prot_H-paniculata_contig27481.7520.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig27481.7520.1
Unique Name	prot_H-paniculata_contig27481.7520.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	67

Homology

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BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Match: A0A6H5JWF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF9_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 3.640e-21
Identity = 45/66 (68.18%), Postives = 52/66 (78.79%), Query Frame = 0

Query:    1 VSLEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAAFLGNKAPHSAIGMQSP 66
            V LEYASTNTPQQIG +ER GRT AAMVRC+L DSGLPKFL   LM TA +L N+ PH+A+G  +P
Sbjct:  354 VKLEYASTNTPQQIGANERAGRTLAAMVRCLLTDSGLPKFLWGGLMQTAVYLSNRVPHAALGNITP 419

[Close]

BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.380e-20
Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 0

Query:    3 LEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAAFLGNKAPHSAIGMQSP 66
            LEYASTNTPQQ+G +ER GRT AAMVRC+L DSGLP+FL  +LM TAA+L N+ PH+A+G  +P
Sbjct:   83 LEYASTNTPQQMGANERAGRTLAAMVRCILTDSGLPQFLWGQLMQTAAYLSNRVPHAALGNITP 146

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BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.070e-19
Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 0

Query:    1 VSLEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAAFLGNKAPHSAIGMQSP 66
            + L +ASTNTPQ+IG +ER+GRT A MVRC+LADSGLP FL EEL  TA++L N++PHSA    +P
Sbjct:  414 IKLLFASTNTPQRIGANERIGRTLAGMVRCLLADSGLPHFLWEELFMTASYLSNRSPHSASDNVTP 479

[Close]

BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Match: A0A6H5K5H2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H2_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.120e-16
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0

Query:    1 VSLEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAAFLGNKAPHSAIGMQSP 66
            + LEYA+TNTPQQIG+SER G+T A + RC+L D   P  +  ELM TAA+L N++PHSA+G  +P
Sbjct:   59 IKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 124

[Close]

BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.150e-16
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0

Query:    1 VSLEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAAFLGNKAPHSAIGMQSP 66
            + LEYA+TNTPQQIG+SER G+T A + RC+L D   P  +  ELM TAA+L N++PHSA+G  +P
Sbjct:  517 IKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 582

[Close]

BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.160e-16
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0

Query:    1 VSLEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAAFLGNKAPHSAIGMQSP 66
            + LEYA+TNTPQQIG+SER G+T A + RC+L D   P  +  ELM TAA+L N++PHSA+G  +P
Sbjct:  193 IKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 258

[Close]

BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.170e-16
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0

Query:    1 VSLEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAAFLGNKAPHSAIGMQSP 66
            + LEYA+TNTPQQIG+SER G+T A + RC+L D   P  +  ELM TAA+L N++PHSA+G  +P
Sbjct:  389 IKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 454

[Close]

BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.170e-16
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0

Query:    1 VSLEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAAFLGNKAPHSAIGMQSP 66
            + LEYA+TNTPQQIG+SER G+T A + RC+L D   P  +  ELM TAA+L N++PHSA+G  +P
Sbjct:  193 IKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 258

[Close]

BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.170e-16
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0

Query:    1 VSLEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAAFLGNKAPHSAIGMQSP 66
            + LEYA+TNTPQQIG+SER G+T A + RC+L D   P  +  ELM TAA+L N++PHSA+G  +P
Sbjct:  193 IKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 258

[Close]

BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.170e-16
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0

Query:    1 VSLEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAAFLGNKAPHSAIGMQSP 66
            + LEYA+TNTPQQIG+SER G+T A + RC+L D   P  +  ELM TAA+L N++PHSA+G  +P
Sbjct:  193 IKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 258

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig27481.7520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JWF9_9PHAE	3.640e-21	68.18	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5L6R7_9PHAE	1.380e-20	67.19	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1J1_9PHAE	2.070e-19	62.12	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K5H2_9PHAE	2.120e-16	56.06	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KVF6_9PHAE	2.150e-16	56.06	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K500_9PHAE	2.160e-16	56.06	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JSL6_9PHAE	2.170e-16	56.06	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JRJ1_9PHAE	2.170e-16	56.06	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JJR8_9PHAE	2.170e-16	56.06	Integrase catalytic domain-containing protein n=11...	[more]
A0A6H5KCT3_9PHAE	2.170e-16	56.06	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..66 e-value: 3.3E-6 score: 28.4
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..66 score: 8.505
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 3..66

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig27481	contig	H-paniculata_contig27481:1254..1454 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig27481.7520.1	mRNA_H-paniculata_contig27481.7520.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig27481 1254..1454 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig27481.7520.1 ID=prot_H-paniculata_contig27481.7520.1|Name=mRNA_H-paniculata_contig27481.7520.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
VSLEYASTNTPQQIGMSERVGRTFAAMVRCMLADSGLPKFLQEELMFTAA
FLGNKAPHSAIGMQSP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf