prot_H-paniculata_contig275.7524.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig275.7524.1
Unique Nameprot_H-paniculata_contig275.7524.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 6.550e-26
Identity = 56/110 (50.91%), Postives = 70/110 (63.64%), Query Frame = 0
Query:    1 VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKVYSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEFA-VVKPLWDMLDEFL 109
            VDD+  W  +  +L+ +L ++LDRL+   +YVA  K   F   + WCGKVYS     HDPER+ GLATMR PET GEL  FLQAVN +RT LP  A VV PL   L++ L
Sbjct:  910 VDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHL 1019          
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Match: A0A2P4Y094_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y094_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.030e-14
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 0
Query:    1 VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKVYSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEF-AVVKPLWDMLDEFLK 110
            +DDI  +  +  EL+Q L  VL R +A  + +   K   F  E++WCGK+ S A   H P+R+QGL  M+ P+T G+L  FL AVN MR  +PE+  +   L  +L+E +K
Sbjct:  784 LDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVCHCPDRVQGLVEMQPPQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLHAVLEEAMK 894          
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Match: A0A6A3VHD7_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VHD7_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.710e-14
Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = 0
Query:    1 VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKVYSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEF-AVVKPLWDMLDEFLKN 111
            +DDI  +  +  EL+Q L  VL R +A  + +   K   F  E++WCGK+ S A   H P+R QGL  M+ P+T G+L  FL A+N MR  +PE+  +   L+ +L+E +K 
Sbjct:  102 LDDILGYAESEDELLQLLDQVLVRCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTSGLYAVLEEAMKT 213          
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Match: A0A6G0JR09_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0JR09_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.450e-14
Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = 0
Query:    1 VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKVYSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEF-AVVKPLWDMLDEFLKN 111
            +DDI  +  +  EL+Q L  VL R +A  + +   K   F  E++WCGK+ S A   H P+R QGL  M+ P+T G+L  FL A+N MR  +PE+  +   L+ +L+E +K 
Sbjct:  102 LDDILGYAESEDELLQLLDQVLVRCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTAGLYAVLEEAMKT 213          
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Match: A0A6G0MLJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MLJ8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.560e-14
Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 0
Query:    1 VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKVYSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEF-AVVKPLWDMLDEFLK 110
            +DDI  +  +  EL+Q L  VL R +A  + +   K   F  E++WCGK+ S A   H P+R QGL  M+ P+T G+L  FL A+N MR  +PE+  +   L+ +L+E +K
Sbjct:  520 LDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTAGLYAVLEEAMK 630          
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Match: H3H555_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H555_PHYRM)

HSP 1 Score: 77.4 bits (189), Expect = 3.480e-14
Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    1 VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKVYSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEFA-VVKPLWDMLD 106
            +DDI  +  +   L++ L  VL+R +   + +   K   F  E++WCG++ S     H PER+QGL  M+ P+T G+L  FL AVN MR  +PEF  +   L+D LD
Sbjct:  102 LDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMISAQGVRHCPERIQGLVEMQAPQTAGDLQQFLCAVNWMRQSIPEFTRITAVLYDALD 208          
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM)

HSP 1 Score: 77.4 bits (189), Expect = 3.580e-14
Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    1 VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKVYSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEFA-VVKPLWDMLD 106
            +DDI  +  +   L++ L  VL+R +   + +   K   F  E++WCG++ S     H PER+QGL  M+ P+T G+L  FL AVN MR  +PEF  +   L+D LD
Sbjct:  830 LDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMISAQGVRHCPERIQGLVEMQAPQTAGDLQQFLCAVNWMRQSIPEFTRITAVLYDALD 936          
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Match: H3H656_PHYRM (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H656_PHYRM)

HSP 1 Score: 77.0 bits (188), Expect = 4.750e-14
Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    1 VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKVYSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEFA-VVKPLWDMLD 106
            +DDI  +  +   L++ L  VL+R +   + +   K   F  E++WCG++ S     H PER+QGL  M+ P+T G+L  FL AVN MR  +PEF  +   L+D LD
Sbjct:  828 LDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMTSAQGVRHCPERIQGLVEMQAPQTAGDLQQFLCAVNWMRQSIPEFTRITAVLYDALD 934          
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Match: A0A6A3Q7S3_9STRA (Uncharacterized protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q7S3_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.860e-14
Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 0
Query:    1 VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKVYSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEF-AVVKPLWDMLDEFLK 110
            +DDI  +  +  EL+Q L  VL R +A  + +   K   F  +++WCGK+ S A   H P+R QGL  M+ P+T G+L  FL A+N MR  +PE+  +   L+ +L+E +K
Sbjct:  655 LDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIDVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTSGLYAVLEEAMK 765          
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Match: A0A6A3GI80_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GI80_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 8.470e-14
Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 0
Query:    1 VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKVYSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEF 95
            +DDI  +  +  EL+Q L  VL R +A  + +   K   F  E++WCGK+ S A   H P+R QGL  M+ P+T G+L  FL A+N MR  +PE+
Sbjct:  202 LDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEY 296          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig275.7524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE6.550e-2650.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4Y094_9STRA1.030e-1439.64Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6A3VHD7_9STRA1.710e-1438.39Reverse transcriptase domain-containing protein n=... [more]
A0A6G0JR09_9STRA2.450e-1438.39Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6G0MLJ8_9STRA2.560e-1438.74Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
H3H555_PHYRM3.480e-1438.32Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H4S7_PHYRM3.580e-1438.32Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H656_PHYRM4.750e-1438.32Reverse transcriptase domain-containing protein n=... [more]
A0A6A3Q7S3_9STRA4.860e-1437.84Uncharacterized protein n=6 Tax=Phytophthora fraga... [more]
A0A6A3GI80_9STRA8.470e-1441.05Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 1..54
e-value: 1.4E-6
score: 30.1
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig275contigH-paniculata_contig275:2608..2958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig275.7524.1mRNA_H-paniculata_contig275.7524.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig275 2608..2958 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig275.7524.1 ID=prot_H-paniculata_contig275.7524.1|Name=mRNA_H-paniculata_contig275.7524.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
VDDIGIWTRNWQELMQSLRIVLDRLKARSIYVAVDKVPLFRREMRWCGKV
YSVATASHDPERMQGLATMRWPETVGELNPFLQAVNLMRTGLPEFAVVKP
LWDMLDEFLKNKRQTWR
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