mRNA_H-paniculata_contig27621.7564.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Match: D8LKQ5_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ5_ECTSI) HSP 1 Score: 233 bits (595), Expect = 5.680e-69 Identity = 118/144 (81.94%), Postives = 128/144 (88.89%), Query Frame = 1
Query: 1 QMTLEKFRKLSVAFMNVGLRDEKVVYGVIDMLVEKAQMEPHFSSMYAELCERIARTPISGLGEDPVGKDASKGSRKFRKMLLGKCQAEFEKDWPEIFLAIQNDSDLADDEKAEKEFLTKRKYTGHMRFVGELYKVELLKEKHVH 432
+MTLEKF KLSV FM+VGLRD KVV GVID++VEKAQMEPHFSSMYA+LC RIARTPI+GLGED GKDASKGS+KFRKMLL K Q EFEKDW +F A+Q+DS LADDEKAEKEF KRKYTGHMRFVGELYKVELLKEKHVH
Sbjct: 315 KMTLEKFDKLSVTFMDVGLRDPKVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQSDSTLADDEKAEKEFGLKRKYTGHMRFVGELYKVELLKEKHVH 458
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Match: A0A6H5L9P4_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9P4_9PHAE) HSP 1 Score: 230 bits (586), Expect = 7.490e-68 Identity = 116/143 (81.12%), Postives = 127/143 (88.81%), Query Frame = 1
Query: 4 MTLEKFRKLSVAFMNVGLRDEKVVYGVIDMLVEKAQMEPHFSSMYAELCERIARTPISGLGEDPVGKDASKGSRKFRKMLLGKCQAEFEKDWPEIFLAIQNDSDLADDEKAEKEFLTKRKYTGHMRFVGELYKVELLKEKHVH 432
MTLEKF KLSV FM+VGLRD +VV GVID++VEKAQMEPHFSSMYA+LC RIARTPI+GLGED GKDASKGS+KFRKMLL K Q EFEKDW +F A+Q+DS LA+DEKAEKEF KRKYTGHMRFVGELYKVELLKEKHVH
Sbjct: 286 MTLEKFDKLSVTFMDVGLRDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQSDSTLAEDEKAEKEFGLKRKYTGHMRFVGELYKVELLKEKHVH 428
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Match: A0A836CBQ1_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ1_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.100e-38 Identity = 78/145 (53.79%), Postives = 100/145 (68.97%), Query Frame = 1
Query: 1 QMTLEKFRKLSVAFMNVGLRDEKVVYGVIDMLVEKAQMEPHFSSMYAELCERIARTPISGLGEDPVGKDASKGSRKFRKMLLGKCQAEFEKDWPEIFLAIQNDSDLADDEKAEKEFLTKRKYTGHMRFVGELYKVELLKEKHVHV 435
+MTLEKF KLS F +VG ++V +I LVEKAQME HF+ MYA+LC R++ + P +DA G + FRKMLL CQ EF KD +I I++DS L +E+AE+E + KR+YTGHMRFVGELYKV LLKEK+VH+
Sbjct: 71 KMTLEKFDKLSAQFTDVGFTTVELVDRIISSLVEKAQMEAHFAPMYAKLCLRLSEAQL------PAFRDAKNGPKMFRKMLLEHCQEEFGKDTADIIQGIKSDSSLTPEEQAERELIVKRRYTGHMRFVGELYKVGLLKEKYVHL 209
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Match: A0A7S2BR93_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BR93_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.400e-33 Identity = 66/144 (45.83%), Postives = 100/144 (69.44%), Query Frame = 1
Query: 1 QMTLEKFRKLSVAFMNVGLRDEKVVYGVIDMLVEKAQMEPHFSSMYAELCERIARTPISGLGEDPVGKDASKGSRKFRKMLLGKCQAEFEKDWPEIFLAIQNDSDLADDEKAEKEFLTKRKYTGHMRFVGELYKVELLKEKHVH 432
++T+EKF +LS FMN+G + E+++ G+ID++V+KAQME HF +MYA+LC +++ PI LG++ GK +FR++LL +CQ EFE D I ++ L DDE+ EK L +++Y GHM+FVG+LY+VELL K +H
Sbjct: 376 KLTVEKFDRLSDEFMNLGFKTEELLTGIIDIIVDKAQMEQHFGAMYADLCVKLSANPIPELGDEEKGK-------RFRRLLLMRCQGEFELDQAAILAELEK---LGDDEREEKVLLARKRYLGHMKFVGQLYRVELLSVKIMH 509
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Match: A0A4D9D503_9STRA (MI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D503_9STRA) HSP 1 Score: 132 bits (331), Expect = 8.260e-33 Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 1
Query: 1 QMTLEKFRKLSVAFMNVGLRDEKVVYGVIDMLVEKAQMEPHFSSMYAELCERIARTPISGLGEDPVGKDASKGSRKFRKMLLGKCQAEFEKDWPEIFLAIQNDSD---LADDEKAEKEFLTKRKYTGHMRFVGELYKVELLKEKHVH 432
++++EKF KLS F+NVG + +++ ID++V KAQ E HFSSMYAELC R++RTP++GLGE GK FRK+LL +CQ EF +D + D L +E+ EK+ + K +Y GHMRF+GEL+ ELLKE+HVH
Sbjct: 315 KLSMEKFDKLSAEFVNVGFTSDALLWQAIDIIVAKAQEEVHFSSMYAELCLRLSRTPLAGLGETDKGK-------LFRKILLTRCQEEFNEDLNTRICKVDTDPSTAALGKEEREEKKRMAKFRYLGHMRFIGELFLKELLKEEHVH 454
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Match: A0A7S4VDN4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VDN4_9STRA) HSP 1 Score: 117 bits (294), Expect = 5.960e-28 Identity = 69/145 (47.59%), Postives = 99/145 (68.28%), Query Frame = 1
Query: 1 QMTLEKFRKLSVAFMNVGL-RDEKVVYGVIDMLVEKAQMEPHFSSMYAELCERIARTPISGLGEDPVGKDASKGSRKFRKMLLGKCQAEFEKDWPEIFLAIQNDSDLADDEKAEKEF---LTKRKYTGHMRFVGELYKVELLKEK 423
+++L KF KLS F+N G+ R+E+ + G I ++V KAQ EPHFS+MYA LC ++ARTP G+ E+P K +SK +KF+KMLL +CQ EFE+D +Q ++ DD++ EKE+ K+ Y GHMRF+GELYK +L+ K
Sbjct: 318 KLSLTKFDKLSDDFINTGIGRNEECLQGAISLIVGKAQDEPHFSAMYAALCLKLARTPFDGI-EEP-SKSSSKKGKKFKKMLLSRCQEEFEQD---TATKVQKATEGIDDDE-EKEYEANKVKKHYLGHMRFIGELYKGDLISIK 456
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Match: A0A7S4S9Z9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S9Z9_9STRA) HSP 1 Score: 117 bits (294), Expect = 7.890e-28 Identity = 69/145 (47.59%), Postives = 99/145 (68.28%), Query Frame = 1
Query: 1 QMTLEKFRKLSVAFMNVGL-RDEKVVYGVIDMLVEKAQMEPHFSSMYAELCERIARTPISGLGEDPVGKDASKGSRKFRKMLLGKCQAEFEKDWPEIFLAIQNDSDLADDEKAEKEF---LTKRKYTGHMRFVGELYKVELLKEK 423
+++L KF KLS F+N G+ R+E+ + G I ++V KAQ EPHFS+MYA LC ++ARTP G+ E+P K +SK +KF+KMLL +CQ EFE+D +Q ++ DD++ EKE+ K+ Y GHMRF+GELYK +L+ K
Sbjct: 318 KLSLTKFDKLSDDFINTGIGRNEECLQGAISLIVGKAQDEPHFSAMYAALCLKLARTPFDGI-EEP-SKSSSKKGKKFKKMLLSRCQEEFEQD---TATKVQKATEGIDDDE-EKEYEANKVKKHYLGHMRFIGELYKGDLISIK 456
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Match: A0A7S1ZM64_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZM64_TRICV) HSP 1 Score: 113 bits (282), Expect = 4.840e-27 Identity = 66/144 (45.83%), Postives = 99/144 (68.75%), Query Frame = 1
Query: 1 QMTLEKFRKLSVAFMN--VGLRDEKVVYGVIDMLVEKAQMEPHFSSMYAELCERIARTPISGLGEDPVGKDASKGSRKFRKMLLGKCQAEFEKDWP-EIFLAIQNDSDLADDEKAEKEFLTKRKYTGHMRFVGELYKVELLKEK 423
+++L KF KLS AF++ +GLR E ++G + ++V+KAQ EPHFS+MYA LC ++ARTP+ P+ + ++K +KF+KMLL +CQ EFE+D +I LAI+ D +E+ +K L K+ Y HMRF+GELYK +L+ K
Sbjct: 29 KLSLTKFDKLSDAFIDTGIGLR-ESTLHGAVGLIVKKAQDEPHFSAMYAGLCLKLARTPL------PLEEGSTKKGKKFKKMLLERCQEEFEQDTATKIQLAIEGVEDK--EEREQKAALVKKHYLSHMRFIGELYKGDLISIK 163
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Match: A0A225X0V3_9STRA (Eukaryotic translation initiation factor n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225X0V3_9STRA) HSP 1 Score: 112 bits (281), Expect = 4.440e-26 Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 1
Query: 1 QMTLEKFRKLSVAFMNVGLRDEKVVYGVIDMLVEKAQMEPHFSSMYAELCERIART--PISGLGEDPVGKDASKGSRKFRKMLLGKCQAEFEKDWPEIFLAIQNDSDLADDEKAEKEFLTKRKYTGHMRFVGELYKVELLKEKHVH 432
++++EKF KLS ++V +R +V+ GVI+M++ KAQME HFS+MYAELC +IA+T P L E V D K FRK+LL +CQ EFE PEI + +D+ +DE+ EKE + KR GH+RFVGEL+K +L + +H
Sbjct: 334 KLSIEKFDKLSDQLIDVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCSKIAQTAMPAITLEEGEVVTDTHK---LFRKLLLQRCQKEFEAK-PEI----EGLADMPEDERLEKELIMKRASLGHIRFVGELFKQRMLSSRIMH 471
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Match: A0A3R7G0R1_9STRA (MI domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G0R1_9STRA) HSP 1 Score: 112 bits (281), Expect = 4.460e-26 Identity = 64/146 (43.84%), Postives = 96/146 (65.75%), Query Frame = 1
Query: 1 QMTLEKFRKLSVAFMNVGLRDEKVVYGVIDMLVEKAQMEPHFSSMYAELCERIARTPISGLGEDP--VGKDASKGSRKFRKMLLGKCQAEFEKDWPEIFLAIQNDSDLADDEKAEKEFLTKRKYTGHMRFVGELYKVELLKEKHVH 432
++++EKF KLS + V +R +V+ GVI+M++ KAQME HFS+MYAELC +IA+T + + +D V +D K FRK+LL +CQ EFE A++ +L+D E+ EKE + KR+ GH+RFVGEL+K +L + +H
Sbjct: 376 KLSIEKFDKLSDQLIEVAVRGLEVLKGVIEMVIAKAQMEWHFSTMYAELCAKIAQTDMPAITQDDNEVTQDTHK---LFRKLLLQRCQKEFE-----AKPAVEGLEELSDSERLEKELIMKRESLGHIRFVGELFKQRMLSSRIMH 513 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27621.7564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27621.7564.1 >prot_H-paniculata_contig27621.7564.1 ID=prot_H-paniculata_contig27621.7564.1|Name=mRNA_H-paniculata_contig27621.7564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp MTLEKFRKLSVAFMNVGLRDEKVVYGVIDMLVEKAQMEPHFSSMYAELCEback to top mRNA from alignment at H-paniculata_contig27621:222..2748- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27621.7564.1 ID=mRNA_H-paniculata_contig27621.7564.1|Name=mRNA_H-paniculata_contig27621.7564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2527bp|location=Sequence derived from alignment at H-paniculata_contig27621:222..2748- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27621:222..2748- >mRNA_H-paniculata_contig27621.7564.1 ID=mRNA_H-paniculata_contig27621.7564.1|Name=mRNA_H-paniculata_contig27621.7564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig27621:222..2748- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |