mRNA_H-paniculata_contig2750.7527.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2750.7527.1
Unique NamemRNA_H-paniculata_contig2750.7527.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.690e-71
Identity = 102/206 (49.51%), Postives = 141/206 (68.45%), Query Frame = 1 
Query:    1 SAAGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWELFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYGVAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTPGLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPVGPILRK 618
            S AGNDG RFSHL+ I NT  G+E F   + S W+R +  P+ FPP+FW L+ +S+L+ALGEKCRP+C+G T RR +AAG VR+++PKLEE+     Q+GVAV+GG   + + A+  HQ GHW++  DC+NAFN+ K   I+ + A   P L  + A+CY E PA  I+ MD+G+RR I   +G+ QGDG+GP LFC  + PI+ K
Sbjct:   16 SGAGNDGQRFSHLKSIVNTKTGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKRSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 221
[Close]
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 8.950e-68
Identity = 103/206 (50.00%), Postives = 141/206 (68.45%), Query Frame = 1 
Query:    1 SAAGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWELFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYGVAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTPGLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPVGPILRK 618
            S AGNDG RFSHL+ I NT  G+E F   + S W+R +  P+ FPP+FW L+ QS+L+ALGEKCRP+C+G T RR +AAG VR+++PKLEE+     Q+GVAV+GG   + + A+  HQ GHW++  DC+NAFN+ K   I+ + A   P L  + A+CY E PA  I+ MD+G+RR I   +G+ QGDG+GP LFC  + PI+ K
Sbjct:   15 SGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLK 220
[Close]
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 1.300e-67
Identity = 101/206 (49.03%), Postives = 137/206 (66.50%), Query Frame = 1 
Query:    1 SAAGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWELFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYGVAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTPGLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPVGPILRK 618
            S AGNDG RFSHL+ I N   G+E F   +   W+R +  P+ FPP+FW L+ QS+L+ALGEKCRP+C+G T RR +AAG VR+++PKLEE+     Q+GVAV+GG   + + A+  HQ GHW++  DC+NAFN+ K   I+ + A   P L  + A+CY E PA  I+ MD+G RR I    G+ QGDG+GP LFC  + PI+ K
Sbjct:  106 SGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILK 311
[Close]
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 3.530e-66
Identity = 103/206 (50.00%), Postives = 141/206 (68.45%), Query Frame = 1 
Query:    1 SAAGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWELFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYGVAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTPGLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPVGPILRK 618
            S AGNDG RFSHL+ I NT  G+E F   + S W+R +  P+ FPP+FW L+ QS+L+ALGEKCRP+C+G T RR +AAG VR+++PKLEE+     Q+GVAV+GG   + + A+  HQ GHW++  DC+NAFN+ K   I+ + A   P L  + A+CY E PA  I+ MD+G+RR I   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  405 SGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 610
[Close]
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 7.270e-66
Identity = 102/206 (49.51%), Postives = 140/206 (67.96%), Query Frame = 1 
Query:    1 SAAGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWELFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYGVAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTPGLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPVGPILRK 618
            S AGNDG RFSHL+ I NT  G+E F   + S W+R ++ P  FPP+FW L  QS+L+ALGEKCRP+C+G T RR +AAG VR+++PKLEE+     Q+GVAV+GG   + + A+  HQ GHW++  DC+NAFN+ K   I+ + +   P L  + A+CY E PA  I+ MD+G+RR I   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  383 SGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 588
[Close]
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 1.120e-65
Identity = 100/206 (48.54%), Postives = 137/206 (66.50%), Query Frame = 1 
Query:    1 SAAGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWELFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYGVAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTPGLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPVGPILRK 618
            S AGNDG RFSHL+ I NT  G+E F   + S W+R +  P+ FPP+FW L+ QS+L+ALGEKCRP+C+G T RR +AAG VR+++PKLEE+     Q+GVAV+GG   + + A+   Q GHW++  DC+N  N+ K   I+ + A   P L    A+CY E PA  I+ MD+G+RR I   +G+ QGDG+GP LFC  + PI+ K
Sbjct:   61 SGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 265
[Close]
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Match: A0A6H5KAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK8_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 1.250e-65
Identity = 102/206 (49.51%), Postives = 139/206 (67.48%), Query Frame = 1 
Query:    1 SAAGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWELFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYGVAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTPGLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPVGPILRK 618
            S A NDG RFSHL  I NT  G+E F   + S W+R +  P+ FPP+FW L+ QS+L+ALGEKCRP+C+G T RR +AAG VR+++PKLEE+     Q+GVAV+GG   + + A+  HQ GHW++  DC+NAFN+ K   I+ + A   P L  + A+CY E PA  I+ MD+G+RR I   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  334 SGADNDGQRFSHLTSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKNVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 539
[Close]
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 2.260e-65
Identity = 103/206 (50.00%), Postives = 141/206 (68.45%), Query Frame = 1 
Query:    1 SAAGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWELFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYGVAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTPGLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPVGPILRK 618
            S AGNDG RFSHL+ I NT  G+E F   + S W+R +  P+ FPP+FW L+ QS+L+ALGEKCRP+C+G T RR +AAG VR+++PKLEE+     Q+GVAV+GG   + + A+  HQ GHW++  DC+NAFN+ K   I+ + A   P L  + A+CY E PA  I+ MD+G+RR I   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  384 SGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 589
[Close]
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 2.710e-64
Identity = 100/204 (49.02%), Postives = 138/204 (67.65%), Query Frame = 1 
Query:    7 AGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWELFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYGVAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTPGLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPVGPILRK 618
            AGNDG RFSHL+ I NT  G+E F   + S W+R +  P+ FPP+FW L+  S+L+ALGEKCRP+C+G T RR +AAG VR+++PKLEE+     Q+GVAV+GG   + + A+  HQ GHW++  DC+NAFN+ K   I+ + A   P L  + A+CY E PA  I+ MD+G+ R I   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  393 AGNDGRRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKLSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLK 596
[Close]
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Match: A0A6H5K195_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K195_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 5.690e-64
Identity = 101/206 (49.03%), Postives = 138/206 (66.99%), Query Frame = 1 
Query:    1 SAAGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWELFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYGVAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTPGLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPVGPILRK 618
            S AGNDG RFSHL+ I NT  G+E F   + S W+R +  P+ FPP+FW L+ QS+L+ALGEKCRP+C+G T RR +AAG VR+++PKLEE+     Q+GVA +GG   + + A+  HQ GHW++  DC+NAFN  K    + + A   P L  + A+CY E PA  I+ MD+G+RR I   +G+ QGDG+GP LFC  + PI+ K
Sbjct:  392 SGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNMGKRTATMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 597
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2750.7527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Y4_9PHAE1.690e-7149.51Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE8.950e-6850.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KR59_9PHAE1.300e-6749.03Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JI32_9PHAE3.530e-6650.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE7.270e-6649.51Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KT19_9PHAE1.120e-6548.54Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KAK8_9PHAE1.250e-6549.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMQ2_9PHAE2.260e-6550.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KA96_9PHAE2.710e-6449.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K195_9PHAE5.690e-6449.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2750contigH-paniculata_contig2750:363..986 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score67.4
Seed ortholog evalue9e-09
Seed eggNOG ortholog400682.PAC_15708731
Preferred nameCWC27
KEGG koko:K01802,ko:K12737
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005911,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009506,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030054,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0055044,GO:0070013,GO:0071012,GO:0071013,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1902494,GO:1990904
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0885@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03041,ko03110
Exons1
Model size624
Cds size624
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929831.1082087-CDS-H-paniculata_contig2750:362..9861622929831.1082087-CDS-H-paniculata_contig2750:362..986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2750 363..986 -
1691481030.1386433-CDS-H-paniculata_contig2750:362..9861691481030.1386433-CDS-H-paniculata_contig2750:362..986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2750 363..986 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2750.7527.1prot_H-paniculata_contig2750.7527.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2750 363..986 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2750.7527.1

>prot_H-paniculata_contig2750.7527.1 ID=prot_H-paniculata_contig2750.7527.1|Name=mRNA_H-paniculata_contig2750.7527.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp
SAAGNDGLRFSHLQCIPNTSAGKEGFGPVVGSFWQRSMEQPDVFPPDFWE
LFLQSNLMALGEKCRPICVGSTMRRTLAAGVVRQYRPKLEEVNVWEQQYG
VAVSGGAGLMGLRAKAHHQLGHWLIALDCTNAFNSVKWAVILEEVAVRTP
GLTPFDAKCYGEEPAYIIFQMDTGKRRRISSITGIHQGDGLGPALFCMPV
GPILRKC*
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mRNA from alignment at H-paniculata_contig2750:363..986-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2750.7527.1 ID=mRNA_H-paniculata_contig2750.7527.1|Name=mRNA_H-paniculata_contig2750.7527.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=624bp|location=Sequence derived from alignment at H-paniculata_contig2750:363..986- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCGCGGCGGGTAACGATGGCCTACGTTTCTCCCATCTGCAGTGCATCCC
GAACACCTCGGCGGGGAAGGAAGGTTTTGGCCCCGTTGTCGGGTCTTTCT
GGCAGCGCTCCATGGAACAACCCGACGTCTTCCCGCCGGATTTCTGGGAG
CTGTTCCTCCAAAGCAACCTAATGGCGCTTGGGGAGAAGTGCCGCCCGAT
CTGCGTGGGATCTACGATGCGGCGTACTTTAGCCGCTGGAGTGGTCAGGC
AATACAGGCCAAAACTGGAGGAGGTAAACGTGTGGGAGCAGCAGTACGGG
GTAGCGGTCTCGGGTGGCGCAGGGCTCATGGGCCTCCGCGCGAAAGCACA
CCACCAACTGGGGCATTGGCTTATCGCCCTCGACTGCACCAATGCCTTCA
ACTCCGTCAAGTGGGCGGTGATCTTGGAAGAAGTGGCAGTCCGCACCCCG
GGACTAACACCCTTCGATGCCAAATGCTACGGGGAGGAGCCGGCATATAT
CATTTTCCAGATGGACACCGGCAAACGCAGGAGAATCTCCTCGATCACGG
GAATCCACCAGGGTGACGGACTGGGACCCGCCCTCTTCTGCATGCCCGTG
GGACCGATCTTGCGCAAGTGCTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig2750:363..986-

>mRNA_H-paniculata_contig2750.7527.1 ID=mRNA_H-paniculata_contig2750.7527.1|Name=mRNA_H-paniculata_contig2750.7527.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at H-paniculata_contig2750:363..986- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCGCGGCGGGTAACGATGGCCTACGTTTCTCCCATCTGCAGTGCATCCC
GAACACCTCGGCGGGGAAGGAAGGTTTTGGCCCCGTTGTCGGGTCTTTCT
GGCAGCGCTCCATGGAACAACCCGACGTCTTCCCGCCGGATTTCTGGGAG
CTGTTCCTCCAAAGCAACCTAATGGCGCTTGGGGAGAAGTGCCGCCCGAT
CTGCGTGGGATCTACGATGCGGCGTACTTTAGCCGCTGGAGTGGTCAGGC
AATACAGGCCAAAACTGGAGGAGGTAAACGTGTGGGAGCAGCAGTACGGG
GTAGCGGTCTCGGGTGGCGCAGGGCTCATGGGCCTCCGCGCGAAAGCACA
CCACCAACTGGGGCATTGGCTTATCGCCCTCGACTGCACCAATGCCTTCA
ACTCCGTCAAGTGGGCGGTGATCTTGGAAGAAGTGGCAGTCCGCACCCCG
GGACTAACACCCTTCGATGCCAAATGCTACGGGGAGGAGCCGGCATATAT
CATTTTCCAGATGGACACCGGCAAACGCAGGAGAATCTCCTCGATCACGG
GAATCCACCAGGGTGACGGACTGGGACCCGCCCTCTTCTGCATGCCCGTG
GGACCGATCTTGCGCAAGTGCTGATCCGCGGCGGGTAACGATGGCCTACG
TTTCTCCCATCTGCAGTGCATCCCGAACACCTCGGCGGGGAAGGAAGGTT
TTGGCCCCGTTGTCGGGTCTTTCTGGCAGCGCTCCATGGAACAACCCGAC
GTCTTCCCGCCGGATTTCTGGGAGCTGTTCCTCCAAAGCAACCTAATGGC
GCTTGGGGAGAAGTGCCGCCCGATCTGCGTGGGATCTACGATGCGGCGTA
CTTTAGCCGCTGGAGTGGTCAGGCAATACAGGCCAAAACTGGAGGAGGTA
AACGTGTGGGAGCAGCAGTACGGGGTAGCGGTCTCGGGTGGCGCAGGGCT
CATGGGCCTCCGCGCGAAAGCACACCACCAACTGGGGCATTGGCTTATCG
CCCTCGACTGCACCAATGCCTTCAACTCCGTCAAGTGGGCGGTGATCTTG
GAAGAAGTGGCAGTCCGCACCCCGGGACTAACACCCTTCGATGCCAAATG
CTACGGGGAGGAGCCGGCATATATCATTTTCCAGATGGACACCGGCAAAC
GCAGGAGAATCTCCTCGATCACGGGAATCCACCAGGGTGACGGACTGGGA
CCCGCCCTCTTCTGCATGCCCGTGGGACCGATCTTGCGCAAGTGCTGA
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