mRNA_H-paniculata_contig275.7526.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig275.7526.1
Unique NamemRNA_H-paniculata_contig275.7526.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: A0A6H5JZG8_9PHAE (Hflx-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZG8_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 3.230e-87
Identity = 192/384 (50.00%), Postives = 236/384 (61.46%), Query Frame = 1
Query:    4 VELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGG---KGGGGSGXXXXRSGGVRGK---GA---------VHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASEVPTLVVWNKVDKEQDCEK-----------------------GEEEVDDSSSNISCMGEDSSISGESSDGTMRRRSAPDARR--HDTGAAAADAADNGDDTIRVSAATGDGLKGLLGRVDALLHLRGNA-------RLTPPPYERFRYVQTLPGQ 1014
            VELA LKY+AAHLV+    G  SG+DRQGGG G MGG+GEKA++ QR+ LR+RTAEV + L +VE+RR  QR +RDRR E +VALVGYTNVGKSSL+N+L+LG    +G GG G      G  RG+   GA         V +++RVFDTLDPT RS+TLPS  RCVLVDTVGFIQDLPT L+HSF++TL+EVK ADVLLHVRDAS  P+V EA R AV+ETL ELGA   PTL VWNKVDKE+  +                         +  + D +      G    + G + +G  R   A + R    D GA            IRVSAA+G GL  LL R+DA+LHL G A       R +  P +R+ YV+ LPGQ
Sbjct:  133 VELAMLKYKAAHLVK----GSGSGFDRQGGGIGTMGGSGEKAIDTQRQLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHNTRGVGGGGGNREGKGSERGRRFDGAXXXXXXXXMVQARNRVFDTLDPTVRSVTLPSRVRCVLVDTVGFIQDLPTDLVHSFKSTLEEVKSADVLLHVRDASVEPRVGEAHRKAVQETLAELGAGGRPTLEVWNKVDKERRVDPENRGAXXXXXXXXXXXXXXXXXXXDMSLPDEAKAEKANGR---MEGPAGEGGSRLSHAGEGRTGPDDEGA------------IRVSAASGQGLAHLLERIDAMLHLNGGADGEGSGRRFSIKPIDRYEYVRVLPGQ 497          
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: A0A177W1F2_9GAMM (GTPase HflX n=8 Tax=Piscirickettsiaceae TaxID=135616 RepID=A0A177W1F2_9GAMM)

HSP 1 Score: 166 bits (419), Expect = 5.050e-44
Identity = 101/227 (44.49%), Postives = 132/227 (58.15%), Query Frame = 1
Query:    1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASEVPTLVVWNKVD 681
            QVEL QL++QA  LVQ     +   YD+Q GG G  GGAGE  LE+ RR LR R   + K L  +   RA+ R+ R R ++PT+ALVGYTN GKS+L N LS                       + ++ DR+F TLDPT R   +P     VL DTVGFIQ LP  LI +FRATL+E  +AD+LLHV D +S   +   ++  V E L E+GA  +P ++V+NKVD
Sbjct:  124 QVELTQLQHQATRLVQ-----KSGHYDQQRGGIGVRGGAGETGLEVDRRVLRQRITTLKKRLVHIRDSRALGRQRRQRSQQPTIALVGYTNAGKSTLFNALS---------------------DSSAYADDRLFATLDPTLRRAVIPGFGDVVLADTVGFIQHLPPQLIDAFRATLEETAQADLLLHVIDGASEESLLRIEQ--VNEVLAEIGAEHIPQILVFNKVD 322          
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: UPI001C4A161E (GTPase HflX n=1 Tax=Sphingomicrobium sp. B8 TaxID=2851013 RepID=UPI001C4A161E)

HSP 1 Score: 166 bits (419), Expect = 5.260e-44
Identity = 106/230 (46.09%), Postives = 138/230 (60.00%), Query Frame = 1
Query:    1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGAS---EVPTLVVWNKVD 681
            QVELA L YQA  LV++      +  +RQ GG G +GG GE  +E  RR +RDR A++ K L +V+K RA+ R  R R   P VALVGYTN GKS+L NRL+                     +  V ++D +F TLDPT R I +P   + +L DTVGF+ DLPT L+ +FRATL+EV  AD++LHVRD +   + SEAQR  VE+ L+ELG       P L VWNK+D
Sbjct:  132 QVELAHLDYQAGRLVRTW-----THLERQRGGFGFLGGPGETQIEADRRMIRDRMAKIRKELEQVKKTRALHRERRQRAPWPVVALVGYTNAGKSTLFNRLA---------------------RAEVMAKDLLFATLDPTMRQIRVPGHDKVILSDTVGFVSDLPTQLVAAFRATLEEVASADLILHVRDIAH--EDSEAQRADVEQVLKELGLEGEGAPPQLEVWNKLD 333          
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: A0A7T2GLS4_9SPHN (GTPase HflX n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A7T2GLS4_9SPHN)

HSP 1 Score: 165 bits (417), Expect = 1.110e-43
Identity = 109/244 (44.67%), Postives = 143/244 (58.61%), Query Frame = 1
Query:    1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASE---VPTLVVWNKVDK--EQDCEKGEEEV 717
            QVELA L YQA  LV+S      +  +RQ GG G +GG GE  +E  RRQ+RDR A++ K L +V + R + R  R R   P +ALVGYTN GKS+L NRL+                     +  V +++ +F TLDPT R I LP + + +L DTVGFI DLPT L+ +FRATL+EV  AD+++HVRD S     SEAQR  VE+ L E+GA+     P L  WNK+D   EQ+  +  EE 
Sbjct:  133 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIEADRRQIRDRMAKLRKELEQVTRTRTLHRARRQRAPWPIIALVGYTNAGKSTLFNRLT---------------------RADVMAENLLFATLDPTMREIGLPGIDKTILSDTVGFISDLPTQLVAAFRATLEEVISADLIIHVRDISHPD--SEAQRQDVEDVLEEIGAAGEEGAPILEAWNKIDSLDEQEASRVREEA 348          
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: UPI0015A40394 (GTPase HflX n=1 Tax=Parasphingopyxis sp. CP4 TaxID=2724527 RepID=UPI0015A40394)

HSP 1 Score: 164 bits (416), Expect = 1.590e-43
Identity = 102/230 (44.35%), Postives = 137/230 (59.57%), Query Frame = 1
Query:    1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGAS---EVPTLVVWNKVD 681
            QVELA L YQA  LV+S      +  +RQ GG G +GG GE  +E  RR +RDR A++ K L +V + R + R  R +   P +ALVGYTN GKS+L N+++                      G V + D +F TLDPT R I LP L + +L DTVGF+ DLPT L+ +FRATL+EV  AD+++HVRD +     S+AQRL VE+ L E+GA    +VP +  WNK+D
Sbjct:  133 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIEADRRMIRDRMAKLRKELEQVRRTRTLHRSRRQKAPWPVIALVGYTNAGKSTLFNQMT---------------------GGDVMAADLLFATLDPTMREIALPGLDKAILSDTVGFVSDLPTQLVAAFRATLEEVNAADLIVHVRDIAHPD--SDAQRLDVEQVLAEIGAGGEGDVPMIEAWNKID 334          
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: R5AP53_9CLOT (GTPase HflX n=1 Tax=Clostridium sp. CAG:1024 TaxID=1262770 RepID=R5AP53_9CLOT)

HSP 1 Score: 161 bits (408), Expect = 2.580e-43
Identity = 107/229 (46.72%), Postives = 139/229 (60.70%), Query Frame = 1
Query:    1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGA-VHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASEVPTLVVWNKVDK 684
            QVELAQLKY+   L+  G A       RQGG    M G GEK LEI RR++R R  E+ + L E+EK+RA++R  R +   P VALVGYTN GKS+LLN LS                      GA V ++D++F TLDP  R ITLP+   C+L DTVGFI  LP  L+ +FR+TL+EV+ AD+LLHV D+SS     + Q   VEE +  LGA++ P + V+NK+DK
Sbjct:   46 QVELAQLKYRLPRLLGMGRA-----LSRQGGSGVGMRGPGEKKLEIDRRRIRRRIFELQQELDEIEKQRALRRVKRGKNAVPVVALVGYTNAGKSTLLNALS----------------------GANVLAEDQLFATLDPVVRRITLPNGTECLLSDTVGFINKLPHDLVQAFRSTLEEVRDADLLLHVIDSSSP--YYDVQMRVVEEVVSSLGAADTPCIQVFNKIDK 245          
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: A0A520JCT0_SPHSX (GTPase HflX (Fragment) n=1 Tax=Sphingomonas sp. TaxID=28214 RepID=A0A520JCT0_SPHSX)

HSP 1 Score: 161 bits (408), Expect = 3.050e-43
Identity = 106/238 (44.54%), Postives = 139/238 (58.40%), Query Frame = 1
Query:    1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGA-VHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASEV-PTLVVWNKVDKEQDCEKGE 708
            QVELA L YQA  LV+S      +  +RQ GG G +GG GE  +E  RR +RDR A++ K L +V + R + R  R R   P +ALVGYTN GKS+L NRL+                      GA V ++D +F TLDPT R I LP + + +L DTVGF+ DLPT L+ +F+ATL+EV  AD+L+HVRD +     +EAQR  VE  L E+G  E  P   VWNK+D   D ++ E
Sbjct:   44 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIEADRRLIRDRMAKLKKELEQVSRTRGLHRERRQRAPWPVIALVGYTNAGKSTLFNRLT----------------------GADVMAEDLLFATLDPTLRQIQLPGIDKAILSDTVGFVSDLPTQLVAAFKATLEEVVSADLLVHVRDIAHPD--TEAQRADVEAVLAEIGVDETTPRFEVWNKLDLLDDADREE 252          
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: A0A127MEW1_9SPHN (GTPase HflX n=5 Tax=Sphingomonadales TaxID=204457 RepID=A0A127MEW1_9SPHN)

HSP 1 Score: 163 bits (413), Expect = 4.080e-43
Identity = 106/234 (45.30%), Postives = 136/234 (58.12%), Query Frame = 1
Query:    1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGA-VHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASEV-----PTLVVWNKVDK 684
            QVELA L YQA  LV+S      +  +RQ GG G +GG GE  +E  RR +RDR A++ K LA + K RA+ R  R R   P +ALVGYTN GKS+L NRL+                      GA V ++D +F TLDPT R   LP   + +L DTVGF+ DLPT L+ +FRATL+EV  AD+++HVRD S   + S+AQ   V + L ELG SE      P +  WNK+DK
Sbjct:  131 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIESDRRMIRDRMAKLRKDLAHLRKTRALHRERRQRAPWPVIALVGYTNAGKSTLFNRLT----------------------GADVFAEDLLFATLDPTMREFPLPGYDKAILSDTVGFVSDLPTQLVAAFRATLEEVSAADIVVHVRDISH--EASDAQARDVRQILAELGVSEEAGEGPPVIEAWNKIDK 335          
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: UPI00101B9E8A (GTPase HflX n=1 Tax=Sphingosinicella sp. CPCC 101087 TaxID=2497754 RepID=UPI00101B9E8A)

HSP 1 Score: 163 bits (413), Expect = 4.330e-43
Identity = 105/231 (45.45%), Postives = 138/231 (59.74%), Query Frame = 1
Query:    1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASE---VPTLVVWNKVDK 684
            QVELA L YQA  LV+S      +  +RQ GG G +GG GE  +E  RR +RDR A++ + L +V + RA+ R  R R   P VALVGYTN GKS+L NRL+                     +  V ++D +F TLDPT R I LP L + +L DTVGFI DLPT L+ +FRATL+EV  AD+++HVRD S     SEAQ+  VE+ L E+GA+     P +  WNK+D+
Sbjct:  132 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIEADRRLIRDRMAKLRRELEQVSRTRALHRSRRQRAPWPVVALVGYTNAGKSTLFNRLT---------------------RAEVLAEDLLFATLDPTMREIGLPGLDKAILSDTVGFISDLPTQLVAAFRATLEEVVSADLIVHVRDISHPD--SEAQQGDVEQVLEEIGAAGEIGAPMIEAWNKIDR 334          
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: UPI001FD65D84 (GTPase HflX n=1 Tax=Sphingomicrobium aestuariivivum TaxID=1582356 RepID=UPI001FD65D84)

HSP 1 Score: 163 bits (412), Expect = 5.370e-43
Identity = 107/230 (46.52%), Postives = 134/230 (58.26%), Query Frame = 1
Query:    1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASE---VPTLVVWNKVD 681
            QVELA L YQA  LV+S      +  +RQ GG G +GG GE  +E  RR +RDR A + K L +V+K R + R  R R   P VALVGYTN GKS+L NRL+                     + +V ++D +F TLDPT RS+ LP   + +L DTVGF+ DLPT L+ +FRATL+EV  AD++LHVRD S     +EAQ   VE  L ELG  E    P L VWNK D
Sbjct:  132 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIEADRRMIRDRMARIRKELEQVKKTRGLHRDRRQRAPWPVVALVGYTNAGKSTLFNRLT---------------------EASVMAKDLLFATLDPTMRSVKLPGHEKVILSDTVGFVSDLPTQLVAAFRATLEEVASADLILHVRDISHPD--TEAQAEDVEGVLAELGLEEGKGPPRLEVWNKAD 333          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZG8_9PHAE3.230e-8750.00Hflx-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A177W1F2_9GAMM5.050e-4444.49GTPase HflX n=8 Tax=Piscirickettsiaceae TaxID=1356... [more]
UPI001C4A161E5.260e-4446.09GTPase HflX n=1 Tax=Sphingomicrobium sp. B8 TaxID=... [more]
A0A7T2GLS4_9SPHN1.110e-4344.67GTPase HflX n=2 Tax=Sphingomonadales TaxID=204457 ... [more]
UPI0015A403941.590e-4344.35GTPase HflX n=1 Tax=Parasphingopyxis sp. CP4 TaxID... [more]
R5AP53_9CLOT2.580e-4346.72GTPase HflX n=1 Tax=Clostridium sp. CAG:1024 TaxID... [more]
A0A520JCT0_SPHSX3.050e-4344.54GTPase HflX (Fragment) n=1 Tax=Sphingomonas sp. Ta... [more]
A0A127MEW1_9SPHN4.080e-4345.30GTPase HflX n=5 Tax=Sphingomonadales TaxID=204457 ... [more]
UPI00101B9E8A4.330e-4345.45GTPase HflX n=1 Tax=Sphingosinicella sp. CPCC 1010... [more]
UPI001FD65D845.370e-4346.52GTPase HflX n=1 Tax=Sphingomicrobium aestuariivivu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig275contigH-paniculata_contig275:41404..42987 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.4
Seed ortholog evalue2.7e-79
Seed eggNOG ortholog2880.D7FHX0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ribosome binding
EggNOG OGsCOG2262@1,KOG0410@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1020
Cds size1020
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig275.7526.1prot_H-paniculata_contig275.7526.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig275 41404..42987 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929831.0268252-CDS-H-paniculata_contig275:41403..416321622929831.0268252-CDS-H-paniculata_contig275:41403..41632Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig275 41404..41632 -
1691481030.1089416-CDS-H-paniculata_contig275:41403..416321691481030.1089416-CDS-H-paniculata_contig275:41403..41632Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig275 41404..41632 -
1622929831.042068-CDS-H-paniculata_contig275:41698..420371622929831.042068-CDS-H-paniculata_contig275:41698..42037Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig275 41699..42037 -
1691481030.122316-CDS-H-paniculata_contig275:41698..420371691481030.122316-CDS-H-paniculata_contig275:41698..42037Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig275 41699..42037 -
1622929831.0556388-CDS-H-paniculata_contig275:42535..429871622929831.0556388-CDS-H-paniculata_contig275:42535..42987Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig275 42536..42987 -
1691481030.12989-CDS-H-paniculata_contig275:42535..429871691481030.12989-CDS-H-paniculata_contig275:42535..42987Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig275 42536..42987 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig275.7526.1

>prot_H-paniculata_contig275.7526.1 ID=prot_H-paniculata_contig275.7526.1|Name=mRNA_H-paniculata_contig275.7526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=340bp
QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQ
LRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNR
LSLGGKGGGGSGAGKGRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLA
RCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEA
QRLAVEETLRELGASEVPTLVVWNKVDKEQDCEKGEEEVDDSSSNISCMG
EDSSISGESSDGTMRRRSAPDARRHDTGAAAADAADNGDDTIRVSAATGD
GLKGLLGRVDALLHLRGNARLTPPPYERFRYVQTLPGQL*
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mRNA from alignment at H-paniculata_contig275:41404..42987-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig275.7526.1 ID=mRNA_H-paniculata_contig275.7526.1|Name=mRNA_H-paniculata_contig275.7526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig275:41404..42987- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTGGAATTGGCCCAGTTGAAGTACCAGGCAGCGCACTTGGTACAGTC GGGCGCCGCAGGTCGCGACAGCGGCTACGATCGGCAGGGCGGTGGCACCG GAGCCATGGGTGGCGCCGGAGAAAAGGCCCTCGAGATCCAGCGGCGGCAG TTGCGTGACCGCACCGCGGAGGTCGGCAAGCTCTTGGCCGAGGTGGAGAA ACGTCGGGCTGTGCAGAGGAGGACGAGGGACCGACGACGAGAACCGACAG TGGCGCTCGTTGGTTACACGAACGTGGGCAAGTCATCGTTGTTGAATCGG CTGTCTCTTGGGGGCAAGGGCGGGGGCGGGAGCGGTGCGGGGAAGGGGAG ATCCGGGGGCGTGCGAGGCAAGGGCGCTGTCCACTCCCAGGATCGAGTGT TCGATACACTGGACCCGACCAGTCGGTCTATCACGCTGCCTTCTCTTGCG AGGTGGGTTCGATTCCGGTCCGGTGCAGTCCGGTTGGGTTCGTTCAGTTC CGTGTGTGAGGGAGAGATAGAGCGGTTGTTGCGTTGCACTGCGTTGCACT GCGTTGCACTGCGTTGCGCTGCGTTGCACTGCGTAAGCTACACTGTATTG CACCGTCCAGTACATGCGTTGTTCTATTATGGTGAGGGTTCGGGTAGAGC GGGGGGGTGAGAGAGTCCGCGAGGGAGCGGGCGGGGGGGCTGTTGAAGTC AGGCCACAGAAATTGTAGACAGGTGAACCACGGAGGTTCAATCGCATCTT ACGTGCTTCGGAGATGAATGTTCATCATATACCTGATGATTTTGTGTTTG ATATTCATGGATTTTCATCTGCTGTCTTGTGAAGTGTTTGCTGTGCTAAT GTAAAGCTTAGTTCCCCCTCTTGCAATGACTTGCTATTCAGTACGTTCTA CGCCCGCCTAAATATTTACCTGGATACGATGAACAAACAAAACAAATCAG GTGCGTGCTGGTGGACACCGTAGGCTTCATCCAGGATCTTCCGACGGCAC TGATACACTCGTTCCGGGCAACTCTCGACGAGGTAAAACGCGCGGACGTG CTCTTGCATGTGCGCGACGCGAGCTCTACCCCTCAGGTCTCGGAGGCGCA GCGCCTGGCTGTAGAGGAAACCCTTCGCGAGCTCGGCGCCTCGGAGGTAC CCACCCTCGTGGTGTGGAACAAGGTCGACAAGGAGCAAGACTGCGAGAAA GGAGAAGAGGAAGTCGACGACAGCAGTAGCAATATTAGTTGTATGGGAGA AGATTCCAGTATTTCTGGTGAGTCCTCCGACGGTACCATGTTGCCTTTGA CGGCAACGAACTCCGCCGCTATCGCGAACGTGACGAGCATGAAACCTCGT GAAAGGCGTCGAAGGTCGGCGCCGGACGCGAGGCGACACGATACGGGTGC TGCTGCTGCTGATGCTGCTGACAATGGTGATGATACCATTCGAGTGTCGG CCGCAACGGGTGACGGGTTGAAGGGGCTGCTGGGGCGTGTGGACGCCTTG TTGCACCTCAGGGGCAATGCGAGGCTTACTCCTCCACCCTACGAGCGTTT CCGATACGTTCAGACTCTCCCTGGACAGTTATAG
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Coding sequence (CDS) from alignment at H-paniculata_contig275:41404..42987-

>mRNA_H-paniculata_contig275.7526.1 ID=mRNA_H-paniculata_contig275.7526.1|Name=mRNA_H-paniculata_contig275.7526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2040bp|location=Sequence derived from alignment at H-paniculata_contig275:41404..42987- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTGGAATTGGCCCAGTTGAAGTACCAGGCAGCGCACTTGGTACAGTC
GGGCGCCGCAGGTCGCGACAGCGGCTACGATCGGCAGGGCGGTGGCACCG
GAGCCATGGGTGGCGCCGGAGAAAAGGCCCTCGAGATCCAGCGGCGGCAG
TTGCGTGACCGCACCGCGGAGGTCGGCAAGCTCTTGGCCGAGGTGGAGAA
ACGTCGGGCTGTGCAGAGGAGGACGAGGGACCGACGACGAGAACCGACAG
TGGCGCTCGTTGGTTACACGAACGTGGGCAAGTCATCGTTGTTGAATCGG
CTGTCTCTTGGGGGCAAGGGCGGGGGCGGGAGCGGTGCGGGGAAGGGGAG
ATCCGGGGGCGTGCGAGGCAAGGGCGCTGTCCACTCCCAGGATCGAGTGT
TCGATACACTGGACCCGACCAGTCGGTCTATCACGCTGCCTTCTCTTGCG
AGCAGGTGGAATTGGCCCAGTTGAAGTACCAGGCAGCGCACTTGGTACAG
TCGGGCGCCGCAGGTCGCGACAGCGGCTACGATCGGCAGGGCGGTGGCAC
CGGAGCCATGGGTGGCGCCGGAGAAAAGGCCCTCGAGATCCAGCGGCGGC
AGTTGCGTGACCGCACCGCGGAGGTCGGCAAGCTCTTGGCCGAGGTGGAG
AAACGTCGGGCTGTGCAGAGGAGGACGAGGGACCGACGACGAGAACCGAC
AGTGGCGCTCGTTGGTTACACGAACGTGGGCAAGTCATCGTTGTTGAATC
GGCTGTCTCTTGGGGGCAAGGGCGGGGGCGGGAGCGGTGCGGGGAAGGGG
AGATCCGGGGGCGTGCGAGGCAAGGGCGCTGTCCACTCCCAGGATCGAGT
GTTCGATACACTGGACCCGACCAGTCGGTCTATCACGCTGCCTTCTCTTG
CGAGGTGCGTGCTGGTGGACACCGTAGGCTTCATCCAGGATCTTCCGACG
GCACTGATACACTCGTTCCGGGCAACTCTCGACGAGGTAAAACGCGCGGA
CGTGCTCTTGCATGTGCGCGACGCGAGCTCTACCCCTCAGGTCTCGGAGG
CGCAGCGCCTGGCTGTAGAGGAAACCCTTCGCGAGCTCGGCGCCTCGGAG
GTACCCACCCTCGTGGTGTGGAACAAGGTCGACAAGGAGCAAGACTGCGA
GAAAGGAGAAGAGGAAGTCGACGACAGCAGTAGCAATATTAGTTGTATGG
GAGAAGATTCCAGTATTTCTGGTGAGTCCTCCGACGGTACCATGTGCGTG
CTGGTGGACACCGTAGGCTTCATCCAGGATCTTCCGACGGCACTGATACA
CTCGTTCCGGGCAACTCTCGACGAGGTAAAACGCGCGGACGTGCTCTTGC
ATGTGCGCGACGCGAGCTCTACCCCTCAGGTCTCGGAGGCGCAGCGCCTG
GCTGTAGAGGAAACCCTTCGCGAGCTCGGCGCCTCGGAGGTACCCACCCT
CGTGGTGTGGAACAAGGTCGACAAGGAGCAAGACTGCGAGAAAGGAGAAG
AGGAAGTCGACGACAGCAGTAGCAATATTAGTTGTATGGGAGAAGATTCC
AGTATTTCTGGTGAGTCCTCCGACGGTACCATGCGTCGAAGGTCGGCGCC
GGACGCGAGGCGACACGATACGGGTGCTGCTGCTGCTGATGCTGCTGACA
ATGGTGATGATACCATTCGAGTGTCGGCCGCAACGGGTGACGGGTTGAAG
GGGCTGCTGGGGCGTGTGGACGCCTTGTTGCACCTCAGGGGCAATGCGAG
GCTTACTCCTCCACCCTACGAGCGTTTCCGATACGTTCAGACTCTCCCTG
GACAGTTATAGGCGTCGAAGGTCGGCGCCGGACGCGAGGCGACACGATAC
GGGTGCTGCTGCTGCTGATGCTGCTGACAATGGTGATGATACCATTCGAG
TGTCGGCCGCAACGGGTGACGGGTTGAAGGGGCTGCTGGGGCGTGTGGAC
GCCTTGTTGCACCTCAGGGGCAATGCGAGGCTTACTCCTCCACCCTACGA
GCGTTTCCGATACGTTCAGACTCTCCCTGGACAGTTATAG
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