mRNA_H-paniculata_contig2749.7523.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig2749.7523.1
Unique Name	mRNA_H-paniculata_contig2749.7523.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Match: D7FV31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV31_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 7.230e-57
Identity = 127/304 (41.78%), Postives = 146/304 (48.03%), Query Frame = 1

Query:  133 LECFRYSDL---EKGADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGH----------------------RFANFPQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFA---------------------------------------HDPE-------------------------------------AVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQCDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYFPR 741
            LE FRY DL   ++  DL    ERAFG  GLGIVVVTGV  ++ +RRELF LGH                      RFA  P+ET+   EHP S F+FGWSHGKE LE G PD  KGS+YANPC DAPF                                        H PE                                      V+ YPSFAHPN+WPD    G    F+  FKALG+AVVRVG LVARQCDRYV +VH           GY+ GK+ R+VST+RC KGRLL+YFPR
Sbjct:    3 LEYFRYEDLVRDDEAGDLHAVAERAFGHQGLGIVVVTGVPDVAGARRELFALGHKPLTSHPYKAGTEHAGFSPDQKRFAALPEETKVRYEHPQSSFSFGWSHGKESLETGRPDLAKGSFYANPCFDAPFGGDGGXXXXXXXXXXXXXXXXXXXXXXXXXVDCRSPDHLLHRPENGNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALVEKYPSFAHPNVWPDADVAG----FSAAFKALGRAVVRVGGLVARQCDRYVATVHP----------GYDKGKMSRIVSTSRCPKGRLLYYFPR 292

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BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Match: A0A835Z9V9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V9_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.940e-53
Identity = 98/200 (49.00%), Postives = 122/200 (61.00%), Query Frame = 1

Query:  139 CFRYSDLEKGADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGHRFANFPQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFAHDPEAVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQCDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYFP 738
            C +Y+DL+ GADL   +E+A+G++GLGI+ VTGV  +   R +L  L    A  P E +A  EHP S + FGWS GKE L  GTPDF+KGSYYANP +D P   D   +  +P+  HPNIWP  H    + +    FK LGQ V+ VGVLVARQCD Y            R   GY  G LER+V+ +RC KGRLLHYFP
Sbjct:   16 CVKYTDLQSGADLCSAIEQAYGNEGLGILAVTGVPNLQVLRAKLLPLAKTLAELPAEVQAELEHPSSSYMFGWSLGKERLSSGTPDFSKGSYYANPVYDRP-VDDESQIAQFPASIHPNIWPTKH----LPDLEPAFKVLGQLVIAVGVLVARQCDAYAA----------RARPGYSGG-LERMVAASRCAKGRLLHYFP 199

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BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Match: A0A7S4BCQ1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BCQ1_CHRCT)

HSP 1 Score: 182 bits (461), Expect = 1.880e-52
Identity = 103/224 (45.98%), Postives = 132/224 (58.93%), Query Frame = 1

Query:  127 AELECFRYSDLEKGADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGHRFANFPQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFAHDPEAVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQCDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYFPRVQDKQQAGTAMAATEEAAD 798
            A++   +Y DL  G+DL   +ERAFG DG+GI+ V GV GISD+R  L  L HRFA  P++T+A  EH GS +  GWS G+E L+ G PD +KGSYYANP  D PF  D   + A+P+FA PNIWP +     +      F   GQ + RVG LVA QCD +V +              Y A +L+ V+ T+RC KGRLLHYFP       AG   AA+ EA+D
Sbjct:   12 ADIVVLQYEDLLAGSDLTAEIERAFGYDGMGILTVAGVPGISDARDRLLPLAHRFAMLPEKTKAKYEHAGSFYAVGWSFGREKLQ-GRPDVSKGSYYANPLQDKPF-DDAATIAAHPAFAEPNIWPSEE----LPALRGAFMEAGQLMHRVGCLVAAQCDAFVRA----------RCDAYPADRLQHVIKTSRCCKGRLLHYFPI----DTAGRECAASHEASD 215

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BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Match: A0A7S4EZ27_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZ27_CHRCT)

HSP 1 Score: 182 bits (461), Expect = 2.490e-51
Identity = 103/224 (45.98%), Postives = 132/224 (58.93%), Query Frame = 1

Query:  127 AELECFRYSDLEKGADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGHRFANFPQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFAHDPEAVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQCDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYFPRVQDKQQAGTAMAATEEAAD 798
            A++   +Y DL  G+DL   +ERAFG DG+GI+ V GV GISD+R  L  L HRFA  P++T+A  EH GS +  GWS G+E L+ G PD +KGSYYANP  D PF  D   + A+P+FA PNIWP +     +      F   GQ + RVG LVA QCD +V +              Y A +L+ V+ T+RC KGRLLHYFP       AG   AA+ EA+D
Sbjct:   12 ADIVVLQYEDLLAGSDLTAEIERAFGYDGMGILTVAGVPGISDARDRLLPLAHRFAMLPEKTKAKYEHAGSFYAVGWSFGREKLQ-GRPDVSKGSYYANPLQDKPF-DDAATIAAHPAFAEPNIWPSEE----LPALRGAFMEAGQLMHRVGCLVAAQCDAFVRA----------RCDAYPADRLQHVIKTSRCCKGRLLHYFPI----DTAGRECAASHEASD 215

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BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Match: A0A7S2G9H5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G9H5_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.300e-49
Identity = 94/199 (47.24%), Postives = 118/199 (59.30%), Query Frame = 1

Query:  139 CFRYSDLEKGADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGHRFANFPQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFAHDPEAVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQCDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYF 735
            C  Y DL+ G DL   +E AF  DGLGI+ V+ +  +S  R  L  L  RFA  P E + S EHP S + FGWSHG+E L+ G PD  KGSYYANP +D P   D   ++ YP+F HPNIWP +     + E    FKALGQ +V VG+LVA+QCD ++ES  S           YE GKL   ++T+ C K RLLHYF
Sbjct:   36 CLSYKDLKSGVDLTSQIEEAFSSDGLGILTVSDIPHLSVCRSRLLPLARRFAMLPGEVKESFEHPESFYAFGWSHGREKLQ-GKPDLAKGSYYANPQYDRP-VDDESLIQQYPAFIHPNIWPTEE----VPELEDAFKALGQLIVHVGLLVAQQCDAFIESRCST----------YENGKLHEAIATSLCCKARLLHYF 218

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BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Match: L8HGG8_ACACA (DIOX_N domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGG8_ACACA)

HSP 1 Score: 176 bits (446), Expect = 8.900e-49
Identity = 96/198 (48.48%), Postives = 123/198 (62.12%), Query Frame = 1

Query:  148 YSDLEK-GADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGHRFANFPQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFAHDPEAVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQCDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYFP 738
            YSDLE+   DL   +E A+G +GLGI+ V GV      R EL  L H+FA  P+E +   EH  S ++FGWSHGKE+LE G PDF+KGSYY NP +D PF  D E +K YPSF HPNIWP+      M EF   F  +G+ +V VG+L+A+QCD +V+          +    +E GKLER+V  +R  KGR LHYFP
Sbjct:   24 YSDLEQPNVDLSAAIEEAYGFNGLGILAVRGVPNFMQLRGELLPLIHKFATQPEEVKKKTEHLESSYSFGWSHGKEVLE-GKPDFSKGSYYNNPVYDRPF-DDEELIKKYPSFCHPNIWPEG-----MPEFRDGFMNMGKLLVDVGLLIAKQCDIFVK----------KQCPAFEEGKLERIVRESRTAKGRALHYFP 204

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BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Match: A0A452ZUJ0_AEGTS (DIOX_N domain-containing protein n=3 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZUJ0_AEGTS)

HSP 1 Score: 171 bits (434), Expect = 1.150e-48
Identity = 92/199 (46.23%), Postives = 118/199 (59.30%), Query Frame = 1

Query:  148 YSDL-EKGADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGHRFANFPQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFAHDPEAVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQCDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYFPR 741
            ++DL E+G DL   +E   G DGLGI+ ++GV      RR L  L  + AN P++ +   E P S +NFGWSHGKE LE G  D  KGSYYANP  D P A D   V  YPS+  PNIWP DH    + E    FKALG+ ++ VG+++AR CD YV   H +          Y+   LE+ +S +RCHKGRLL+YFPR
Sbjct:   50 FADLKERGRDLSGKIEEGLGPDGLGIISISGVPDFPALRRTLLHLAPKVANLPEDVKKELEDPDSRYNFGWSHGKEKLESGKLDTFKGSYYANPILDVPTADD-VLVSRYPSYCRPNIWPADH----LPELEIAFKALGKLMLEVGLMLARHCDLYVMQ-HGV--------EPYDGESLEQTISRSRCHKGRLLYYFPR 234

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BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Match: G4Z7V2_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z7V2_PHYSP)

HSP 1 Score: 175 bits (444), Expect = 1.290e-48
Identity = 99/227 (43.61%), Postives = 130/227 (57.27%), Query Frame = 1

Query:  109 YSMVNKAELECFRYSDLEKGADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGHRFANFPQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFAHDPEAVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQCDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYFPRVQDKQQAGTAMAATEE 789
            +S V   ++    Y DL    DL   VE AFG +G+GI+VV+GV  +S  R +L  L   FAN P++ +A CE P + ++FGWSHGKE L+ G PD+ KGSYY NP  +     D + +  +PSF HPNIWP +     + E    F  LGQ +V  GVLVA QCD+ VES             GYE GKL R++ST +C K RLLHYF  + ++Q A    A T E
Sbjct:    5 HSAVEARDVPVVAYEDLVAKKDLSAVVEEAFGYEGMGILVVSGVPELSAKRSDLLPLAFAFANLPEDAKAKCELPEAFYSFGWSHGKENLQ-GKPDYAKGSYYNNPEVNDLAKGDQQLIHKFPSFFHPNIWPKE-----LPELEAAFMKLGQLIVDTGVLVAHQCDKLVES----------KCPGYEKGKLHRIISTGKCSKARLLHYFA-LSEEQIAAQNEATTLE 214

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BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Match: A0A5D6XP96_9STRA (DIOX_N domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP96_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.720e-48
Identity = 96/224 (42.86%), Postives = 127/224 (56.70%), Query Frame = 1

Query:  118 VNKAELECFRYSDLEKGADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGHRFANFPQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFAHDPEAVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQCDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYFPRVQDKQQAGTAMAATEE 789
            V   ++    Y DL   ADL   +E AFG DG+GI+ V+GV G++  R  L  L  +FAN P   +  C    ++++FGWSHGKE L+ G PDF+KGSYY NP  + P A D E ++ +PSF HPNIWP +     +    + F  LGQ +V  GVLVA QCD+ VE+              YE GKL R++ST +C K RLLHYF  + D+  A    A T E
Sbjct:    8 VESCDVPVVSYEDLVARADLSAAIEEAFGYDGMGILAVSGVPGLNPKRETLLPLAFQFANMPDAVKDRCTLEKAYYSFGWSHGKENLQ-GKPDFSKGSYYNNPETNDPTAGDAELIERFPSFFHPNIWPTEE----LPALESAFMDLGQLIVDTGVLVAHQCDKLVEA----------KSPAYERGKLHRIISTVKCSKARLLHYFA-LSDEAIAAQQQATTLE 215

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BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Match: D0NA95_PHYIT (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0NA95_PHYIT)

HSP 1 Score: 174 bits (442), Expect = 2.370e-48
Identity = 95/227 (41.85%), Postives = 131/227 (57.71%), Query Frame = 1

Query:  109 YSMVNKAELECFRYSDLEKGADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGHRFANFPQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFAHDPEAVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQCDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYFPRVQDKQQAGTAMAATEE 789
            +S V   ++    + DL    DL   +E AFG +G+GI+VV+GV  +S  R +L  L  +FANF  + +A CE PG+ ++FGWSHGKE L+ G PD+ KGSYY NP  +     D + +  +PSF HPNIWP++     + E    F  LGQ +V  G+LVA QCD  VE          +   GYE GKL R++ST +C K RLLHY+  + ++Q A    A T E
Sbjct:    5 HSSVEARDVPVVAFEDLVAKKDLSTVIEEAFGYEGMGILVVSGVPELSSKRSDLLPLAFKFANFSDDVKAKCELPGAFYSFGWSHGKENLQ-GKPDYAKGSYYNNPETNDLTGGDKQLIAKFPSFYHPNIWPNE-----LPELEKAFMKLGQLIVDTGMLVAHQCDNLVE----------KKCPGYEKGKLHRIISTGKCSKARLLHYYS-LSEEQIAAQKEATTLE 214

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2749.7523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FV31_ECTSI	7.230e-57	41.78	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835Z9V9_9STRA	3.940e-53	49.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S4BCQ1_CHRCT	1.880e-52	45.98	Hypothetical protein n=1 Tax=Chrysotila carterae T...	[more]
A0A7S4EZ27_CHRCT	2.490e-51	45.98	Hypothetical protein (Fragment) n=1 Tax=Chrysotila...	[more]
A0A7S2G9H5_9STRA	1.300e-49	47.24	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
L8HGG8_ACACA	8.900e-49	48.48	DIOX_N domain-containing protein n=1 Tax=Acanthamo...	[more]
A0A452ZUJ0_AEGTS	1.150e-48	46.23	DIOX_N domain-containing protein n=3 Tax=Aegilops ...	[more]
G4Z7V2_PHYSP	1.290e-48	43.61	Uncharacterized protein n=5 Tax=Phytophthora TaxID...	[more]
A0A5D6XP96_9STRA	1.720e-48	42.86	DIOX_N domain-containing protein n=1 Tax=Pythium b...	[more]
D0NA95_PHYIT	2.370e-48	41.85	Uncharacterized protein n=10 Tax=Phytophthora TaxI...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2749	contig	H-paniculata_contig2749:9078..15411 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	203.4
Seed ortholog evalue	1.6e-49
Seed eggNOG ortholog	2880.D7FV31
Hectar predicted targeting category	other localisation
EggNOG OGs	28J4J@1,2QRGK@2759
Ec32 ortholog description	Isopenicillin N synthase-like
Ec32 ortholog	Ec-12_004950.1
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	4
Model size	935
Cds size	933
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2749.7523.1	prot_H-paniculata_contig2749.7523.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig2749 9078..15411 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929830.5799546-CDS-H-paniculata_contig2749:9077..9223	1622929830.5799546-CDS-H-paniculata_contig2749:9077..9223	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2749 9078..9223 +
1691481029.8846233-CDS-H-paniculata_contig2749:9077..9223	1691481029.8846233-CDS-H-paniculata_contig2749:9077..9223	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2749 9078..9223 +
1622929830.5915182-CDS-H-paniculata_contig2749:12775..12916	1622929830.5915182-CDS-H-paniculata_contig2749:12775..12916	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2749 12776..12916 +
1691481029.89488-CDS-H-paniculata_contig2749:12775..12916	1691481029.89488-CDS-H-paniculata_contig2749:12775..12916	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2749 12776..12916 +
1622929830.6032073-CDS-H-paniculata_contig2749:13676..13997	1622929830.6032073-CDS-H-paniculata_contig2749:13676..13997	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2749 13677..13997 +
1691481029.9036362-CDS-H-paniculata_contig2749:13676..13997	1691481029.9036362-CDS-H-paniculata_contig2749:13676..13997	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2749 13677..13997 +
1622929830.616063-CDS-H-paniculata_contig2749:15086..15411	1622929830.616063-CDS-H-paniculata_contig2749:15086..15411	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2749 15087..15411 +
1691481029.9139788-CDS-H-paniculata_contig2749:15086..15411	1691481029.9139788-CDS-H-paniculata_contig2749:15086..15411	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2749 15087..15411 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig2749:9078..15411+
coding sequence from alignment at H-paniculata_contig2749:9078..15411+

protein sequence of mRNA_H-paniculata_contig2749.7523.1

>prot_H-paniculata_contig2749.7523.1 ID=prot_H-paniculata_contig2749.7523.1|Name=mRNA_H-paniculata_contig2749.7523.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=311bp
MVDVFIRHSTTINDVHIRVHKTAQYETVECISLLQRYSMVNKAELECFRY
SDLEKGADLKHTVERAFGDDGLGIVVVTGVLGISDSRRELFTLGHRFANF
PQETRASCEHPGSHFNFGWSHGKEMLEMGTPDFTKGSYYANPCHDAPFAH
DPEAVKAYPSFAHPNIWPDDHHDGRMTEFATEFKALGQAVVRVGVLVARQ
CDRYVESVHSLGGGGGRNGSGYEAGKLERVVSTARCHKGRLLHYFPRVQD
KQQAGTAMAATEEAADEPTIGAGDAGVAGQSAADGGGVIVGTDVAADRNG
RDGDAEGKDVG

mRNA from alignment at H-paniculata_contig2749:9078..15411+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig2749.7523.1 ID=mRNA_H-paniculata_contig2749.7523.1|Name=mRNA_H-paniculata_contig2749.7523.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6334bp|location=Sequence derived from alignment at H-paniculata_contig2749:9078..15411+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGATGTGTTTATCCGCCACTCGACAACAATTAACGATGTACACAT
ACGTGTGCACAAGACAGCACAGTACGAAACAGTAGAGTGCATCAGTCTAC
TGCAACGATACAGCATGGTAAACAAGGCCGAGCTCGAGTGCTTCAGGTGA
AAGAATGCTGCATGGACTGTGAACCGAAAACTAGAGACTACTTTCTCAAA
ATTCAAAAACTTGAAAACTTATTGAAGCAACCTGCGGTCGTTTCCTGCAG
TAGAAGTTGACCACGGCTACACTACACCAATGCAGCCATGTGTTGTCACC
ATCTCACCATCTGCCGCAGACCACTGCACCCTCATGCCGGTCTAGCTTAA
CCCTTTTCGCACCAGTTCCCATCTAATCCCTAGCTCGCAAACAGGGAAAC
ACGACAAGTATGACACATGTGAGATGATATGATTAGGAGAATAGATAGCC
GCTGATTCCGACATCGTGGAGACAGCAGTACATACAGCAGTACACAGAGT
AACACAACCAGGTAAGAATGGTTCTGGCTCCAACGACTACAGCCAGTGTT
CGACATTTGCTGTTAAATGCCTTTTTGCTTGCCAGAGAATAGCCTCCGGC
GCTAAACGGACAGTTGAAGAGAGCCTTATCATCGAGTGTAAACACGACAC
TGGAATATTGAAGGGGTGTGAAATTACTCCGAGAAGGACCGCACGGTGAC
CGTCAAATCAACTGTTGATGTTTTGTGTGTATCCAAGTTTTTTTTTTTTA
ATGACTGGACCTTATAACATAGATGTTTTAGATACTTATGCTGCATGACA
TAAACCGGTTGGCCGATGATTGTGTCAGGGTTTTCATTTTGGCGCCGCGT
TCGCGGATAGATGTGTGAGCAATTTTCCCGTTTGGCGGATGGTCATATAT
GTCAGGTGAGATCTATCGTTTTGTCGCCCGGTTCGCTGACGGTCATGCGA
GTCATGCGAGAATTGGCCCCGGGTGACTGATGATCATTGCTTCTTTCCTT
TCTCCGGTCAATTCGCGGATCGTGATGTAAGTTTTTTTCCACATCCAGTG
CCGGTCATGTATCTGTATGCCTCTCCTCGAGGCAGGTTAACCATTTTGTC
GAATGCGATGGTTGAAAATTCTTTGTTTTTATGGTTTATGCTTGCGTTGT
GCACCGACGCGTGCAGAAACAACGCCGGAACTACCGCTTCCGCTTCCCCT
AAGCCCCCGCCCTCTGGGCCTGGTGTGCGTTGGCAGATCTCAAATCTGCG
CCATTGCTGTCGTTTGCCAGCACAACAGGTTTTGGGCCCATATTGTAGGC
CCTCCAGGGCGTGACGTCGGCGTGGCGTCACCTACCATCAAAGTACAGTA
AATATGCTGAGTTTGTATATCTCGGCCCTCGGATTCGACGAAGAGGTGAA
CTCTATCTGAGGTCTAATGCATGTACCTCCAGTGCTGTTCATGTACGCTT
CTGTACCCATTCTGCGGAGTATTGGCAGAGGACATTGCTTTGTGTACGAT
GGGAGATCACTGACCTTCGCCTGGTCGTGTACTGCTTTCCGTACAGAATC
GTCACCCTCATGATTGGTTGGTTTAATTAACAGTGCTGTCAAACAGGGCT
AGCAGGTGGTCGTGTCGGTTCCCCGGCACGAAGGGGAAGCACCAAGACTG
TGATGTACTGCGCTACGTGCTGCCCGTTGAAGAATTTACACTCTGCAGGC
TCCGGCAGACATTAAAGACACCGTCTTGTGACGGGAGGGCAGGTATCGAT
GAGAGAAAATCTTGAGGGAACACGCTGTTGGCTCATCTCGTGGGAAACTC
TTCTCCGGTATGGCACCAACAATATACGATTTTATCTACAGGCCAGGCAT
AAAACCAGGAAATCGTTCACCCCCCGAACAAATACGAATACTTGCAAATG
GTTCTCACAAAAAACTAAAAGTATTCGCCTGAGTTTCATAATGAGTCTGT
GTATTCTGCGTGCCCCGGACAGTCCACGATTGCTAATAATAGTCGTAAAC
CGAATCGACAGGCATGGGTACTTTATTCTATGTGTCCGCCCATTCTGAAA
CTCAGGCGAATTATTTCACTTTTTTGTACAAATAGTCTGCAAATACTCGT
ATTCGTCCGGGGGGTGAAATGGTTCACCAATAATTCATCTCGTATTCTTC
GCAGCACGTGGACAGGAGAGATATTTCGATGTATTGGCGATTGGGCGCAA
CTTCACCGCGAATGTAGAGGGACAACGAACTCGAAGCTCAAGCTCGAGGA
ACTGTAGAACTACTTCGGTAAAATACTCAAGTATGAAAGCATCGGATAAA
GGTTTTTGCCTCAGCCTTCCGGGGGTTAAAAAAGAAAATCAAGCTCGCAC
AGTAGTGTCCGCGCTAACACCAGCTAGGCTACCAATGCCAACAGGGGTGT
CGCGTGTTCGCTGTATAATCTCTATAGATATCTCTCTATATATATATATT
GAAAGAAATCATATTACATTATTCGGTTAACGTCTGATAAACAGGATTAT
TATCCGAATTGCCAGTTAACCTTCAAGTATTGCCTATCCGGTCCGACGAA
TATATATATATATATATATATATATATAAACAGTAAACAATTAGAAGAAA
TGTAATAAGAATAAGAAAATGTACTTGTTGTGAGGCCTCACCTCTTTGTT
GTTTTACCTGTGTGTGACGTACTGTTTTTGAGTCGTTCGTGAACATGGTG
ATACATATAATATGATATATACATACATGTGCACATATATATAATATGTT
AAAGGCCAAATCGAAAATGACTCTTCATACTTGAAGATTGACTGGCATTT
CTGATTTATCAGGACGTTAACTGGATGGCGTTTGTTCATGTTATTAATAT
AAATACGTGTATCCTTTCAAAGAAATTGGACCGAGATTAATTTGCTGTCC
AATCCGCCCCAGCAGGGGGGAGGGGAGGCTAAGAGTCATGGGCGTATATC
CTCCTCCCCAAGATGCTTATGATACCAATCTCGCGAGTTTTGACCAAACC
CGTCGCCAAAATATCGACACTGTGATGATAGCGCTCTCCAAAGAAAGGTT
CGTTCTTCGCAACTTAGTATGTAAAAGTACGTAACCTTACAGAACCGCTC
AAATAGGACTAGTGATACAGGGACATTTTCACGGCAATGCCCGCAGTCTT
CAGCGGATCATTGGCAAGCGTTCACCGCCGAGTGGACAACACATAAAGGG
GGGGGGGGAAGGCAGAGAAACTGACGTCATTTACTCTGAACCTCCTCTCC
GTTCCCCCCGAAGTCACTCCTATACCCTCCACTAACTGGCAAGGTATCCA
TCAGTAGACCACGAGTATACACCTGCGGAGAAAATTTTGATCGAGGGTTG
TGTCATTACCACAGGGAATACAAACACGAGCACCTGCCAGTAACGCAACA
GTTAGTGGCAACGCCTCAACAAGCCAACGCGAGTACTGCAGTGGGACATA
CTAACTATTAGTACGAGAAGCTGTGGCAAACAATGGGCGCCGAGAGGTAG
CACTCGTGGAGGATCGAGTACCATACTCCACTCATAAATAGTACAGGCAA
AACGTGAGCACTGCCCACAGCTCGCCTCGTCTTCACTTTTACCCCACTTT
CCCACCTTCTAGGCCCGCGGCAGCTGTGTTGTCTCGTGTCATGCTCACTC
CGGTGTCCCGACCACCCTTTGATTATATGATGTGATGCCGCTCCTCAGGT
ATTCGGATTTGGAGAAAGGCGCTGACCTGAAGCACACGGTAGAGCGAGCG
TTCGGGGACGATGGTCTCGGGATCGTTGTGGTGACTGGCGTGCTCGGGAT
CAGCGATTCTCGGCGTGAGCTCTTTACCTTGGGACACAGGTATATGCTGT
ACTGGCCTGCAAGAAGAGCATGCACCTACCAGTACTCTTTTATGGTATTG
TATCTACTTATATAAGGAATTTGCGTAACTCTGTTCTTCGCTTTCAAGTA
TTTTGGATAATTGATTGTGGAAAAAATAAATCACGAGATTTCCCCAACGT
ATGTACGTAGAGTCGAGCTCCCCGACACGTACTGTGGAACTCGGGAGGAT
TTGAGGCTTCTAACCGAAACCCACAAAGCTGATAATAATATTATTTCACG
CCCCAGAGAAATACGAAATACAAGACACGAATAAATACGAGAAATCTGGA
ACGAATACTGTATCTGTTTGTGCTGAGGCGGATGTCCATGTGACGCGAAT
AATATGCATTGTACTCGATACACCATGGGGCATCAAAAAGATCGGGCAGA
TAGCGTATTTAATCTGTACAGTACCATCCGGAAAACAAACAGGACCTGCA
CTTGTGACTGTTCGCCAGGTATATGACCGCCTGGTGACCATCTGTAGAGT
GCCCATTCATAGACTTGTAAACGAATAAATACATGTCTATCCAAGACAAA
TAATGATAGTTCGCGATAGTTGCGAACGCTCCATTCGCATTTGTCCGGGG
GGTGTATTCTGTTACATGATTCTCTCTCTCTTTTCCTCCCCCTCCCTCTC
CCCTCTCTGTTTTTCGCTGTCTGAACGAGAATGACATAAATATGTTGCTA
AACACACACAAACACATACATACACATACATCACCAAAAACAAACAAAGG
TTCGCCAACTTTCCACAAGAGACGAGGGCGAGTTGCGAGCACCCTGGCAG
CCACTTCAACTTCGGGTGGAGTCACGGCAAGGAGATGCTGGAGATGGGCA
CGCCTGATTTCACCAAGGGGTCCTACTACGCCAATCCCTGCCACGATGCG
CCTTTTGCCCACGACCCTGAGGCCGTCAAGGCTTACCCGTCTTTCGCACA
CCCGAATATCTGGCCTGACGACCACCATGATGGGAGAATGACTGAGTTTG
CGACAGAGTTCAAGGCCCTTGGGCAGGCGGTTGTGCGTGTTGGGGTTTTG
GTGGCGCGCCAGTGCGACAGGTAATATGTTTATTTTCGTGTTTTTGTGTG
CAGTGTATGCGGTGTGTGTGGTGTGTGTGGTGTGTGTACTCGCTCGTATT
TGTTTGTTCCATTAGCTCTCTTTTTCTCTCAACAAAGTGTGTTCAGTTAT
ACGTAACGTTAGCACTAACAGTTGGTGTAGTGGAAGTATTGGACATACAC
ACACTGGATGGTTGGAACCCCCTTGAGGGGTGAGGGGGGAGTACTTGTAT
GACCATCCTCCGTCAGCCTTGCGTAAACAGCTCTACATGATCAGAGTGAC
ACTTGAAGTGCGTTATCACACAAGAAAGTGACGTCTGCGCTGTGTGTGTG
GCGGAGACGACTTTAGATCGTGCGTGGGAAGATCGTAGTTCCATGAGATA
CTACTCGGGGTGTAGCCACGTCTGCCCAATATGCAGCATTTCTTTACCCG
AGATAAATGCCAAAATATGAATCGATTAGTCACACCGTTTTGGCGCAGTA
ACGGAAGTATGAGAAGTTAGTGCAGAAGCTGGGGCTATCCTTGTGAAATG
CAGCTTGGCCGGTGAGTTACCGGCATACATAGCTCCGTCCCAGTGTAGTA
ATAATACGAGGCCCACAGTCGTCTGACTTTCGCATGCGCTATCATGGGTA
ACCTCCCCCCCCCCCCCCCCCCCGCGTGCGTAAAGCGCGTGAAACACTTC
AAAGCCTCCTTCCTACCGTTAACATTTTCCCCATATCCCTTTTTTCAAGC
CAAAAGGCACAAATTTGCAAAGCTCATCACAGTACCGTACCAGCAGCAGT
GTATACCCAGTATAGAGCTCTTGTGGTCTTTGATTATTCAGTATATTACA
TTGGACCGAATAGAAAATGGCAAGGATGAGAAGGAGGAAGGAGGTCCATT
CGAAGAGGATACCGAGTATTTTTCCGATGGATTTTTTTTAATTGTAGGTC
CATTGTATACACTAACTTGAGTCCACTCAATGGACAGTATACTGCTACTG
TGTCGACCTTTGTAAACAAAACTCGACAAAATTTGGATATGCACCACCAC
ACAACACACAACACACACCACACACCACACACCACACACCACACCACGTG
GGTCCGCAGGTATGTCGAAAGTGTGCATTCCCTTGGCGGCGGCGGCGGCC
GAAACGGCAGCGGCTACGAGGCGGGAAAACTGGAGCGCGTTGTGTCCACA
GCCCGATGCCACAAGGGCCGCCTTTTGCACTACTTTCCGCGGGTACAAGA
CAAGCAGCAAGCGGGAACGGCGATGGCGGCCACGGAGGAGGCAGCTGATG
AACCGACAATTGGTGCTGGTGATGCTGGTGTCGCCGGTCAAAGTGCTGCG
GATGGCGGAGGCGTTATCGTTGGCACCGACGTTGCGGCAGACAGAAATGG
TCGCGATGGAGATGCGGAAGGAAAAGATGTAGGG

Coding sequence (CDS) from alignment at H-paniculata_contig2749:9078..15411+

>mRNA_H-paniculata_contig2749.7523.1 ID=mRNA_H-paniculata_contig2749.7523.1|Name=mRNA_H-paniculata_contig2749.7523.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1866bp|location=Sequence derived from alignment at H-paniculata_contig2749:9078..15411+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGATGTGTTTATCCGCCACTCGACAACAATTAACGATGTACACAT
ACGTGTGCACAAGACAGCACAGTACGAAACAGTAGAGTGCATCAGTCTAC
TGCAACGATACAGCATGGTAAACAAGGCCGAGCTCGAGTGCTTCAGATGG
TTGATGTGTTTATCCGCCACTCGACAACAATTAACGATGTACACATACGT
GTGCACAAGACAGCACAGTACGAAACAGTAGAGTGCATCAGTCTACTGCA
ACGATACAGCATGGTAAACAAGGCCGAGCTCGAGTGCTTCAGGTATTCGG
ATTTGGAGAAAGGCGCTGACCTGAAGCACACGGTAGAGCGAGCGTTCGGG
GACGATGGTCTCGGGATCGTTGTGGTGACTGGCGTGCTCGGGATCAGCGA
TTCTCGGCGTGAGCTCTTTACCTTGGGACACAGGTATTCGGATTTGGAGA
AAGGCGCTGACCTGAAGCACACGGTAGAGCGAGCGTTCGGGGACGATGGT
CTCGGGATCGTTGTGGTGACTGGCGTGCTCGGGATCAGCGATTCTCGGCG
TGAGCTCTTTACCTTGGGACACAGGTTCGCCAACTTTCCACAAGAGACGA
GGGCGAGTTGCGAGCACCCTGGCAGCCACTTCAACTTCGGGTGGAGTCAC
GGCAAGGAGATGCTGGAGATGGGCACGCCTGATTTCACCAAGGGGTCCTA
CTACGCCAATCCCTGCCACGATGCGCCTTTTGCCCACGACCCTGAGGCCG
TCAAGGCTTACCCGTCTTTCGCACACCCGAATATCTGGCCTGACGACCAC
CATGATGGGAGAATGACTGAGTTTGCGACAGAGTTCAAGGCCCTTGGGCA
GGCGGTTGTGCGTGTTGGGGTTTTGGTGGCGCGCCAGTGCGACAGGTTCG
CCAACTTTCCACAAGAGACGAGGGCGAGTTGCGAGCACCCTGGCAGCCAC
TTCAACTTCGGGTGGAGTCACGGCAAGGAGATGCTGGAGATGGGCACGCC
TGATTTCACCAAGGGGTCCTACTACGCCAATCCCTGCCACGATGCGCCTT
TTGCCCACGACCCTGAGGCCGTCAAGGCTTACCCGTCTTTCGCACACCCG
AATATCTGGCCTGACGACCACCATGATGGGAGAATGACTGAGTTTGCGAC
AGAGTTCAAGGCCCTTGGGCAGGCGGTTGTGCGTGTTGGGGTTTTGGTGG
CGCGCCAGTGCGACAGGTATGTCGAAAGTGTGCATTCCCTTGGCGGCGGC
GGCGGCCGAAACGGCAGCGGCTACGAGGCGGGAAAACTGGAGCGCGTTGT
GTCCACAGCCCGATGCCACAAGGGCCGCCTTTTGCACTACTTTCCGCGGG
TACAAGACAAGCAGCAAGCGGGAACGGCGATGGCGGCCACGGAGGAGGCA
GCTGATGAACCGACAATTGGTGCTGGTGATGCTGGTGTCGCCGGTCAAAG
TGCTGCGGATGGCGGAGGCGTTATCGTTGGCACCGACGTTGCGGCAGACA
GAAATGGTCGCGATGGAGATGCGGAAGGAAAAGATGTAGGGGTATGTCGA
AAGTGTGCATTCCCTTGGCGGCGGCGGCGGCCGAAACGGCAGCGGCTACG
AGGCGGGAAAACTGGAGCGCGTTGTGTCCACAGCCCGATGCCACAAGGGC
CGCCTTTTGCACTACTTTCCGCGGGTACAAGACAAGCAGCAAGCGGGAAC
GGCGATGGCGGCCACGGAGGAGGCAGCTGATGAACCGACAATTGGTGCTG
GTGATGCTGGTGTCGCCGGTCAAAGTGCTGCGGATGGCGGAGGCGTTATC
GTTGGCACCGACGTTGCGGCAGACAGAAATGGTCGCGATGGAGATGCGGA
AGGAAAAGATGTAGGG