mRNA_H-paniculata_contig27580.7547.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig27580.7547.1
Unique NamemRNA_H-paniculata_contig27580.7547.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Match: D7FNG9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG9_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 2.280e-90
Identity = 141/246 (57.32%), Postives = 178/246 (72.36%), Query Frame = 1
Query:    1 QIRVGTTSSIFYAPDFVSESEGEEIMSRLYSKTRRAKASTEKVGGGGATAVDAGDDWVTLRTRRLQCWGGEPGKDFKPEPLPSWMEALCDALVARGVFSAEGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHFSPRLAADEIGRPGVNAGPQSSVVLRARCLVVFAEEAYSRLLHGIEAVSEETVG---------------VTGGARVINLDAASVRDGDVVKRRLRVSLTFRRV 693
            ++RVG T SIFY PDF+S ++ ++++ R++     A+AS+              ++WVTLR+RRL+CWGG+PG+ F+PEPLP W++ALC++LV RGVFS E RPNHVL+NEYQ GQGIM HTDGP YEPRTATLSL SDA+MHFSPR+    IGRPGV   PQ+S+VLRA  LVVFA++AYSRLLH I+AV EETVG               V GGA VIN  AA   +G +++R+LRVSLTFRRV
Sbjct:   80 KMRVGNTPSIFYVPDFISGADEQQLLERIH-----AQASS--------------NEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCGGSSGDVGKRGGGGVGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRV 306          
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Match: A0A835ZDT2_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT2_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.320e-55
Identity = 110/237 (46.41%), Postives = 139/237 (58.65%), Query Frame = 1
Query:    7 RVGTTSSIFYAPDFVSESEGEEIMSRLYSKTRRAKASTEKVGGGGATAVDAGDD-WVTLRTRRLQCWGGE---PGKDFKPEPLPSWMEALCDALVARGVFSAEGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHFSPR-LAADEIGRPGVNAGPQSSVVLRARCLVVFAEEAYSRLLHGIEAVSEETVGVTGGAR--VINLDAASVRDGDVV-KRRLRVSLTFRRV 693
            R GT  S++Y PDFV+ S  +EI+ ++Y                   AV  G   W  LRTRRLQCWGG+    G+   P  L  W++ LC  LV  G+F A   PNHVL+NEYQ GQGIMPHTDGP Y PRTATLSL SDA+   + R  +  +IG   V+  P  +++LR R LVVFA+ AY+   HGI+ V EE VG   G    V+N   A V + +VV +R LR+SLTFR V
Sbjct:   14 RTGTIPSVYYNPDFVTASLADEIIKQVY-------------------AVPEGHARWTVLRTRRLQCWGGQLQADGRAHDPSDLCPWLQQLCTLLVTCGIFPAHAPPNHVLINEYQPGQGIMPHTDGPMYYPRTATLSLMSDAVFKLAQRPRSPGDIG--SVDLSPTEALLLRNRSLVVFADAAYTDFTHGIDFVHEEAVGDGSGGTCSVVNGPEAGVAEEEVVVERALRISLTFRHV 229          
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Match: A0A7S2G6U9_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U9_9STRA)

HSP 1 Score: 189 bits (481), Expect = 8.840e-54
Identity = 105/226 (46.46%), Postives = 138/226 (61.06%), Query Frame = 1
Query:   25 SIFYAPDFVSESEGEEIMSRLYSKTRRAKASTEKVGGGGATAVDAGDDWVTLRTRRLQCWGGEPGKDFKPEPLPSWMEALCDALVARGVFSAEGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHFSPRLAADEIGRPGVNAGPQSSVVLRARCLVVFAEEAYSRLLHGIEAVSEETVGVTGGARVINLDAASVRDGDVVKR-RLRVSLTFRRVLR 699
            ++ Y P++V+E E   IM++ Y+                    D+   WVTLR RRLQCWGGEP +D   EPLP W++ L + LV  G+F AE  PNHVL+NEY+AG+GIM HTDG  Y P+TATLSL   A+M F+PR+    +G   V+  P + VVLR R LVVF EEAY   LH I A   + VG    A V NL++A  R G+V+ R  +R+SLTFR ++R
Sbjct:  101 TVSYLPEWVAEDEEAAIMAQTYA------------------VPDSHPSWVTLRGRRLQCWGGEPRRDSAAEPLPPWLQRLSEGLVEAGIFPAEVAPNHVLLNEYKAGEGIMAHTDGDFYHPQTATLSLGGTAVMTFAPRVQPRAVGL--VDGRPVAEVVLRPRSLVVFREEAYLDHLHAIAASHSDEVGAA--APVANLESAGARLGEVIARPAVRLSLTFRHIVR 304          
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Match: A0A7S2G3H8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3H8_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.540e-51
Identity = 91/178 (51.12%), Postives = 119/178 (66.85%), Query Frame = 1
Query:  169 WVTLRTRRLQCWGGEPGK--DFKPEPLPSWMEALCDALVARGVFSAEGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHFSPRLAADEIGRPGVNAGPQSSVVLRARCLVVFAEEAYSRLLHGIEAVSEETVGVTGGARVINLDAASVRDGDVVKR-RLRVSLTFRRV 693
            W++L  RR+QCWGG+P +   F PEPLP W+  +C ALV  GVF +E RPNHVL+NEY  G+GI+PH+DGP Y P+TATLSL   AIM F PR+++ +IG   V++ P   V+LR R LVVF + AY   +H I   S +T  V   A  INL  +  R G++V+R  +RVSLTFR V
Sbjct:   16 WISLSGRRVQCWGGQPNERTKFVPEPLPPWLVDICTALVDAGVFPSEVRPNHVLINEYANGEGILPHSDGPMYFPKTATLSLGGSAIMTFEPRISSGDIGE--VSSDPICEVILRPRSLVVFEDAAYIDYMHAI--ASRQTDQVGSRAVPINLALSGARHGEMVQRPAIRVSLTFRHV 189          
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Match: A0A4D9DGD1_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DGD1_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.550e-48
Identity = 100/233 (42.92%), Postives = 128/233 (54.94%), Query Frame = 1
Query:   13 GTTSSIFYAPDFVSESEGEEIMSRLYSKTRRAKASTEKVGGGGATAVDAGDDWVTLRTRRLQCWGGEPGKD---FKPEPLPSWMEALCDALVARGVFSAEGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHFSPRLAADEIGRPGVNAGPQSSVVLRARCLVVFAEEAYSRLLHGIEAVSEETVGVTGGAR-VINLDAAS--VRDGDVVKRRLRVSLTFRRV 693
            G    +FY P+++S+   +EIM   +S                       + WV LR RRLQC+GG+P ++   F+ E LP W+  +C  L+  GVF  E  PNHVL+NEY+ GQGIM H DGP Y  R A +SL   AI  F  RL A+EI      +GP  +VVL  R L+VF  EAY   LH I AV EE VG T G   V+NL+     +  GD +KR LR+SLT RRV
Sbjct:  129 GPPDGVFYVPEYISKEMEQEIMEVAHSMPV--------------------NQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESGPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLERLEGRINVGDRLKRALRLSLTCRRV 341          
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Match: UPI00165B441C (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165B441C)

HSP 1 Score: 144 bits (364), Expect = 2.890e-39
Identity = 85/225 (37.78%), Postives = 118/225 (52.44%), Query Frame = 1
Query:   25 SIFYAPDFVSESEGEEIMSRLYSKTRRAKASTEKVGGGGATAVDAGDDWVTLRTRRLQCWGGEPG-KDFKPEPLPSWMEALCDALVARGVFSAEGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHF-SPRLAADEIGRPGVNAGPQSSVVLRARCLVVFAEEAYSRLLHGIEAVSEETVGVTGGARVINLDAASVRDGDVVKRRLRVSLTFRRV 693
            +++Y PDF+S  E   ++ ++Y   R                      W  L  RRLQ WGG P  +    E LP+W++  C+ + + G F  +   NHVLVNEY+ G+GIMPH DGP Y P   T+SL S A++ F  P    D      V +  Q S+++R R L+V  ++AY RLLHGI+   ++T+      RV NL AA  R GD + R  RVSLT R V
Sbjct:   22 TVYYVPDFISPEEESYLLQQVYRAPRTK--------------------WTQLSGRRLQNWGGVPHPRGMLGEELPAWLQNYCEKISSLGAFGGK-TANHVLVNEYKRGEGIMPHQDGPLYHPTVTTVSLGSHALLDFYRPVGGPDGEAAQSVESRYQFSLLVRPRSLLVLQDDAYRRLLHGIQERQQDTLT----ERVANLGAAGARPGDTLSRTTRVSLTIRHV 221          
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Match: A0A667ZZL8_9TELE (AlkB homolog 6 n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667ZZL8_9TELE)

HSP 1 Score: 143 bits (360), Expect = 1.150e-38
Identity = 84/231 (36.36%), Postives = 120/231 (51.95%), Query Frame = 1
Query:   25 SIFYAPDFVSESEGEEIMSRLYSKTRRAKASTEKVGGGGATAVDAGDDWVTLRTRRLQCWGGEPG-KDFKPEPLPSWMEALCDALVARGVFSAEGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHFSPRLAADEIGRPGVNAGPQS-------SVVLRARCLVVFAEEAYSRLLHGIEAVSEETVGVTGGARVINLDAASVRDGDVVKRRLRVSLTFRRV 693
            ++FY PDF+SE E   ++ ++Y   R                      W  L  RRLQ WGG P  K    E +P W+E  C+ + + G FS +   NHVLVNEY+ G+GIMPH DGP Y P   T+SL S  ++ F   +++         AGPQ+       S++L+ R L++  +E Y  LLHGI+  S++T+      RV+NL +A    G+ + R  RVSLT R V
Sbjct:   22 TVFYIPDFISEEEEAYLLQQVYQSPRTK--------------------WTQLSGRRLQNWGGLPHPKGMLAEKIPDWLEKYCERISSLGAFSGK-TANHVLVNEYKQGEGIMPHEDGPLYHPTVTTISLGSHTLLDFYRPISSQGA------AGPQTEESRYLLSLLLKPRSLLILQDEMYQHLLHGIQPCSQDTLT----DRVVNLSSAGALPGETLPRGTRVSLTIRHV 221          
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Match: A0A7S0PB53_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PB53_CAFRO)

HSP 1 Score: 145 bits (366), Expect = 1.200e-38
Identity = 85/187 (45.45%), Postives = 110/187 (58.82%), Query Frame = 1
Query:  154 DAGDDWVTLRTRRLQCWGGEP---GKDFKPEPLPSWMEALCDALVARGVFSAEGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHFSPRLAADEIGRPG---VNAGPQSSVVLRARCLVVFAEEAYSRLLHGIEAVSEETVGVTGGARVINLDAASVRDGDVVKRR-LRVSLTFRRV 693
            +A   WV LR RRL  +GG P    +    EPLP W+ A+ D LVA G F  + RPNHVLVN Y  G+GI+PHTDGP Y P TATLSL SDA+M F+PR+ ++ +G      + A       L  R LVVF++EAY+  LH + AV E  V     A+ +N  +    +G ++ R  LRVSLT R V
Sbjct:  123 EASGRWVRLRGRRLLQFGGTPMPGPRLLGREPLPPWLGAVVDRLVATGAFPEDKRPNHVLVNAYGPGEGILPHTDGPLYFPCTATLSLGSDAVMRFAPRVPSELVGTSSQSHLEAAKSFDAGLARRSLVVFSDEAYTSALHDVAAVGEHRVT----AKCLNAASLGWAEGSLIPRAPLRVSLTMRHV 305          
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Match: A0A3Q3ETZ6_KRYMA (AlkB homolog 6 n=2 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3ETZ6_KRYMA)

HSP 1 Score: 141 bits (355), Expect = 5.440e-38
Identity = 86/231 (37.23%), Postives = 122/231 (52.81%), Query Frame = 1
Query:   25 SIFYAPDFVSESEGEEIMSRLYSKTRRAKASTEKVGGGGATAVDAGDDWVTLRTRRLQCWGGEPG-KDFKPEPLPSWMEALCDALVARGVFSAEGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHFSPRLAADEIGRPGVNAGPQS-------SVVLRARCLVVFAEEAYSRLLHGIEAVSEETVGVTGGARVINLDAASVRDGDVVKRRLRVSLTFRRV 693
            +++Y PDF+SE E   ++ ++Y K+ + K                   W  L  RRLQ WGG P  K    E +P W+   CD + + G FS     NHVLVNEY+AG+GIMPH DGP Y P  +T+SL S A++ F   + + E       A PQ+       S++LR R L++  +E Y RLLHGI    ++ +      +V+NL AA  + G+ + R  RVSLT R V
Sbjct:   16 TVYYIPDFISEEEEACLLQQVY-KSPKTK-------------------WTQLSGRRLQNWGGSPHPKGMLVENIPDWLRTYCDRISSLGAFSGR-TANHVLVNEYKAGEGIMPHEDGPLYHPTVSTISLGSHALLDFYRPVGSQE------GAAPQTEENRFVFSLLLRPRSLLLLQDETYLRLLHGIRGRGQDPLT----DQVVNLPAARAQPGETLTRGTRVSLTIRHV 215          
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Match: A0A3B4TVP8_SERDU (AlkB homolog 6 n=7 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B4TVP8_SERDU)

HSP 1 Score: 141 bits (355), Expect = 5.750e-38
Identity = 82/225 (36.44%), Postives = 121/225 (53.78%), Query Frame = 1
Query:   25 SIFYAPDFVSESEGEEIMSRLYSKTRRAKASTEKVGGGGATAVDAGDDWVTLRTRRLQCWGGEPG-KDFKPEPLPSWMEALCDALVARGVFSAEGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHFSPRLAADEIGRPGVNAGPQS-SVVLRARCLVVFAEEAYSRLLHGIEAVSEETVGVTGGARVINLDAASVRDGDVVKRRLRVSLTFRRV 693
            ++ Y PDF+SE E   ++ ++Y K+ + K                   W  L  RRLQ WGG P  K    E +P W++  C+ + + G FS +   NHVLVNEY+ G+GIMPH DGP Y P   T+SL S  ++ F   +++ E   P         S++++ R L++  ++ Y RLLHGI+A +++T+      RV+NL AA    GD + R  RVSLT R V
Sbjct:   18 TVHYIPDFISEDEESYLLQQVY-KSPKTK-------------------WTQLSGRRLQNWGGLPHPKGMLAEKIPDWLQTYCEKISSLGAFSGK-TANHVLVNEYKQGEGIMPHEDGPLYHPTVTTISLGSHTLLDFYTPVSSLEGDAPQTEENRYLFSLLVKPRSLLILQDDMYQRLLHGIQACAQDTLT----DRVVNLSAAGALPGDTLTRDTRVSLTIRHV 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27580.7547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNG9_ECTSI2.280e-9057.32Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A835ZDT2_9STRA2.320e-5546.41Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2G6U9_9STRA8.840e-5446.46Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2G3H8_9STRA4.540e-5151.12Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9DGD1_9STRA4.550e-4842.92Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
UPI00165B441C2.890e-3937.78alpha-ketoglutarate-dependent dioxygenase alkB hom... [more]
A0A667ZZL8_9TELE1.150e-3836.36AlkB homolog 6 n=2 Tax=Myripristis murdjan TaxID=5... [more]
A0A7S0PB53_CAFRO1.200e-3845.45Hypothetical protein n=1 Tax=Cafeteria roenbergens... [more]
A0A3Q3ETZ6_KRYMA5.440e-3837.23AlkB homolog 6 n=2 Tax=Kryptolebias marmoratus Tax... [more]
A0A3B4TVP8_SERDU5.750e-3836.44AlkB homolog 6 n=7 Tax=Percomorphaceae TaxID=14898... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27580contigH-paniculata_contig27580:278..1334 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score280.0
Seed ortholog evalue1e-72
Seed eggNOG ortholog2880.D7FNG9
KEGG koko:K10768
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ferrous iron binding
EggNOG OGsKOG3200@1,KOG3200@2759
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Ec32 orthologEc-01_005500.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons2
Model size702
Cds size702
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929833.2486951-CDS-H-paniculata_contig27580:277..6481622929833.2486951-CDS-H-paniculata_contig27580:277..648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27580 278..648 -
1691481031.123713-CDS-H-paniculata_contig27580:277..6481691481031.123713-CDS-H-paniculata_contig27580:277..648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27580 278..648 -
1622929833.2612252-CDS-H-paniculata_contig27580:1003..13341622929833.2612252-CDS-H-paniculata_contig27580:1003..1334Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27580 1004..1334 -
1691481031.1446426-CDS-H-paniculata_contig27580:1003..13341691481031.1446426-CDS-H-paniculata_contig27580:1003..1334Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27580 1004..1334 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27580.7547.1prot_H-paniculata_contig27580.7547.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig27580 278..1334 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig27580.7547.1

>prot_H-paniculata_contig27580.7547.1 ID=prot_H-paniculata_contig27580.7547.1|Name=mRNA_H-paniculata_contig27580.7547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp
QIRVGTTSSIFYAPDFVSESEGEEIMSRLYSKTRRAKASTEKVGGGGATA
VDAGDDWVTLRTRRLQCWGGEPGKDFKPEPLPSWMEALCDALVARGVFSA
EGRPNHVLVNEYQAGQGIMPHTDGPSYEPRTATLSLESDAIMHFSPRLAA
DEIGRPGVNAGPQSSVVLRARCLVVFAEEAYSRLLHGIEAVSEETVGVTG
GARVINLDAASVRDGDVVKRRLRVSLTFRRVLR*
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mRNA from alignment at H-paniculata_contig27580:278..1334-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig27580.7547.1 ID=mRNA_H-paniculata_contig27580.7547.1|Name=mRNA_H-paniculata_contig27580.7547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1057bp|location=Sequence derived from alignment at H-paniculata_contig27580:278..1334- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATTCGTGTGGGAACAACCTCGTCCATTTTCTATGCCCCCGATTTCGT TTCAGAATCGGAGGGCGAAGAAATTATGTCCCGCCTCTACTCCAAAACTC GCCGAGCAAAGGCAAGCACAGAGAAGGTTGGTGGCGGTGGTGCTACTGCT GTCGATGCGGGAGACGATTGGGTGACGCTTCGAACGCGGCGTTTGCAGTG CTGGGGGGGGGAGCCGGGGAAAGACTTCAAGCCGGAGCCTTTGCCATCTT GGATGGAGGCCCTGTGCGACGCTTTGGTGGCGAGAGGCGTGTTTTCTGCG GAGGGGCGGCCAAATCACGTGCTTGTAAACGGTGTGGAAGCGGGTTCAAG GAAAGAACCCTGTACAACATGTTGTCACTTTTGTTCGTGCAATGAACAAA CGGTTGTCGTGTGTTCTTTTTTCGTTTTCCAGCAACTAGAATTGCCCTAA TCGGTGTTCGCGCACGTCTTTGACATCCGCGTAGATCGTAGCGGGGTGCT GCAACAGGTGGTGTCATGCGACTCACTCATTTGCAGTTTTTCTCTCGCTA TCCCATGGCTCCCAACTCACCACAATCGTATCGCGTATGTAGCGGCCGCG TCAACATGCCTGCATATGTTTCCGATTGTCTTCATGAGCTCTCCTCCGTG CCGGCGTTTGTGATCTCTGTTTTTTGTTCCCCCAAGAGTACCAAGCAGGA CAGGGCATCATGCCGCACACGGATGGCCCATCCTACGAGCCGCGCACCGC AACTCTCAGCCTGGAAAGCGACGCGATTATGCACTTCTCGCCGCGGTTAG CCGCCGACGAAATAGGGCGGCCAGGCGTTAACGCGGGACCACAGTCCTCC GTCGTGCTCAGGGCGCGTTGTCTCGTGGTTTTCGCGGAGGAGGCATACTC ACGATTGTTGCATGGGATTGAGGCTGTCAGCGAGGAGACCGTGGGTGTGA CAGGCGGCGCCCGAGTGATTAACCTTGACGCAGCGAGCGTACGGGACGGT GATGTTGTGAAAAGAAGATTGAGGGTATCCCTTACGTTTAGGAGGGTTCT ACGGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig27580:278..1334-

>mRNA_H-paniculata_contig27580.7547.1 ID=mRNA_H-paniculata_contig27580.7547.1|Name=mRNA_H-paniculata_contig27580.7547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1404bp|location=Sequence derived from alignment at H-paniculata_contig27580:278..1334- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATTCGTGTGGGAACAACCTCGTCCATTTTCTATGCCCCCGATTTCGT
TTCAGAATCGGAGGGCGAAGAAATTATGTCCCGCCTCTACTCCAAAACTC
GCCGAGCAAAGGCAAGCACAGAGAAGGTTGGTGGCGGTGGTGCTACTGCT
GTCGATGCGGGAGACGATTGGGTGACGCTTCGAACGCGGCGTTTGCAGTG
CTGGGGGGGGGAGCCGGGGAAAGACTTCAAGCCGGAGCCTTTGCCATCTT
GGATGGAGGCCCTGTGCGACGCTTTGGTGGCGAGAGGCGTGTTTTCTGCG
GAGGGGCGGCCAAATCACGTGCTTGTAAACGCAGATTCGTGTGGGAACAA
CCTCGTCCATTTTCTATGCCCCCGATTTCGTTTCAGAATCGGAGGGCGAA
GAAATTATGTCCCGCCTCTACTCCAAAACTCGCCGAGCAAAGGCAAGCAC
AGAGAAGGTTGGTGGCGGTGGTGCTACTGCTGTCGATGCGGGAGACGATT
GGGTGACGCTTCGAACGCGGCGTTTGCAGTGCTGGGGGGGGGAGCCGGGG
AAAGACTTCAAGCCGGAGCCTTTGCCATCTTGGATGGAGGCCCTGTGCGA
CGCTTTGGTGGCGAGAGGCGTGTTTTCTGCGGAGGGGCGGCCAAATCACG
TGCTTGTAAACGAGTACCAAGCAGGACAGGGCATCATGCCGCACACGGAT
GGCCCATCCTACGAGCCGCGCACCGCAACTCTCAGCCTGGAAAGCGACGC
GATTATGCACTTCTCGCCGCGGTTAGCCGCCGACGAAATAGGGCGGCCAG
GCGTTAACGCGGGACCACAGTCCTCCGTCGTGCTCAGGGCGCGTTGTCTC
GTGGTTTTCGCGGAGGAGGCATACTCACGATTGTTGCATGGGATTGAGGC
TGTCAGCGAGGAGACCGTGGGTGTGACAGGCGGCGCCCGAGTGATTAACC
TTGACGCAGCGAGCGTACGGGACGGTGATGTTGTGAAAAGAAGATTGAGG
GTATCCCTTACGTTTAGGAGGGTTCTACGGTAGAGTACCAAGCAGGACAG
GGCATCATGCCGCACACGGATGGCCCATCCTACGAGCCGCGCACCGCAAC
TCTCAGCCTGGAAAGCGACGCGATTATGCACTTCTCGCCGCGGTTAGCCG
CCGACGAAATAGGGCGGCCAGGCGTTAACGCGGGACCACAGTCCTCCGTC
GTGCTCAGGGCGCGTTGTCTCGTGGTTTTCGCGGAGGAGGCATACTCACG
ATTGTTGCATGGGATTGAGGCTGTCAGCGAGGAGACCGTGGGTGTGACAG
GCGGCGCCCGAGTGATTAACCTTGACGCAGCGAGCGTACGGGACGGTGAT
GTTGTGAAAAGAAGATTGAGGGTATCCCTTACGTTTAGGAGGGTTCTACG
GTAG
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