mRNA_H-paniculata_contig2749.7522.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 177 bits (448), Expect = 1.410e-51 Identity = 87/176 (49.43%), Postives = 116/176 (65.91%), Query Frame = 2
Query: 11 QKGVYLLVDNGYHEWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFGVLKGRFRILKLPILYREKEKIDNVFFACCILHNMLHAHDGLDVLEEDADWAGVDGQHDPDVAEPETDHRWVGFR----------RNFDGDDGH---EVESDHKVLKKKLIAHFSYRRKNDDITWLAR 499
++G +L++DN YHEW L+ PSK + ++T +S+ LE VRK VECFFG+LKGRFRILKL + Y ++E IDN+FF CCILHNMLH DGLDV +E+ DW G G HD +P TD+ VG + G+ GH E DH LK++LI F++R+K +DITWL+R
Sbjct: 80 RRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSR 255
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 172 bits (437), Expect = 4.000e-50 Identity = 83/161 (51.55%), Postives = 107/161 (66.46%), Query Frame = 2
Query: 14 KGVYLLVDNGYHEWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFGVLKGRFRILKLPILYREKEKIDNVFFACCILHNMLHAHDGLDVLEEDADWAGVDGQHDPDVAEPETDHRWVGFRRNFDGDDGHEVESDHKVLKKKLIAHFSYRRKNDDITWLA 496
KG YLLVDNGYH+W L+PPSK + + + +SK LE VRK VECFFG++KG FRILKL I Y ++E IDNVFF CCILHNMLH++D +EE+ +WAG G H+ P D VG + + + EVES +K+LIA F YR+ +DI WL+
Sbjct: 81 KGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWLS 241
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.280e-48 Identity = 84/161 (52.17%), Postives = 108/161 (67.08%), Query Frame = 2
Query: 14 KGVYLLVDNGYHEWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFGVLKGRFRILKLPILYREKEKIDNVFFACCILHNMLHAHDGLDVLEEDADWAGVDGQHDPDVAEPETDHRWVGFRRNFDGDDGHEVESDHKVLKKKLIAHFSYRRKNDDITWLA 496
KG YLLVDNGYH+W L+PPSK + + + +SK LE VRK VECFFG++KGRFRILKL I Y ++E IDNVFF CCILHNMLH++D +EE+ +WAG G H+ P D VG + + + EVES +K+LIA F YR+ +DI WL+
Sbjct: 322 KGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWLS 482
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Match: A0A6H5L135_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L135_9PHAE) HSP 1 Score: 164 bits (415), Expect = 1.030e-47 Identity = 81/160 (50.62%), Postives = 101/160 (63.12%), Query Frame = 2
Query: 50 EWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFGVLKGRFRILKLPILYREKEKIDNVFFACCILHNMLHAHDGLDVLEEDADWAGVDGQHDPDVAEPETDHRWVGFRRNFDGDDGHEVESD----------HKVLKKKLIAHFSYRRKNDDITWLAR 499
+W L+ PSK E+T +S+TLE VRK VECFF +LKGRFRILKL + YR KE IDN+F CCILHNMLH DG+DV EED DW G G HDP +P TD +G +G + H+ LKK+LI FSYR++++DITWL+R
Sbjct: 11 QWVTLIAPSKYPANSEDTAFSRTLESVRKDVECFFDILKGRFRILKLRLGYRSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESFSYRKRHNDITWLSR 170
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 168 bits (425), Expect = 2.720e-47 Identity = 84/163 (51.53%), Postives = 109/163 (66.87%), Query Frame = 2
Query: 14 KGVYLLVDNGYHEWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFGVLKGRFRILKLPILYREKEKIDNVFFACCILHNMLHAHDGLDVLEEDADWAGVDGQHDPDVAEPETDHRWVGFRRNFDGDDGHEVESDHKVLKKKLIAHFSYRRKND-DITWLAR 499
KG Y L DNGYH+W +L+ PSK L+E++ +SK LE VRK VECFFG+LKGRFRILKL + Y+ +E+IDNVFF CCILHNMLH DG+D L E+ +W G EPE D G + D +D ++E H V K++L F+YR+K+ DI WL+R
Sbjct: 169 KGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTK---DVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 328
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.200e-46 Identity = 86/163 (52.76%), Postives = 111/163 (68.10%), Query Frame = 2
Query: 14 KGVYLLVDNGYHEWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFGVLKGRFRILKLPILYREKEKIDNVFFACCILHNMLHAHDGLDVLEEDADWAGVDGQHDPDVAEPETDHRWVGFRRNFDGDDGHEVESDHKVLKKKLIAHFSYRRKND-DITWLAR 499
KG YLLVDNGYH+W +L+ PSK L+E + +SK LE VRK VECFFG+LKGRFRILKL + Y+ +E+IDNVFF C ILHNMLH DG+D L E+ +W G EPE D VG + D +D ++E +H V K++L F+YR+K+ DI WL+R
Sbjct: 279 KGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTK---DVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVWLSR 438
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 162 bits (411), Expect = 1.290e-45 Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 2
Query: 14 KGVYLLVDNGYHEWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFGVLKGRFRILKLPILYREKEKIDNVFFACCILHNMLHAHDGLDVLEEDADWAGVDGQHDPDVAEPETDHRWVGFRRNFDGDDGHEVESDHKVLKKKLIAHFSYRRKN 475
KG Y+LVDNGYH+W +L+ PSK L+E + +SK LE VRK VECFFG+LKGR RIL L + ++ +E+IDNVFF CCILHNMLH DG+D L E+ +W G V EPE D VG + D + +VE+ H V K++L F+YR+K+
Sbjct: 124 KGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTK---DVNGRPQVEAGHAVRKRQLTTSFAYRKKH 274
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Match: A0A6H5K5C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5C1_9PHAE) HSP 1 Score: 167 bits (422), Expect = 2.570e-45 Identity = 81/160 (50.62%), Postives = 103/160 (64.38%), Query Frame = 2
Query: 50 EWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFGVLKGRFRILKLPILYREKEKIDNVFFACCILHNMLHAHDGLDVLEEDADWAGVDGQHDPDVAEPETDHRWVGFRRNFDGDDGHEVESD----------HKVLKKKLIAHFSYRRKNDDITWLAR 499
+W L+ PSK E+T +S+TLE VRK VECFFG+LKGRFRILKL + YR K+ IDN+F+ CCILHNMLH DG+DV EED DW G G HDP +P TD +G +G + H+ LKK+LI FSYR++++DITWL+R
Sbjct: 332 KWVTLIAPSKYPANSEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYRSKKDIDNIFYTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESFSYRKRHNDITWLSR 491
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 164 bits (415), Expect = 5.100e-45 Identity = 84/165 (50.91%), Postives = 109/165 (66.06%), Query Frame = 2
Query: 8 EQKGVYLLVDNGYHEWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFGVLKGRFRILKLPILYREKEKIDNVFFACCILHNMLHAHDGLDVLEEDADWAGVDGQHDPDVAEPETDHRWVGFRRNFDGD-DGHEVESDHKVLKKKLIAHFSYRR-KNDDITWLA 496
E+KG YLLVDNGYH+W L+PPSK + + +SK LE RK VEC+FG+LKGRFRI KL I + ++E IDNVFF CCILHNMLH+ D + E+ +WAG G H+ +P TD+ VG + DG + EVE+ L+ KL+ +F YRR K DI WL+
Sbjct: 245 EEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVG---SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 164 bits (414), Expect = 1.900e-44 Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 2
Query: 14 KGVYLLVDNGYHEWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFGVLKGRFRILKLPILYREKEKIDNVFFACCILHNMLHAHDGLDVLEEDADWAGVDGQHDPDVAEPETDHRWVGFRRNFDGDDGHEVESDHKVLKKKLIAHFSYRRKND-DITWLAR 499
KG YL+VDNGYH+W +L+ PSK L+E + +SK LE VRK VECFFG+LK RFRILKL + Y+++E++D VFF CCILHNMLH HDG+ LEED +W G + + D VG + D +D +VE+ H LK+KL +F YR+K+ DI WL+R
Sbjct: 293 KGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVG--SAELQNTSGHNLDSSSVGTK---DLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSR 450 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2749.7522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2749.7522.1 >prot_H-paniculata_contig2749.7522.1 ID=prot_H-paniculata_contig2749.7522.1|Name=mRNA_H-paniculata_contig2749.7522.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp MEQKGVYLLVDNGYHEWAVLMPPSKRSLTEEETRWSKTLEIVRKGVECFFback to top mRNA from alignment at H-paniculata_contig2749:4194..5297- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2749.7522.1 ID=mRNA_H-paniculata_contig2749.7522.1|Name=mRNA_H-paniculata_contig2749.7522.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1104bp|location=Sequence derived from alignment at H-paniculata_contig2749:4194..5297- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2749:4194..5297- >mRNA_H-paniculata_contig2749.7522.1 ID=mRNA_H-paniculata_contig2749.7522.1|Name=mRNA_H-paniculata_contig2749.7522.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at H-paniculata_contig2749:4194..5297- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |