prot_H-paniculata_contig11173.755.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11173.755.1
Unique Nameprot_H-paniculata_contig11173.755.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length204
Homology
BLAST of mRNA_H-paniculata_contig11173.755.1 vs. uniprot
Match: D8LTP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP8_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 6.950e-35
Identity = 71/157 (45.22%), Postives = 100/157 (63.69%), Query Frame = 0
Query:   39 EVEHLQPAKPDKTSGMVVLGAFVAGSLVGIIICAPAFVVVVFGAGLGGLCLRDGKVGDFARKVGGLGGKVILAVVKKTRELNDRFHIADKAKTLAKDTGSRIQKADEKRGFSKNLKARASSLWSHIDEKTRPR-RALEEQRPPVETSTVTDGTQLPF 194
            E  H +    D+ SG++V G+F+AG+LVG++ICAPAFVV++FGAG   L   D KVG F+RKVG +   ++LAV +  RE N +  + DKAK  AK+   ++     K G   N+KARASSLW  +D++T P  +A  +     + S VTDGTQ+PF
Sbjct:   38 EQPHQEVIAHDEASGIIVFGSFIAGALVGVVICAPAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPF 194          
BLAST of mRNA_H-paniculata_contig11173.755.1 vs. uniprot
Match: D8LTQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ0_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 8.550e-16
Identity = 54/161 (33.54%), Postives = 86/161 (53.42%), Query Frame = 0
Query:   19 VKAVSFDDLAVGSESKLLNIEVEHLQPAKP---DKTSGMVVLGAFVAGSLVGIIIC------APAFVVVVFGAGLGGLCLRDGKVGDFARKVGGLGGKVILAVVKKTRELNDRFHIADKAKTLAKDTGSRIQKADEKRGFSKNLKARASSLWSHIDEKTRP 170
            V A   +  AV ++S  L+ E EH         D++S ++VLG+FVAG+LVG I+C      AP  VV++ GAG       D K G  +R+VG     V LA+ +  RE N ++ +  K +  A++   +++   ++ G    +K RA SLW  +D++T P
Sbjct:    9 VSAPGHEAAAVRNDS-YLDTEQEHHHDESTLAHDESSAIIVLGSFVAGALVGAILCVRVFMFAPTVVVLLCGAGAAVFTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAP 168          
BLAST of mRNA_H-paniculata_contig11173.755.1 vs. uniprot
Match: A0A6H5JUV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV7_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 5.380e-12
Identity = 45/132 (34.09%), Postives = 71/132 (53.79%), Query Frame = 0
Query:   49 DKTSGMVVLGAFVAGSLVGIIICA------PAFVVVVFGAGLGGLCLRDGKVGDF----------ARKVGGLGGKVILAVVKKTRELNDRFHIADKAKTLAKDTGSRIQKADEKRGFSKNLKARASSLWSHI 164
            D++S +++LG+FVAG+L+G IICA      P  VV++ GAG       D +VG F          +R VG     V LA+ +  RE N ++ +ADK K  A++   +++   ++ G    +K RA SLW  +
Sbjct:   41 DESSAIIMLGSFVAGALMGAIICARVFMFAPMVVVLLCGAGAAVFTNSDSEVGKFVVRLRWAGQISRGVGKWTSDVFLALFRVVREFNYKYQLADKVKITAQEAARKVKAEVQRIGICDGVKTRARSLWEQV 172          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11173.755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LTP8_ECTSI6.950e-3545.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LTQ0_ECTSI8.550e-1633.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUV7_9PHAE5.380e-1234.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..203
NoneNo IPR availableTMHMMTMhelixcoord: 55..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11173contigH-paniculata_contig11173:3461..6496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11173.755.1mRNA_H-paniculata_contig11173.755.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11173 883..7465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11173.755.1 ID=prot_H-paniculata_contig11173.755.1|Name=mRNA_H-paniculata_contig11173.755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MCTAKEASTPACGSSQDMVKAVSFDDLAVGSESKLLNIEVEHLQPAKPDK
TSGMVVLGAFVAGSLVGIIICAPAFVVVVFGAGLGGLCLRDGKVGDFARK
VGGLGGKVILAVVKKTRELNDRFHIADKAKTLAKDTGSRIQKADEKRGFS
KNLKARASSLWSHIDEKTRPRRALEEQRPPVETSTVTDGTQLPFGQQIQR
TDI*
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