mRNA_H-paniculata_contig27479.7517.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Match: A0A6H5K3W8_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3W8_9PHAE) HSP 1 Score: 208 bits (530), Expect = 3.570e-62 Identity = 104/147 (70.75%), Postives = 122/147 (82.99%), Query Frame = 1
Query: 1 ATWSELLSPTQPALRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYSDSEQLGGNILVGLFKLTGEVFAFFFVDRTGRRPLLLTSSGLVTFFLFILAIGFWVGAPSWITLGGLCVFMWSFSLGMGALTFLIAAEVRNVRQEAK 441
++WSEL+ PAL++TVLLGLGLGIAQQASGSEAAVYYSP++L DAGL SDS +LGGNILVGLFKL GEVFA+F VDRTGRRPL + SS LVTFFL L + F AP+W+TL GLC+FMWSFSLGMGALTFL+AAE+ +R +
Sbjct: 295 SSWSELVCTASPALKSTVLLGLGLGIAQQASGSEAAVYYSPSVLSDAGLKSDSAELGGNILVGLFKLGGEVFAYFLVDRTGRRPLFIASSSLVTFFLVFLGLTFSASAPAWMTLSGLCLFMWSFSLGMGALTFLVAAEIFPLRYRGR 441
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Match: D7FTG6_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG6_ECTSI) HSP 1 Score: 135 bits (340), Expect = 2.580e-34 Identity = 73/147 (49.66%), Postives = 103/147 (70.07%), Query Frame = 1
Query: 1 ATWSELLSPTQPALRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYSDSEQLGGNILVGLFKLTGEVFAFFFVDRTGRRPLLLTSSGLVTFFLFILAIGFWVGAPSWITLGGLCVFMWSFSLGMGALTFLIAAEVRNVRQEAK 441
ATW ++L+P+ ++A ++LG+GLG QQASGSEAAVYY+P +L+D G +++ L GN+ VG FKL GEV AF +DR GRRPL L SS LVT L ++ F + S +TL LC+FM++FSLG+G +TF++A+E+ V K
Sbjct: 343 ATWRDVLAPSDRTVKAAMVLGIGLGFWQQASGSEAAVYYTPEVLKDKG-WANRAILRGNMGVGGFKLLGEVVAFMLLDRIGRRPLFLVSSVLVTLCLLMVGFAFLLNWTSMLTLFWLCMFMFTFSLGLGPVTFVVASEIFPVAIRGK 488
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Match: D8LJ49_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ49_ECTSI) HSP 1 Score: 127 bits (318), Expect = 3.750e-31 Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 7 WSELLSPTQPALRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYSDSEQLGGNILVGLFKLTGEVFAFFFVDRTGRRPLLLTSSGLVTFFLFILAIGFWVGAPSWITLGGLCVFMWSFSLGMGALTFLIAAEVRNVRQEAK 441
W E+L P+ + A + +GLGLG QQASGSEAAVYYSP++LE AG+ S L G +VG+FKL GEV A ++R GRRPL L SS T L ++A F++ + TL LC FM+ FS+G+G LTF++AAEV ++ K
Sbjct: 332 WMEVLWPSDKVVGAALFVGLGLGFWQQASGSEAAVYYSPHVLEAAGMTSRGLLLAGTCMVGVFKLLGEVLAAVLIERVGRRPLFLLSSITSTLTLLLIAQSFFLEWSAIPTLVVLCAFMFCFSIGLGPLTFVVAAEVFPMQVRGK 476
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Match: A0A835Z5D9_9STRA (General substrate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5D9_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.660e-30 Identity = 70/139 (50.36%), Postives = 91/139 (65.47%), Query Frame = 1
Query: 1 ATWSELLSPTQPALRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYSDSEQLGGNILVGLFKLTGEVFAFFFVDRTGRRPLLLTSSGLVTFFLFILAIGFWVGAPSWITLGGLCVFMWSFSLGMGALTFLIAAEV 417
A W ++L P+ A+ A V +GLGLG QQASGSEAAVYYSP +L+ +G + + L GN+ VG FKL GEV AFF +DR GRRPLLL SS T L +A+ F + L L FM FSLG+G +TF++A+E+
Sbjct: 236 ARWKDVLCPSDRAIAAAVSIGLGLGFWQQASGSEAAVYYSPEVLKHSG-WDGRDLLLGNMAVGTFKLAGEVVAFFLLDRVGRRPLLLVSSITSTLCLMAIALAFHLQWGGGAVLFLLSSFMLCFSLGLGPVTFVVASEI 373
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Match: A0A4D9D9C2_9STRA (MFS domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9C2_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.960e-29 Identity = 65/137 (47.45%), Postives = 89/137 (64.96%), Query Frame = 1
Query: 7 WSELLSPTQPALRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYSDSEQLGGNILVGLFKLTGEVFAFFFVDRTGRRPLLLTSSGLVTFFLFILAIGFWVGAPSWITLGGLCVFMWSFSLGMGALTFLIAAEV 417
WSE+L P A+ VL+GL LG QQ+SGSEAAVYYSP IL +AG+ S + Q GNI + L K GE+ A +DR GR+PL ++S+ FFL + F P + + LC+FM FS+GMGA+TF++A+E+
Sbjct: 256 WSEVLCPRHRAILLPVLMGLALGFFQQSSGSEAAVYYSPQILAEAGMSSTAHQSLGNIAICLCKFAGEIVAMLSMDRVGRKPLFVSSALGSGFFLVLAGASFQYSLPPSLLMTSLCLFMAFFSVGMGAITFVVASEI 392
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Match: A0A6H5JT77_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT77_9PHAE) HSP 1 Score: 120 bits (301), Expect = 7.580e-29 Identity = 67/126 (53.17%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 40 LRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYSDSEQLGGNILVGLFKLTGEVFAFFFVDRTGRRPLLLTSSGLVTFFLFILAIGFWVGAPSWITLGGLCVFMWSFSLGMGALTFLIAAEV 417
+RA + +GLGLG QQASGSEAAVYYSP++LE AG+ S L G +VG+FKL GEV A ++R GRRPL L SS T L ++A F++ + TL LC FM+ FS+G+G LTF++AAEV
Sbjct: 482 VRAALFVGLGLGFWQQASGSEAAVYYSPHVLEAAGMTSRGLLLAGTCMVGVFKLLGEVLAAVLIERVGRRPLFLLSSITSTLTLLLIAQSFFMEWSAVPTLVVLCAFMFCFSIGLGPLTFVVAAEV 607
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Match: A0A6A7G7L9_9CRUS (Polyol transporter 4 n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G7L9_9CRUS) HSP 1 Score: 116 bits (290), Expect = 1.610e-27 Identity = 57/137 (41.61%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 7 WSELLSPTQPALRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYSDSEQLGGNILVGLFKLTGEVFAFFFVDRTGRRPLLLTSSGLVTFFLFILAIGFWVGAPSWITLGGLCVFMWSFSLGMGALTFLIAAEV 417
W +LL PT PA++ ++ G+G QQASGSEAAVYY+P IL +AG+ + + G I+VG FK T + A +D+ GRRP+++TS+ +V L +L + F + AP + +GG+C++M F +G+G + +L+ AE+
Sbjct: 265 WMDLLRPT-PAVKLMLIAGVGAAFFQQASGSEAAVYYTPKILAEAGIEGERNAIAGAIVVGAFKTTTLIIASLLLDKIGRRPMMITSTIVVMIALSLLGMSFMINAPPFAMIGGMCLYMIGFGIGLGPVGWLLIAEI 400
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Match: A0A7S2XV01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV01_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.390e-25 Identity = 66/148 (44.59%), Postives = 92/148 (62.16%), Query Frame = 1
Query: 1 ATWSELLS-PTQPALRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYSDSEQLGGNILVGLFKLTGEVFAFFFVDRTGRRPLLLTSSGLVTFFLFILAIGFWVGAPSWITLGGLCVFMWSFSLGMGALTFLIAAEVRNVRQEAK 441
A+W E+L P P+ R VLL + LG QQA+GSEA VYY+P +L DAG+ S S L G LVG+ KL GEV + V+ GRR LL SS LVT L ++I F + ++ + LC +MW FS+G+G +T++ +E+ R +AK
Sbjct: 67 ASWEEMLHLPDWPSKR-VVLLTIALGFWQQATGSEAVVYYTPVVLRDAGMGSSSMLLLGTTLVGIAKLLGEVVCAYLVEGVGRRRLLNLSSVLVTVSLVAISITFALSKNAYANIFLLCNYMWWFSIGLGPVTWVCMSELLPTRLKAK 213
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Match: A0A7R9YB64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB64_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.250e-23 Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 1
Query: 7 WSELLSPTQPALRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYSDSEQLGGNILVGLFKLTGEVFAFFFVDRTGRRPLLLTSSGLVTFFLFILAIGFWVGAPSWITLGGLCVFMWSFSLGMGALTFLIAAEVRNVRQEAK 441
W +L P+ PA++ +L G+GLGI QQ +GSEA +YYSP ILEDAG + +L+G+ KL+ ++VD TGRRPLL+ S+ L+ FL +LA F S +T+ +C F+ +FS+G+G + +L AEV + AK
Sbjct: 306 WKPILRPS-PAVKLMLLAGVGLGIMQQLNGSEAFIYYSPRILEDAGFDDRGQLFAFMVLIGMCKLSFIGVGAYYVDDTGRRPLLMRSTLLMALFLTLLAFSFPEHNLSGLTIFLICAFVGAFSIGVGPICWLGVAEVFPLHLRAK 449
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Match: C1EFN4_MICCC (Major facilitator superfamily n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EFN4_MICCC) HSP 1 Score: 103 bits (258), Expect = 4.470e-23 Identity = 64/149 (42.95%), Postives = 90/149 (60.40%), Query Frame = 1
Query: 7 WSELLSPTQPALRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYSDSEQLGGNILVGLFKLTGEVFAFFFVDRTGRRPLLLTSSGLVTFFLFILAIGFWV----GAPSWITLGGLCVFMWSFSLGMGALTFLIAAEVRNVRQEAK 441
W+ L +P R +L+G G QQA+GSEAAVYY P +L+ AG+ S+ +QLG +VG+ K F VDR GRR +LL+S VT L++LA G+ + ITL LC FM SFSLGMG +T+++A+E+ +R +K
Sbjct: 276 WARLFE--EPVARRALLIGAGTAFFQQANGSEAAVYYVPQVLKAAGVESERDQLGAAAVVGMCKTVFITVGQFSVDRYGRRVMLLSSIAAVTASLWLLAYCLGAAQAGGSAAGITLFALCFFMASFSLGMGPVTWVVASEIFPLRVRSK 422 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27479.7517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27479.7517.1 >prot_H-paniculata_contig27479.7517.1 ID=prot_H-paniculata_contig27479.7517.1|Name=mRNA_H-paniculata_contig27479.7517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp ATWSELLSPTQPALRATVLLGLGLGIAQQASGSEAAVYYSPNILEDAGLYback to top mRNA from alignment at H-paniculata_contig27479:1311..2982+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27479.7517.1 ID=mRNA_H-paniculata_contig27479.7517.1|Name=mRNA_H-paniculata_contig27479.7517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1672bp|location=Sequence derived from alignment at H-paniculata_contig27479:1311..2982+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27479:1311..2982+ >mRNA_H-paniculata_contig27479.7517.1 ID=mRNA_H-paniculata_contig27479.7517.1|Name=mRNA_H-paniculata_contig27479.7517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at H-paniculata_contig27479:1311..2982+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |