prot_H-paniculata_contig27480.7519.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27480.7519.1
Unique Nameprot_H-paniculata_contig27480.7519.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
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BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: D8LBA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA1_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.510e-25
Identity = 65/113 (57.52%), Postives = 82/113 (72.57%), Query Frame = 0 
Query:    1 MREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMKSEKEAMRDQRDAEEDLAIIMNQRLVKEVXXXXXXXXXXXXXXXXXXXXWIKDRLCAEMEEARKARKR 113
            MR++D AIRKEQ+E KRAYAKASQ+AARD+LEMQRAANSE+ +R+K EK+ M++QR+AEE+LA+ MNQRLVKEV                      K++LC E+EE R ARKR
Sbjct:  360 MRDRDAAIRKEQVEMKRAYAKASQQAARDSLEMQRAANSEVAARVKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKR 472
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BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Match: A0A835ZFS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.410e-10
Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 0 
Query:    1 MREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMKSEKEAMRDQRDAEEDLAIIMNQRLVKEVXXXXXXXXXXXXXXXXXXXXWIKDRLCAEMEEARKAR 111
            MREKD  ++ EQ ERKR  AKASQ AAR AL  Q AAN E+   +K+EK  M  QR AEE+L +++N+++VK+V                      K+ L A++EE R+ R
Sbjct:  375 MREKDAQLKLEQTERKRQQAKASQAAARAALIGQDAANHELAQCIKAEKAVMAQQRRAEEELKLMINKQVVKQVTEVRGTAPKEAVARTLQQRRQAKEHLTAQLEEGRRRR 485
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27480.7519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBA1_ECTSI3.510e-2557.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFS9_9STRA3.410e-1042.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 42..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27480contigH-paniculata_contig27480:1222..3072 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27480.7519.1mRNA_H-paniculata_contig27480.7519.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27480 210..3072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27480.7519.1 ID=prot_H-paniculata_contig27480.7519.1|Name=mRNA_H-paniculata_contig27480.7519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
MREKDVAIRKEQMERKRAYAKASQRAARDALEMQRAANSEIVSRMKSEKE
AMRDQRDAEEDLAIIMNQRLVKEVTEVRDTAPRDAVQHMLDEKKWIKDRL
CAEMEEARKARKR*
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