prot_H-paniculata_contig276.7554.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig276.7554.1
Unique Nameprot_H-paniculata_contig276.7554.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length735
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig276.7554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 554..571
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..308
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 335..339
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 572..734
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 340..359
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 360..553
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 309..334
NoneNo IPR availableTMHMMTMhelixcoord: 552..571
NoneNo IPR availableTMHMMTMhelixcoord: 309..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig276contigH-paniculata_contig276:30178..41618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig276.7554.1mRNA_H-paniculata_contig276.7554.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig276 28857..41701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig276.7554.1 ID=prot_H-paniculata_contig276.7554.1|Name=mRNA_H-paniculata_contig276.7554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=735bp
MSGKKIAKRSAGDVDTATKKKRTLEESKAAARKYQESLRKAGKRPSSPEE
GSSNKKPRVQAAARGFESTRVKKETQRESRKRAKEYAQTLAQPRRQGDTS
NGGASAGRNGAGVDGETTESEQDSGESDEDMPNAAEPDRPTAGHRTVLPT
LPQIPPMPDLNLEVRPAQPLQPPPSNIPGGPSGGSIHSAVGAPGGTRSRP
SFLRHAKPQAPCHLQTPSQGNRLPEGGKSTGEQMRSRGTRESFLNYALQS
GKRTESATPTPLPPSPQPTRTPTVLVEAEDSNSTLDTPGIGVNTPANTTA
DKQRKVKNWAFTGMVALTPLIVFGVVGGVLLHLLPQLKSVVVGMPRVVAS
LPASVVSAARNTWGRVPSFGPKAHSIEKCFLASGDDPSICKVGAEVTDCP
NAAVCGVGKILSCGIPFEYDRIGERCVLNAAARDEVDIVVRALRQSTVMD
QCGLLALTLPTGFRSTITLREAAKEADRQQLSLLASLPPGRVSGLIDLEG
PAALAFGGGYGGFEGVGSGSERIARLSAAAHKEVELPGWCSLGHMLRRNW
KIELVGMIIMLVFLGFVLNIHHTEQSYKERKEVCSIRNESYKALLIHAAN
AGGPMQVSHIQDFVTDKRRDNGGDRVSSKKKVQELWSLVEREVDLDSRIR
RVYLTMRGQRSVPCWEWLSPITNYKVIGDLDPGPPPNGRATSVPRSDRRA
ASGALPDRRTASEAASIQRNASGAQPNRRTTTRS*
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