prot_H-paniculata_contig2750.7528.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2750.7528.1
Unique Nameprot_H-paniculata_contig2750.7528.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length683
Homology
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Match: D8LSS5_ECTSI (Neural cell expressed, developmentally down-regulated 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSS5_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 8.590e-50
Identity = 243/705 (34.47%), Postives = 305/705 (43.26%), Query Frame = 0
Query:    3 LTLGSATS--TMLGASHSDGSVRLWDLGRGSCSRELKKQHRGEASGIAFHPQNPSLVATVGLDGLVHCVDIRVGDSA-GGSGNG-LRSTETGVPLTCVSFHHEGLILAVGASDGTVRLVDLRSARQI---DRPQNAFAGPSPPKRGVRDVRFQFVNPRHNHNTSMVSTSNSSTPSFSSNSSFGDRKNASGGXXXXRAERAAGGTSSAPRTN-GARGXXXXXXXXXXXXXSSSGGVSFSDSRKMRRKKPGSMNSNSNGDIQHPSSXXXXXXXXXXXXXXXXXXXXXXAHAPVQHPPDPLTA------APS------STTPSRKHWSXXXXXXXXXXXXNGA-LPSPPKYASAMLPATASISLDNRFREKNMTANNNYINSSYVHLLSRGGGGAGEGGIDGRPGDRAAIGGXXXXXXXGPEFSTSAGSGYSDEDEVERRGEDEGENNDRQSTKRAGTRHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGREKQSGRDTAGFSSARDNN---DSNNAVLRRRAMKGSASVSVGFQALSGSMSVSASESQQRRGAALEAHGIEDAGEVPSRQAPLGAA-GAPTTAGSGSSAGVQQVVALDRSVLEQILSSHVSGLKEELRQEIRNLHMDVLRQFHSLQDEQAAAMSGFEERLGGLVAENQALRAENDRLRRVY 682
            L++ SA +   MLG S++DG+VRLWD G  +C RE++ QHRG A+GI FHPQNP+LVAT G DG+V C D+RVG+   GG G+G L+S +T  PLTCVSFHHEGL LA GASDGTVRLVDLR+AR+     RP     G                            T+   TP+ ++  +         G      + AA    + P  + G+ G                G +              + +S  NGD    S+  XXXXXXXXXXX          H      P+   A      AP       +T P      XXXXXXXX    NGA  P    Y  +     A++          + A   + NSS    ++ G         D R   R   GG       G   +T  G  +  +      G   G   DR +        G                                                                G    SGR T     +R  +    S +   R+ AM      + G                 R GAA+    +   GE   R+ P G   GA  TAG G      QVV+LDRSVLEQ+LS+HVSGL+EELRQE+RNLH+D+LRQFHSLQDEQ+ A+SGFEERLGGLVAENQALRAENDRLRRVY
Sbjct:  173 LSMASAAAGPAMLGVSYADGTVRLWDTGSRACVREMQTQHRGAAAGIVFHPQNPNLVATAGHDGVVRCTDVRVGERKDGGGGDGVLKSIQTDAPLTCVSFHHEGLALAAGASDGTVRLVDLRTAREAINSARPTRVSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTT---TPAVATEVA---------GVGNPAGKAAAAVAEATPYFSVGSHG----------------GPIQXXXXXXXXXAAENTSSSKGNGD----SAPGXXXXXXXXXXXAALASSSRQRHQDPYGVPNEAPAGVGGGGAPRYGNQSVATPPXXXXXXXXXXXXXXRGSSNGAPAPRAQDYVDSAAAVAAAV----------VPAGRPWPNSSSPERVAAG--------FDRR---RRENGGSLGVAGGG--MTTGEGDEWDVQPPTTAYGNKSGGEYDRATVLSTPDSRGARVDA-----------------------------------------------------------GGGGGSGRGTRMNGDSRAGSGVFSSPSGAPRKPAMHSGGPSTAGGVG--------------RTGAAV----VAGDGEAIVRREPRGEEEGAAPTAGGG------QVVSLDRSVLEQVLSNHVSGLREELRQELRNLHVDMLRQFHSLQDEQSTALSGFEERLGGLVAENQALRAENDRLRRVY 739          
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Match: A0A6G0W3M7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W3M7_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.320e-8
Identity = 41/110 (37.27%), Postives = 56/110 (50.91%), Query Frame = 0
Query:   13 LGASHSDGSVRLWDLGRGSCSRELKKQHRGEASGIAFHPQNPSLVATVGLDGLVHCVDIRVGDSAGGSGNGLRSTETGVPLTCVSFHHEGLILAVGASDGTVRLVDLRSA 122
            LG  ++ G++RLWDL   S    L + H   A+ + F P +  LVAT GLD  V   D+       G    +   E+  P+T +S H  G +LA G S G V L DLR+A
Sbjct:  185 LGCVYASGALRLWDLATMSLQTSLSRLHWAPATRVVFSPIHKHLVATSGLDKRVVFTDV-------GLSKEINCLESPHPITAMSMHPHGQVLATGTSTGHVLLYDLRNA 287          
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Match: A0A2V0P192_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P192_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 1.520e-7
Identity = 60/197 (30.46%), Postives = 91/197 (46.19%), Query Frame = 0
Query:   13 LGASHSDGSVRLWDLGRGSCSRELKKQHRGEASGIAFHPQNPSLVATVGLDGLVHCVDIRVGDSAGGSGNGLRSTETGVPLTCVSFHHEGLILAVGASDGTVRLVDLRSARQIDRPQNAFAGPSPPKRG-VRDVRFQFVNPRHNHNTSMVSTSNSSTPSFSSNSSFGDRKNASGGXXXXRAERAAGGTSSAPRTNGA 208
            L A+  DGSV +W +   +  +EL++ HRG A+G+ F P NPSL+ + G D  +  +D R           L + +    LTC+    +   +A G + G V + DLR      RP  A    S  ++G VR VR+Q      + + +  +TS S+ P+ S+    G R   +G      A    GG   A R  GA
Sbjct:  185 LAAASDDGSVCVWSVRARTPRQELRRLHRGGATGVRFAPDNPSLLYSCGADMRLVVIDTRQPSGPQQEALTLHAPQA---LTCMDVRFDARTIAAGTAGGGVLVFDLR------RPGPASGVYSFGEQGPVRCVRWQNAPHSSSKHRAGQATSVSAAPTVSAGGQLGGRPALNGAAAPAAALGGRGGMIGAGRAAGA 372          
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Match: A0A485KEU9_9STRA (Aste57867_3285 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KEU9_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.440e-7
Identity = 37/101 (36.63%), Postives = 52/101 (51.49%), Query Frame = 0
Query:   13 LGASHSDGSVRLWDLGRGSCSRELKKQHRGEASGIAFHPQNPSLVATVGLDGLVHCVDIRVGDSAGGSGNGLRSTETGVPLTCVSFHHEGLILAVGASDGT 113
            LG  HS G++RLWD+   S      + H   A+ IAF P + +LVAT GLD  +   D+ +G         +   E+  P+T +S H  G +LA G S GT
Sbjct:  184 LGVVHSSGALRLWDVPTASLVAAFPRLHWAPATCIAFSPVHKNLVATAGLDKRIVFCDLSLGQE-------MNCLESPHPITSLSMHANGSLLATGTSTGT 277          
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Match: F6HNT4_VITVI (Uncharacterized protein n=3 Tax=Vitis TaxID=3603 RepID=F6HNT4_VITVI)

HSP 1 Score: 63.9 bits (154), Expect = 8.370e-7
Identity = 36/106 (33.96%), Postives = 51/106 (48.11%), Query Frame = 0
Query:   19 DGSVRLWDLGRGSCSRELKKQHRGEASGIAFHPQNPSLVATVGLDGLVHCVDIRVGDSAGGSGNGLRSTETGVPLTCVSFHHEGLILAVGASDGTVRLVDLRSARQ 124
            DGS+ +WD    S      KQH    +G++F P N  ++ATVGLD  ++  D        GS           P + ++F  +GLILA G S+G V   D+R   Q
Sbjct:  199 DGSIHMWDTTGRSPKVSWLKQHSAPTAGVSFSPSNDKIIATVGLDKKLYTFDT-------GSRRPSSCIPYEAPFSSLAFRDDGLILAAGTSNGRVVFYDVRGKPQ 297          
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Match: B9SE21_RICCO (Uncharacterized protein n=2 Tax=Ricinus communis TaxID=3988 RepID=B9SE21_RICCO)

HSP 1 Score: 63.5 bits (153), Expect = 1.100e-6
Identity = 39/115 (33.91%), Postives = 53/115 (46.09%), Query Frame = 0
Query:   19 DGSVRLWDLGRGSCSRELKKQHRGEASGIAFHPQNPSLVATVGLDGLVHCVDIRVGDSAGGSGNGLRSTETGVPLTCVSFHHEGLILAVGASDGTVRLVDLRSARQIDRPQNAFA 133
            DGSV LWD    +      KQH    +GI+F P N  ++A+VGLD  ++  D        GS           P + ++F  +GLILA G S G V   D+R   Q      AF+
Sbjct:  198 DGSVHLWDTTGRNPKVSWLKQHSAPTAGISFSPSNDKIIASVGLDKKLYTFDA-------GSRRPSSCISYEAPFSSLAFRDDGLILAAGTSSGRVVFYDVRGKPQPFNVLRAFS 305          
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Match: A0A2K1ZCM4_POPTR (Uncharacterized protein n=11 Tax=Saliceae TaxID=238069 RepID=A0A2K1ZCM4_POPTR)

HSP 1 Score: 63.2 bits (152), Expect = 1.450e-6
Identity = 39/106 (36.79%), Postives = 51/106 (48.11%), Query Frame = 0
Query:   19 DGSVRLWDLGRGSCSRELKKQHRGEASGIAFHPQNPSLVATVGLDGLVHCVDIRVGDSAGGSGNGLRSTETGVPLTCVSFHHEGLILAVGASDGTVRLVDLRSARQ 124
            DGSV LWD    S      KQH    +GI+F P N  ++A+VGLD  ++  D     S       L S E   P + +SF  +G +LA G S G V   D+R   Q
Sbjct:  199 DGSVHLWDTTGRSPKVSWSKQHSAPTAGISFSPSNDKIIASVGLDKKLYTYD-----SGSRRHTSLISYEA--PFSSLSFRDDGWVLAAGTSSGRVVFYDVRGKPQ 297          
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Match: A0A0D2MXY0_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MXY0_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 1.840e-6
Identity = 35/112 (31.25%), Postives = 54/112 (48.21%), Query Frame = 0
Query:   13 LGASHSDGSVRLWDLGRGSCSRELKKQHRGEASGIAFHPQNPSLVATVGLDGLVHCVDIRVGDSAGGSGNGLRSTETGVPLTCVSFHHEGLILAVGASDGTVRLVDLRSARQ 124
            L  +  DG V +W +   +   EL++ HRG A+G+ F P +P ++ + G DG +  +D R             + +   PLTC+    +   LAVG S G V + DLR   Q
Sbjct:  187 LATASDDGGVAVWSVAARAARHELRRLHRGGATGVRFAPDSPHVLYSCGKDGRLLVLDTRQPTQ---QQQETLAAQASQPLTCLDARFDARSLAVGTSGGAVLVFDLRRPGQ 295          
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Match: UPI001262F22A (protein NEDD1 n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001262F22A)

HSP 1 Score: 62.8 bits (151), Expect = 1.900e-6
Identity = 36/106 (33.96%), Postives = 51/106 (48.11%), Query Frame = 0
Query:   19 DGSVRLWDLGRGSCSRELKKQHRGEASGIAFHPQNPSLVATVGLDGLVHCVDIRVGDSAGGSGNGLRSTETGVPLTCVSFHHEGLILAVGASDGTVRLVDLRSARQ 124
            DG+V LWD    S      KQH    +GI+F P    ++A+VGLD  ++  D        GS           P + ++F  +GL+LA G S+G V   D+RS  Q
Sbjct:  198 DGTVNLWDTTGRSPKASWLKQHSAPTAGISFSPSTDKIIASVGLDKKLYTYD-------SGSRRPSSCITYEAPFSSLAFRDDGLVLAAGTSNGRVVFYDIRSKPQ 296          
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Match: A0A1Y2H037_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H037_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 2.440e-6
Identity = 49/166 (29.52%), Postives = 73/166 (43.98%), Query Frame = 0
Query:   10 STMLGASHSDGSVRLWDLGRGSCS---RELKKQHRGEASGIAFHPQNPSLVATVGLDGLVHCVDIRVGDSAGGSGNGLRSTETGVPLTCVSFHHEGLILAVGASDGTVRLVDLRSARQ--------IDRPQNAFAGPSPPKRGVRDVRFQFVNPRHNHNTSMVSTS 164
            S + G   +DGS+RLW+ G    +         H+   +G+AF P N  L+ TVG D      D+            +++T T   LT VSF ++G+ LA G   G V L DLRS  +        +D P  A      P   ++  +   +N R N  T +V +S
Sbjct:  132 SILGGVGSNDGSLRLWNTGESGSTAIYHSFDPTHKMPITGMAFSPFNRYLICTVGQDKRYALYDVE-------KKKVIKATMTDYALTSVSFKNDGVSLAFGTDQGKVLLYDLRSTNRPISIVDTMVDAPVTAVHFQGKPSSSMKRHQTIALN-RQNPTTEIVKSS 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2750.7528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSS5_ECTSI8.590e-5034.47Neural cell expressed, developmentally down-regula... [more]
A0A6G0W3M7_9STRA1.320e-837.27Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2V0P192_9CHLO1.520e-730.46Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A485KEU9_9STRA2.440e-736.63Aste57867_3285 protein n=1 Tax=Aphanomyces stellat... [more]
F6HNT4_VITVI8.370e-733.96Uncharacterized protein n=3 Tax=Vitis TaxID=3603 R... [more]
B9SE21_RICCO1.100e-633.91Uncharacterized protein n=2 Tax=Ricinus communis T... [more]
A0A2K1ZCM4_POPTR1.450e-636.79Uncharacterized protein n=11 Tax=Saliceae TaxID=23... [more]
A0A0D2MXY0_9CHLO1.840e-631.25Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
UPI001262F22A1.900e-633.96protein NEDD1 n=2 Tax=Anacardiaceae TaxID=4011 Rep... [more]
A0A1Y2H037_9FUNG2.440e-629.52Uncharacterized protein n=1 Tax=Lobosporangium tra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 661..681
NoneNo IPR availablePANTHERPTHR44414FAMILY NOT NAMEDcoord: 598..681
coord: 12..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..682
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 29..70
e-value: 0.001
score: 28.4
coord: 80..118
e-value: 0.036
score: 23.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 93..117
e-value: 0.025
score: 15.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 6..183
e-value: 3.3E-23
score: 84.3
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 13..27
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..127
score: 12.921
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 10..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2750contigH-paniculata_contig2750:9464..16557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2750.7528.1mRNA_H-paniculata_contig2750.7528.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2750 8735..19915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2750.7528.1 ID=prot_H-paniculata_contig2750.7528.1|Name=mRNA_H-paniculata_contig2750.7528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=683bp
MPLTLGSATSTMLGASHSDGSVRLWDLGRGSCSRELKKQHRGEASGIAFH
PQNPSLVATVGLDGLVHCVDIRVGDSAGGSGNGLRSTETGVPLTCVSFHH
EGLILAVGASDGTVRLVDLRSARQIDRPQNAFAGPSPPKRGVRDVRFQFV
NPRHNHNTSMVSTSNSSTPSFSSNSSFGDRKNASGGGAAARAERAAGGTS
SAPRTNGARGGAGGTGGSGGSGKSSSGGVSFSDSRKMRRKKPGSMNSNSN
GDIQHPSSPSSSSAATRAAAAAAPATATTHAHAPVQHPPDPLTAAPSSTT
PSRKHWSNNSGGGNGGGGGNGALPSPPKYASAMLPATASISLDNRFREKN
MTANNNYINSSYVHLLSRGGGGAGEGGIDGRPGDRAAIGGGGGGGGVGPE
FSTSAGSGYSDEDEVERRGEDEGENNDRQSTKRAGTRHGGSASSASAAAA
VANNRPSSPSRRRRGSRSPERNRREDSEDGGRNAEAAGDAERFDNDDGGG
GGYGREKQSGRDTAGFSSARDNNDSNNAVLRRRAMKGSASVSVGFQALSG
SMSVSASESQQRRGAALEAHGIEDAGEVPSRQAPLGAAGAPTTAGSGSSA
GVQQVVALDRSVLEQILSSHVSGLKEELRQEIRNLHMDVLRQFHSLQDEQ
AAAMSGFEERLGGLVAENQALRAENDRLRRVY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf