940..151391691481032.4273002-CDS-H-paniculata_contig2763:14940..15139Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2763 14941..15139 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2763.7566.1

>prot_H-paniculata_contig2763.7566.1 ID=prot_H-paniculata_contig2763.7566.1|Name=mRNA_H-paniculata_contig2763.7566.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp
DLRGQHFVVTGANSGLGYITARELATMGAKVTMACRSESRGNAALDKIRQ
EALEKPVKEASVFLNCEGLEDVDVTVELPDLGSLHFVVNFAKHFKASNFT
VDVLVNNAGIMAIPERKETVDGFEMQIGVNHFGPHLLTRLMEPSTKDGGR
VVFLSSIAHKQPPGQPMTTLDWDNVNFDKADPYTPFQARFSYGRSKLANV
LDVKAFAKHLAPRGIITYAAHPGVVNTELMRNMTDNSLVSRLMWLFAPVY
PYILASPLMGALTQIRCAIDSALGKPELSGKYWGNMIEEQCSELASDPAN
PPRYWKLTEDMLEAKLGKKMNDLITE*
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mRNA from alignment at H-paniculata_contig2763:11256..15139-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2763.7566.1 ID=mRNA_H-paniculata_contig2763.7566.1|Name=mRNA_H-paniculata_contig2763.7566.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3884bp|location=Sequence derived from alignment at H-paniculata_contig2763:11256..15139- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCTGAGGGGCCAGCACTTCGTCGTGACTGGAGCCAATTCTGGCCTCGG GTACATCACTGCCCGCGAGTTGGCGACGATGGGAGCCAAGGTCACCATGG CGTGCAGGAGCGAGAGCAGAGGCAACGCCGCCTTGGACAAGATTCGGCAA GAGGCGCTCGAGAAGCCGGTCAAGGAGGCGAGCGTCTTTTTGAATTGCGG TAATTGTTGAATGTTCCGTTTATCGTTTATCGTATACCTGAAACCCGTAC ACTGAGATTTCGAATACAAATACCCCCCCTCCCCTGAAGGGCAAAGTTTC CACGCATCAGACGATAGTTGCATCCATGAAGTCTTCCCATGGTCCAGGGC CCGAATAGCTTGGGTAGACTGTGCTAAACGATATTTGGGAGGGATGTTGG GGGATTTCAGTGGGCGCGAATCTCATTCCTGGTTCACTTCCCACACTTGC TATTCGTGTGACCGCATACGCATAGATAAGCGCCTATCTGCTATCATTAT AGTCAGGTCCCTCTCAGGTTGCACTTTTGGAGGATGGATATTGGGGGGGT GGAAATCGATAGAGAGGTTGCAGTTGAATCAGAATACGAGCGCCGTGGTG AGGCAGTCCGGTGTAAATATCGGTAGATGTACAGATTTTTTCTCTTGAAA TCGTGGGTATATATTAATCACCAATTACTCATAATCATCAAGTATAACAC CAGTAGTTCACACCCTCGCGTGCATCGAGCTGGATGACATCAGCCATTGC GCGACCTCGTACAATTTCGCGTTTGCACGGTGTTGCCCTGCTAGAGGGAC TGGAAGACGTCGACGTGACCGTCGAGCTTCCAGACCTGGGATCGCTACAC TTTGTGGTCAACTTCGCGAAGCATTTTAAAGCATCCAACTTCACGGTGAG TTGTATCCTAGCTGCGCAGCACGAGAGAGAGATCCTGGAAACACATTCGC ATCCCATGTTCTCATGGAGTTCAGAAGACGGCGTTTCCTCCACACGGTCC ACGTGTTGTGAATCTTTTGGTTAAATCTTTGGGGACTTCGTGAGTTTAGG CGTCGAACTGTTGTGTGCTGTATATAGAAATAGATCAATCACTTGAGTCG AACCAATGACCGATTTTGTCTGCTCTTGAACGTATTTTTACACATCTGTA GGTGTATTGACATCCATGCCGGCAACTTTTCAGCCTGAATATTCATAATG ACCGCAAATCGTTACAACCACCATGAGCGTTCTCGGAACATTCGACATAT ATTCCGGACGAATATACACTTGAAATTTTGAGGAGTTATTGGAATACGGA GCTGAACCGTTGTCCTGGAAGAACGGACGTGAAACTCATGAAAAGAAGAA AAGTTACAGCAAGCACTTCTGATGGTTTAAGAAGCTGTGTGGCGACCTGT AAACAAAGTCACGGTACAGACAGTTAGGCAGCAGTTGTGTGATATATTGA TATTGAACGGTGAAGAGTACGCTTCCGTTTGCTTCGATTCGAAATCGAAA TCAAACGTAATTTCGATGGGCAGATACTTTGACACACAATATTTTCTTCT AAGTTCCACGGTCCGGTCTCGTGTGATTCGAAAGGGGCTGCACGTCCCGT GTTTTTTTAACATAACCTACTCGATTTACTTGCTCGATCATTTTTGTTTG TGATTTCATATCAGACCCCGCACCCACGCGGCTGCTACTCTCCGTTTTGG AGCGATGTCAAAAACAAAAACCTTGCATCAAACATATAGTATTCTCATCA TTCCTCTTAATATAACAAACATGTTCAGTGGCGCAATTACTCAAGCGCAT CTATCACCCTGGTGGAATGTACAACTCGGTTTCATCAATAAACTAAAACG AATCAGGTAGATGTCCTCGTGAACAACGCGGGTATCATGGCCATTCCAGA GCGCAAGGAAACTGTCGACGGCTTCGAGATGCAGATCGGCGTGAACCACT TCGGACCGCACCTGCTGACCAGGCTCATGGAGCCCTCCACTAAGGACGGC GGACGAGTGGTCTTCCTGTCTTCGATTGCTCACAAACAACCCCCAGGCCA ACCCATGACCACCTTGGATTGGGACAACGTGAACTTCGACAAGGCGGATC CGTACACCCCGTTTCAGGCAAGATTTGTCTTCACTTGCTGCGTGCTTCGT AGGTGCTTTTCCGATGGTATGCAGGAGAGAGAGGGCAGGGAAATGACGAC CTGGTTAATCAAATAATCTCTCTTCATGTGGGGAGAACGGGAATTATTGA ACGCAAGTCTAGTGTTGCGAGGAGCACTGTAAACAAAAGCTGCCTATATA TAGCAATTTCGTATTCCGAACATGCCGACTGCACTGCACCATTTTCCCGA CTGAGGTAACGGTCTACGTTTGAATTTGGGGCATATGACTTACGTAGCCC CCATCTCGACCCAATTGCAACCTTTATCGTGAACCGTTTGCCCCAGTCCT ATGGGCGATCGAAGCTGGCGAACGTTTTGGATGTGAAAGCATTCGCGAAG CACTTGGCGCCCCGCGGAATCATCACTTACGCCGCACACCCTGGCGTCGT AAACACCGAGCTCATGCGGAACATGACGGACAACAGCCTTGTGTCACGCC TCATGTGGCTATTCGCCCCGGTGTATCCTTATATTCTCGCATCTCCGCTG ATGGGGGCGCTTACCCAAATCAGGTGAGTCATCATGCATCCGACGCGAGC GGGGAGGCAGGATAGGGGCTGTCGCGCATGGGGGGGGCGGTGTATTCAGC CCAACGTCAACCTGTCATCCCCGCCATTTCCACTGATAGTGGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCTATCTGTGCC AACGTAATTTGTCTTGTGCATCAGAGGTTGGTCTGGTTCGCGGTAGGTTC TGTCAGGTTTTGCCATATGAAGAGGCTTGGAAATAATAGCCTTCTTGAAG GTTGACTTTCGAAATGACGGCGTCCAATCCGCAACAGATATTTTCATTAC TGGAAGAGTAATTAGAAACTATTTTTCGAGAAAAAGTCGACAGCTTCGTC GTTCTGACTGACATCAGATTGCTCCTTCAATCATTACTACACTGCGCTTT TCACCCAACACCTCAGGTGTCGAGTTGGACTGGACTTCATCACTTGTTCT CTCTGTAATTCAATTGATCTGTGTATGTGTTCTTGTTTTTTTTGTGCATT TTTGCTGGCATAAATAACGTCTCCGCCACCACATAGATGCTCGCGGGAAG GTACCCTCCCCCACGAGACAAGTTTCCCCTTGTCACGCTACTAGTTTTAG AGCTGCGAAAAAGTATTCTCTGGCATGGATAAATATTCCGTGTTATGGTG GGATCGTTGAACAAGATATTCCTGAGCGAACAAGATATCACTTCCTGTGT AGAACTATTCTTTTCCAACGAACATAATTCAAGTAATCCCTTCAGTCTTT CGAACACATCTGTTGTCGTGAGATCGGACGAACCGATCTTTTGATGAATG GGAACGGAAAGATAATGATTATCTCGCGCGGTTGCTTCCTCCTCCTAGGA CACATTACAGAAAAGTTAGGTATTTTACCCCGATCCCTACGCCCCCTGCT TCGTACCTTTGAGTACTTCTAGAAAACGTACAACGGCAAGCGCATTCAAA GCATGATTACTTGACCCCCTCCACGCCCTTTCCCTTGGTGCGTGTACCAG GTGCGCGATTGACTCCGCTCTTGGCAAGCCTGAGCTGTCGGGCAAATACT GGGGCAACATGATAGAGGAGCAATGTTCCGAGCTCGCATCGGACCCGGCT AACCCGCCTCGGTACTGGAAGTTGACGGAAGATATGTTGGAGGCCAAGTT GGGCAAGAAAATGAACGACTTGATCACCGAGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig2763:11256..15139-

>mRNA_H-paniculata_contig2763.7566.1 ID=mRNA_H-paniculata_contig2763.7566.1|Name=mRNA_H-paniculata_contig2763.7566.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1962bp|location=Sequence derived from alignment at H-paniculata_contig2763:11256..15139- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCTGAGGGGCCAGCACTTCGTCGTGACTGGAGCCAATTCTGGCCTCGG
GTACATCACTGCCCGCGAGTTGGCGACGATGGGAGCCAAGGTCACCATGG
CGTGCAGGAGCGAGAGCAGAGGCAACGCCGCCTTGGACAAGATTCGGCAA
GAGGCGCTCGAGAAGCCGGTCAAGGAGGCGAGCGTCTTTTTGAATTGCGG
ACCTGAGGGGCCAGCACTTCGTCGTGACTGGAGCCAATTCTGGCCTCGGG
TACATCACTGCCCGCGAGTTGGCGACGATGGGAGCCAAGGTCACCATGGC
GTGCAGGAGCGAGAGCAGAGGCAACGCCGCCTTGGACAAGATTCGGCAAG
AGGCGCTCGAGAAGCCGGTCAAGGAGGCGAGCGTCTTTTTGAATTGCGAG
GGACTGGAAGACGTCGACGTGACCGTCGAGCTTCCAGACCTGGGATCGCT
ACACTTTGTGGTCAACTTCGCGAAGCATTTTAAAGCATCCAACTTCACGA
GGGACTGGAAGACGTCGACGTGACCGTCGAGCTTCCAGACCTGGGATCGC
TACACTTTGTGGTCAACTTCGCGAAGCATTTTAAAGCATCCAACTTCACG
GTAGATGTCCTCGTGAACAACGCGGGTATCATGGCCATTCCAGAGCGCAA
GGAAACTGTCGACGGCTTCGAGATGCAGATCGGCGTGAACCACTTCGGAC
CGCACCTGCTGACCAGGCTCATGGAGCCCTCCACTAAGGACGGCGGACGA
GTGGTCTTCCTGTCTTCGATTGCTCACAAACAACCCCCAGGCCAACCCAT
GACCACCTTGGATTGGGACAACGTGAACTTCGACAAGGCGGATCCGTACA
CCCCGTTTCAGGCAAGATTTGTAGATGTCCTCGTGAACAACGCGGGTATC
ATGGCCATTCCAGAGCGCAAGGAAACTGTCGACGGCTTCGAGATGCAGAT
CGGCGTGAACCACTTCGGACCGCACCTGCTGACCAGGCTCATGGAGCCCT
CCACTAAGGACGGCGGACGAGTGGTCTTCCTGTCTTCGATTGCTCACAAA
CAACCCCCAGGCCAACCCATGACCACCTTGGATTGGGACAACGTGAACTT
CGACAAGGCGGATCCGTACACCCCGTTTCAGGCAAGATTTTCCTATGGGC
GATCGAAGCTGGCGAACGTTTTGGATGTGAAAGCATTCGCGAAGCACTTG
GCGCCCCGCGGAATCATCACTTACGCCGCACACCCTGGCGTCGTAAACAC
CGAGCTCATGCGGAACATGACGGACAACAGCCTTGTGTCACGCCTCATGT
GGCTATTCGCCCCGGTGTATCCTTATATTCTCGCATCTCCGCTGATGGGG
GCGCTTACCCAAATCAGTCCTATGGGCGATCGAAGCTGGCGAACGTTTTG
GATGTGAAAGCATTCGCGAAGCACTTGGCGCCCCGCGGAATCATCACTTA
CGCCGCACACCCTGGCGTCGTAAACACCGAGCTCATGCGGAACATGACGG
ACAACAGCCTTGTGTCACGCCTCATGTGGCTATTCGCCCCGGTGTATCCT
TATATTCTCGCATCTCCGCTGATGGGGGCGCTTACCCAAATCAGGTGCGC
GATTGACTCCGCTCTTGGCAAGCCTGAGCTGTCGGGCAAATACTGGGGCA
ACATGATAGAGGAGCAATGTTCCGAGCTCGCATCGGACCCGGCTAACCCG
CCTCGGTACTGGAAGTTGACGGAAGATATGTTGGAGGCCAAGTTGGGCAA
GAAAATGAACGACTTGATCACCGAGTAAGTGCGCGATTGACTCCGCTCTT
GGCAAGCCTGAGCTGTCGGGCAAATACTGGGGCAACATGATAGAGGAGCA
ATGTTCCGAGCTCGCATCGGACCCGGCTAACCCGCCTCGGTACTGGAAGT
TGACGGAAGATATGTTGGAGGCCAAGTTGGGCAAGAAAATGAACGACTTG
ATCACCGAGTAA
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