prot_H-paniculata_contig27462.7514.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27462.7514.1
Unique Nameprot_H-paniculata_contig27462.7514.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length149
Homology
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Match: D7FR56_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR56_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 3.280e-70
Identity = 112/143 (78.32%), Postives = 125/143 (87.41%), Query Frame = 0
Query:    1 MLCSLRVLLWCTMAQWAVRKPPSVVLLYDLVSQGQQLTQVDHDLLETLGTMARRASVWEAAVHDAFCAPKDNVSTPIDMKVLHTLLAEAKHIPVSLPLEPKVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACVKLK 143
            MLCSLRVLLWCTMAQWAVRKPPSV+LLYDLVSQG QLTQVDH+LLETLG MA+RAS+WEA+V DAF  P +NV + ID+  L  LL EAKHIPV L LEPKVVAAL+DGGNRYCLCRGPNDG+FMV CD C++WFHG+CV LK
Sbjct: 1285 MLCSLRVLLWCTMAQWAVRKPPSVILLYDLVSQGSQLTQVDHNLLETLGHMAKRASLWEASVRDAFRGPAENVDSLIDVDTLQKLLEEAKHIPVLLSLEPKVVAALDDGGNRYCLCRGPNDGTFMVQCDDCDQWFHGSCVNLK 1427          
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Match: A0A7S2FB18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FB18_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.490e-28
Identity = 54/121 (44.63%), Postives = 75/121 (61.98%), Query Frame = 0
Query:   22 PSVVLLYDLVSQGQQLTQVDHDLLETLGTMARRASVWEAAVHDAFCAPKDNVSTPIDMKVLHTLLAEAKHIPVSLPLEPKVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACVKL 142
            P + +L+ LVS+G  L ++D  ++ TL  + +RA  W +  H     P+  V    DM +L  L  EA  IPV +P + +V + +EDGG RYCLCRG +DG FM+GCD CEEWFHG CV +
Sbjct:    3 PRLEVLHALVSRGMDL-RIDESVMATLRGLLQRAQDWSSTAHHELSKPEPAV---FDMPLLTKLKEEALTIPVRIPEDRRVTSVIEDGGGRYCLCRGASDGGFMIGCDFCEEWFHGKCVNV 119          
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Match: A0A835YJI1_9STRA (PLU-1-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJI1_9STRA)

HSP 1 Score: 115 bits (288), Expect = 5.400e-27
Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 0
Query:    5 LRVLLWCTMAQWAVRKPPSVVLLYDLVSQGQQLTQVDHDLLETLGTMARRASVWEAAVHDAFCAPKDNVSTP-------------------IDMKVLHTLLAEA-KHIPVSLPLEPKVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACVKL 142
            LRV++WC + QW++R  PS   +  L  Q + L   D  L E L  + RRA  + AAV D F AP + + T                    ID+K L  L+    + +P+    + +  AA+EDGG RYC+CRGPNDG FM+ CD CEEWFHG C  +
Sbjct: 2238 LRVVVWCAIMQWSLRARPSHYDIGPLSQQVKALKLTDPALAEVLEVIDRRARQYGAAVKDLFKAPTEQMVTKKNEPXXXXXXXXGGATADRIDLKKLQQLVERMERELPIDTKADIQARAAMEDGGYRYCVCRGPNDGRFMIQCDNCEEWFHGGCANI 2395          
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Match: B8BTQ0_THAPS (PHD-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTQ0_THAPS)

HSP 1 Score: 101 bits (252), Expect = 3.250e-23
Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 0
Query:   48 LGTMARRASVWEAAVHDAFCAPKDNVSTPIDMKVLHTLLAEAKHIPVSLPLEPKVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACVKL 142
            L +M+ RA +W+A    A  A K   + P DM +L  LL  AK IPV++P E ++++ LED G R+C+C GP+DGS M+GCD C+ W+HG+C+K+
Sbjct:    2 LKSMSSRALIWQAKAKKALLA-KAGSTQPFDMVLLKELLFAAKQIPVTMPEEARILSTLEDRGLRHCVCGGPSDGSLMLGCDNCDRWYHGSCMKV 95          
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Match: A0A6U6EWH2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6EWH2_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.400e-22
Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 0
Query:   10 WCTMAQWAVRKPPSVVLLYDLVSQ--GQQLTQVDHDLLETLGTMARRASVWEAAVHDAFCAPKDNVSTPIDMKVLHTLLAEAKHIPVSLPLEPKVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACVKLKVRQ 146
            W   A   + + P +  +  LVSQ  G      +   +  L +   RA++W+A V  A   P      P D+++L +LL  A+ IP ++P E ++   +ED GNR+CLC GP+DGSFM+ CD CE W+HGACV+L   Q
Sbjct:  135 WSLRALHVLSRKPKIEEIRSLVSQSEGVSFKLPETKCVRMLQSPLSRATLWQAKVVKALI-PIPGEKKPYDLELLSSLLQGARDIPYTMPEESQLWNTIEDDGNRHCLCGGPSDGSFMISCDKCEVWYHGACVELDKTQ 272          
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Match: A0A6U6EVL1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6EVL1_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.490e-22
Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 0
Query:   10 WCTMAQWAVRKPPSVVLLYDLVSQ--GQQLTQVDHDLLETLGTMARRASVWEAAVHDAFCAPKDNVSTPIDMKVLHTLLAEAKHIPVSLPLEPKVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACVKLKVRQ 146
            W   A   + + P +  +  LVSQ  G      +   +  L +   RA++W+A V  A   P      P D+++L +LL  A+ IP ++P E ++   +ED GNR+CLC GP+DGSFM+ CD CE W+HGACV+L   Q
Sbjct: 1643 WSLRALHVLSRKPKIEEIRSLVSQSEGVSFKLPETKCVRMLQSPLSRATLWQAKVVKALI-PIPGEKKPYDLELLSSLLQGARDIPYTMPEESQLWNTIEDDGNRHCLCGGPSDGSFMISCDKCEVWYHGACVELDKTQ 1780          
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Match: A0A7S1YRU6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YRU6_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.810e-21
Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = 0
Query:   10 WCTMAQWAVRKPPSVVLLYDLVSQGQQ--LTQVDHDLLETLGTMARRASVWEAAVHDAFCAPKDNVSTPIDMKVLHTLLAEAKHIPVSLPLEPKVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACVKL 142
            WC  A   + + P    +  LVSQ +       +   +  L +M  RAS+W+A V  A  AP      P D+ +L  L A A+ IP+ +  E ++   +ED G R+C+C GP+DGSFM+GCD C+ W+HG C++L
Sbjct:  199 WCLRAFTILARKPRNEEIKSLVSQSENNGFKLPEEKSVRMLRSMLNRASLWQAKVKKAL-APFPGEKKPFDVGLLKELKAGAREIPMIMAEEAQLSHTIEDNGARHCVCGGPSDGSFMLGCDQCDRWYHGTCLQL 332          
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Match: K0TMN3_THAOC (PHD domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TMN3_THAOC)

HSP 1 Score: 98.2 bits (243), Expect = 3.300e-21
Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 0
Query:   17 AVRKPPSVVLLYDLVS--QGQQLTQVDHDLLETLGTMARRASVWEAAVHDAFCAPKDNVSTPIDMKVLHTLLAEAKHIPVSLPLEPKVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACVKLKVRQS 147
            AV++ P V  +  L++  +  +    +   +  L +++ RA +W+A       AP        D+ +L  +L   K IP+ LP E +V   +EDGG+R+C+C GP+DGSFM+GCD+C+ WFHG   KLK+R S
Sbjct:    3 AVKQRPHVGEIRALLATIESGRFKMTESRCVRMLKSLSSRALIWQAKAKKCL-APIPGEKRKYDVAMLKVILKAVKQIPIILPEEVRVWNTIEDGGHRHCVCGGPSDGSFMMGCDSCDRWFHGYVPKLKLRTS 134          
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Match: A0A7R9U4V9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4V9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.110e-20
Identity = 56/152 (36.84%), Postives = 78/152 (51.32%), Query Frame = 0
Query:    5 LRVLLWCTMAQWAVRKPPSVVLLYDLVSQGQQLTQVDHDLLETLGTMARRASVW----EAAVHDAFCAPKDNVST------------PIDMKVLHTLLAEAKHIPVSLPLEPKVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACV 140
            LRV+ WC      + + PS+ +L  +VS+G  L   +   L  L ++ +R   W    E  +     +P +  ++            P+D+  L  L  E   IPVS     K  AALED G R+CLC  PNDG+FM+GCD+CEEWFHG CV
Sbjct: 1321 LRVVQWCVYCLRQLVRRPSIRVLRSIVSRGSVLPLPNPKPLRYLESLLKRCVAWREQYERVIQGPRYSPLNGAASRMAHPGRSADEKPVDLARLEALTKERVGIPVSGRDVEKCQAALEDEGKRWCLCGRPNDGAFMIGCDSCEEWFHGPCV 1472          
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Match: A0A7S3XNG4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNG4_HETAK)

HSP 1 Score: 91.7 bits (226), Expect = 1.550e-19
Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 0
Query:   44 LLETLGTMARRASVWEAAVHDAFCAPKDNVSTPIDMKVLHTLLAEAKHIPVSLPLEPKVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACVKL 142
            +L+ L  +  RA+ W+  V   F AP    + P ++  L  L   A+++PV+   E      LEDGG+RYC+CRGPNDGSFMV CD C+ W+HG CV +
Sbjct:   29 VLQALQELVSRATDWQGEVR-RFLAPGG--ARPYNLPALAALYEGARYLPVATRQEDIAQEVLEDGGHRYCVCRGPNDGSFMVQCDKCDAWYHGKCVNV 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27462.7514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR56_ECTSI3.280e-7078.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2FB18_9STRA1.490e-2844.63Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A835YJI1_9STRA5.400e-2739.24PLU-1-like protein-domain-containing protein n=1 T... [more]
B8BTQ0_THAPS3.250e-2346.32PHD-type domain-containing protein n=1 Tax=Thalass... [more]
A0A6U6EWH2_9STRA1.400e-2238.13Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6U6EVL1_9STRA1.490e-2238.13Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1YRU6_9STRA2.810e-2137.04Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0TMN3_THAOC3.300e-2136.84PHD domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A7R9U4V9_9STRA1.110e-2036.84Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3XNG4_HETAK1.550e-1943.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 113..146
e-value: 6.1E-9
score: 35.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 107..149
e-value: 2.2E-14
score: 54.7
IPR037869Spp1/CFP1PANTHERPTHR46174FAMILY NOT NAMEDcoord: 102..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..149
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.636
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 90..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27462contigH-paniculata_contig27462:1291..1737 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27462.7514.1mRNA_H-paniculata_contig27462.7514.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27462 1291..1737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27462.7514.1 ID=prot_H-paniculata_contig27462.7514.1|Name=mRNA_H-paniculata_contig27462.7514.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
MLCSLRVLLWCTMAQWAVRKPPSVVLLYDLVSQGQQLTQVDHDLLETLGT
MARRASVWEAAVHDAFCAPKDNVSTPIDMKVLHTLLAEAKHIPVSLPLEP
KVVAALEDGGNRYCLCRGPNDGSFMVGCDTCEEWFHGACVKLKVRQSVD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR037869Spp1/CFP1
IPR011011Znf_FYVE_PHD