prot_H-paniculata_contig2751.7531.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2751.7531.1
Unique Nameprot_H-paniculata_contig2751.7531.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length233
Homology
BLAST of mRNA_H-paniculata_contig2751.7531.1 vs. uniprot
Match: A0A6H5JTC2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTC2_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 7.010e-79
Identity = 132/242 (54.55%), Postives = 164/242 (67.77%), Query Frame = 0
Query:    1 MCSRCYKRESCVRCCGIRFCLRHFHTSNHSSEHPHKAIVVNQEALDKQLPAFQEMWREAFQSVADDVERISQEIGERVAQDPLASIGMPRPAKPRSSGRSGKGSGDANGRSESSTAKRLRREEEKGEPSVKAAAL--ADPFARRRSRPQSYWSIG--------AEGTSSLSEETNSMAPPPATAHMGEYKCELCESMDTSFDIVGGAAGNSRKSETFGNKDAPELVLRVVCHACGYTWMEER 232
            +CSRCYKRESCV+CCG R+CLRHFHTSNHSS+HP KAIV+N+ ALD QLPAF+EMWREAFQSVADDV R+S+++ +RV  DPLASIGM    KP  +G+             S +A                      DPFARRR+RP+SYW++G        AEG+++   +  + A   A    GEY+CE CES +TSFDI+GGAA  +RK+ETFG KDAPEL+LRV+CHACG  W+EER
Sbjct:   16 LCSRCYKRESCVQCCGTRYCLRHFHTSNHSSDHPQKAIVMNRRALDDQLPAFREMWREAFQSVADDVGRLSRDVSKRVEDDPLASIGMA--LKPVRNGKHPXXXXXXXXHQSSGSASSXXXXXXXXXXXXXXXXXXXVDPFARRRTRPKSYWAVGHELDAPEEAEGSAA---DERAAAIAAAAPRAGEYQCESCESDNTSFDIIGGAAVGTRKAETFGKKDAPELILRVLCHACGNNWLEER 252          
BLAST of mRNA_H-paniculata_contig2751.7531.1 vs. uniprot
Match: A0A836CMQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ6_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.510e-34
Identity = 84/253 (33.20%), Postives = 119/253 (47.04%), Query Frame = 0
Query:    1 MCSRCYKRESCVRCCGIRFCLRHFHTSNHSSEHPHKAIVVNQEALDKQLPAFQEMWREAFQSVADDVERISQEIGERVAQDPLASIGM-PRPAKPRSSGRSGKGSGDANGRSESSTAKRLRREEEKGEPSVKAAAL---------------------ADPFARRRSRPQSYWSIGAEGTSSLSEETNSMAPPPATAHMGEYKCELCESMDTSFDIVGGAAGNSRKSETFGNKDAPELVLRVVCHACGYTWMEE 231
            MCSRC  R + + CC    CLRHFHTS H+S HP KA V+NQEA D Q   F   W+  F+SV  D+E+I++++ E V+ DPL +IGM P   K  S+G               +  +R+ R+                                   D   RR+    +YW++G   T  L                  Y+C++C S +T F  +GG  G +RK ET+GNK+A  L++R+ C  CG +W EE
Sbjct:   18 MCSRCTTRPAAISCCSTALCLRHFHTSEHASAHPSKATVINQEAADLQHDDFARQWKATFESVQADIEQITEQM-EAVSNDPLGAIGMMPTLNKAPSAG-------------VLAAEQRMSRKPSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVSKRRKPSRTTYWAVGDPSTGVL--------------RGSRYRCDVCHSDNTIFSSIGGDGGQTRKGETWGNKEAAALMVRIDCRNCGRSWTEE 242          
BLAST of mRNA_H-paniculata_contig2751.7531.1 vs. uniprot
Match: B5Y3Z5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3Z5_PHATC)

HSP 1 Score: 62.0 bits (149), Expect = 9.520e-8
Identity = 69/248 (27.82%), Postives = 103/248 (41.53%), Query Frame = 0
Query:   19 FCLRHFHTSNHSSEHPHKAIVVNQEALDKQLPAFQEMWREAFQSVADDVERISQEIGERVAQDPLA--------SIGMPRPAKPRSSGRSGKG-------------SGDANGRSESSTAKRLRREEEKGEPSVKAAALADPFARRRSRPQSYWSI----------GAEGTSSLSEETNSMAPPPATAHMGEYKCELCESMDTSFDIVGGAAGNSR---KSETFGNKD-APELVLRVVCHACGYTWMEE 231
            +CL H+++S+          V++QE L++QLPA QE++ EA+ S+  ++   S     R   DPLA        S   P  A P+    S  G             +     R +S    R+ +  E   P+ K   ++D   RR S  +S W++           A+G   +S E    A  P T  + +  C  C S     +IVG     ++   K E +GNKD   E V R  C  C  TW EE
Sbjct:   58 YCLLHYYSSSAIRTDVKYVTVLDQEELNRQLPAVQELFSEAYVSLQQELSEQSARAFSRHQHDPLAILHDLNKKSRKAPPAATPKKVDYSAGGFIREVPLPERLLHTQQQQARLQSHLISRMEKASESARPTSK---ISDLSRRRPSSRKSIWNVVMDQPTKKQNSAKGE--ISTERKKYAIHPDTTIVDDTTCSACGSHQV--EIVGSNTSRNQDATKGEIWGNKDRGDETVTRYRCLNCARTWNEE 298          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2751.7531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JTC2_9PHAE7.010e-7954.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CMQ6_9STRA1.510e-3433.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B5Y3Z5_PHATC9.520e-827.82Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2751contigH-paniculata_contig2751:3986..6585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2751.7531.1mRNA_H-paniculata_contig2751.7531.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2751 3986..6591 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2751.7531.1 ID=prot_H-paniculata_contig2751.7531.1|Name=mRNA_H-paniculata_contig2751.7531.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
MCSRCYKRESCVRCCGIRFCLRHFHTSNHSSEHPHKAIVVNQEALDKQLP
AFQEMWREAFQSVADDVERISQEIGERVAQDPLASIGMPRPAKPRSSGRS
GKGSGDANGRSESSTAKRLRREEEKGEPSVKAAALADPFARRRSRPQSYW
SIGAEGTSSLSEETNSMAPPPATAHMGEYKCELCESMDTSFDIVGGAAGN
SRKSETFGNKDAPELVLRVVCHACGYTWMEER*
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