mRNA_H-paniculata_contig27436.7509.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Match: A0A6H5JZI7_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI7_9PHAE) HSP 1 Score: 108 bits (271), Expect = 7.130e-26 Identity = 58/118 (49.15%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 1 YAQTLTNSQNCGELFHSEREDRNGWGENLFLCGSTDTTKDCYSAGYAMNGFYDKEVTDGPVTTYLGHATQILWKDTQEVGCAVESCEKIEQSHTWRYSVLVCNYNPTGNYLGQYEEQI 354
+A+ LT +Q LFHS +E R G+GENL++C +D+ CYS AM G Y EV V Y GHATQILWK T++VGC V C + Y LVC Y+P GNY GQYEEQ+
Sbjct: 273 HAERLT-AQCSSNLFHSTQEQRYGYGENLYMCWGSDS---CYSHERAMEGLYYDEVQSDSVLQYGGHATQILWKSTEQVGCVVARCT----NGGTPYMFLVCQYDPPGNYGGQYEEQV 382
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Match: D8LJX3_ECTSI (Pathogenesis-related protein, class 1 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX3_ECTSI) HSP 1 Score: 107 bits (268), Expect = 4.690e-25 Identity = 58/118 (49.15%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 1 YAQTLTNSQNCGELFHSEREDRNGWGENLFLCGSTDTTKDCYSAGYAMNGFYDKEVTDGPVTTYLGHATQILWKDTQEVGCAVESCEKIEQSHTWRYSVLVCNYNPTGNYLGQYEEQI 354
+A+ LT +Q LFHS +E R G+GENL++C +D+ CYS AM G Y EV V Y GHATQILWK T++VGC V C +T+ LVC Y+P GNY GQYEEQ+
Sbjct: 374 HAERLT-AQCSSSLFHSTQEQRYGYGENLYMCWGSDS---CYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVVARCTNGGTPYTF----LVCQYDPPGNYGGQYEEQV 483
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Match: D8LJW7_ECTSI (Pathogenesis-related protein, class 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW7_ECTSI) HSP 1 Score: 102 bits (254), Expect = 7.660e-24 Identity = 53/112 (47.32%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 25 QNCGELFHSEREDRNGWGENLFLCGSTDTTKDCYSAGYAMNGFYDKEVTDGPVTTYLGHATQILWKDTQEVGCAVESCEKIEQSHTWRYSVLVCNYNPTGNYLG--QYEEQI 354
Q LFHS RE R G+GENLF+C TDT CY+ YAM Y +EV VT Y+GHATQILWK T+ VGC + C +T+ LVC Y+P GN G +Y +++
Sbjct: 206 QCTSSLFHSTREQRYGYGENLFVCWGTDT---CYNHDYAMEHLYVEEVQFDDVTDYIGHATQILWKSTKNVGCVLAGCSNGGTPYTF----LVCQYDPAGNMGGDDEYRQEV 310
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Match: A0A6H5JCL1_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL1_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 5.680e-20 Identity = 53/118 (44.92%), Postives = 67/118 (56.78%), Query Frame = 1
Query: 1 YAQTLTNSQNCGELFHSEREDRNGWGENLFLCGSTDTTKDCYSAGYAMNGFYDKEVTDGPVTTYLGHATQILWKDTQEVGCAVESCEKIEQSHTWRYSVLVCNYNPTGNYLGQYEEQI 354
+A+ LT +Q LFHS +E R G+G NL++ +D+ CYS A G Y EV V Y GHATQILWK ++VGCA C H + LVC Y+P GN GQYEEQ+
Sbjct: 249 HAEGLT-AQCFSSLFHSTQEQRYGYGANLYIRWGSDS---CYSHKKATKGLYYDEVQSDSVLQYGGHATQILWKAAEQVGCAGARCTNGGTPHAF----LVCQYDPPGNSGGQYEEQV 358
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Match: D8LQY8_ECTSI (SCP-domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY8_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 8.360e-18 Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 1 YAQTLTNSQNCGELFHSEREDRNGWGENLFLCGSTDT-------TKDCYSAGYAMNGFYDKEVTDGPVTTYLGHATQILWKDTQEVGCAVESCEKIEQSHTWRYSVLVCNYNP 318
YA L + CG +E G GEN+F+C ++ + T C+S AM FYD +V GP +TY ATQ+LWK T ++GCA+ +CEK + Y +LVC Y+P
Sbjct: 133 YADLLASESMCGS---AETAHSTGLGENVFVCAASSSLSGDGAPTAACFSPESAMEAFYDSQVGGGPTSTYGPRATQVLWKSTTQIGCALRACEKDGLT----YDILVCRYSP 238
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Match: A0A6H5KE93_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE93_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.240e-17 Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 1 YAQTLTNSQNCGELFHSEREDRNGWGENLFLCGSTDT-------TKDCYSAGYAMNGFYDKEVTDGPVTTYLGHATQILWKDTQEVGCAVESCEKIEQSHTWRYSVLVCNYNP 318
YA L + CG +E G GEN+F+C ++ + T C+S AM FYD +V G +TY +ATQ+LWK T ++GCA+ +CEK Y +LVC Y+P
Sbjct: 116 YADVLASESMCGS---AEAAHSTGLGENVFVCAASSSFSGNGAPTSACFSPEIAMEAFYDSQVGGGSTSTYGPYATQVLWKSTTQIGCALRACEK----EGLTYDILVCRYSP 221
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Match: A0A388JY83_CHABU (SCP domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JY83_CHABU) HSP 1 Score: 74.7 bits (182), Expect = 1.010e-13 Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 1
Query: 1 YAQTLTNSQNCGELFHSEREDRNGWGENLFLCGSTD----TTKDCYSAGYAMNGFYDKEVTDGPVTTYLGHATQILWKDTQEVGCAVESCEKIEQSHTWRYSVLVCNYNPTGNYLGQ 339
+A+TL ++ C E++H+ G+GENL++ S+ T + + YD E GH TQ++W++T+EVGCA+ SC + T+ + VC YNP GNY+G+
Sbjct: 152 WARTL--AETC-EMYHASDS---GYGENLYMAWSSGPIDITPTEVVQSWGGERVDYDYETNTCRADRQCGHYTQMVWRNTKEVGCAITSCTLVRDGETYNAQIAVCRYNPPGNYVGE 262
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Match: A0A388JY18_CHABU (SCP domain-containing protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388JY18_CHABU) HSP 1 Score: 72.0 bits (175), Expect = 1.430e-12 Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 1
Query: 1 YAQTLTNSQNCGELFHSEREDRNGWGENLFLCGSTD----TTKDCYSAGYAMNGFYDKEVTDGPVTTYLGHATQILWKDTQEVGCAVESCEKIEQSHTWRYSVLVCNYNPTGNYLGQ 339
+AQTL N+ C +++H+ G+GENL++ S+ T A A +Y+ GH TQ++WK+T+EVGCA+ SC ++ + VC Y+P GNY+GQ
Sbjct: 190 WAQTLANT--C-QMYHASNT---GYGENLYMAWSSGAINITASGVVGAWVAEKAYYNYATNTCAAGKVCGHYTQVVWKNTKEVGCAIASC----MYGSYNAQIAVCRYSPPGNYIGQ 296
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Match: A0A1W1CJ58_9ZZZZ (SCP-like family protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1CJ58_9ZZZZ) HSP 1 Score: 69.3 bits (168), Expect = 3.010e-12 Identity = 35/89 (39.33%), Postives = 49/89 (55.06%), Query Frame = 1
Query: 73 WGENLFLCGSTDTTKDCYSAGYAMNGFYDKEVTDGPVTTYLGHATQILWKDTQEVGCAVESCEKIEQSHTWRYSVLVCNYNPTGNYLGQ 339
+GENL+ G+ + D +A Y Y+ GH TQ++WKDT EVGCA S S +W+ +++VC YNP GNY+GQ
Sbjct: 96 YGENLYASGAEASFVDAVNAWYREKAEYNTNTKTCNTGKTCGHYTQLIWKDTLEVGCAKSS------SASWK-TIVVCQYNPPGNYIGQ 177
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Match: UPI001E27AB9C (venom allergen 5.02-like n=2 Tax=Coliadinae TaxID=42450 RepID=UPI001E27AB9C) HSP 1 Score: 69.3 bits (168), Expect = 5.440e-12 Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 1
Query: 76 GENLFLCGSTDTTKDCYSAGYAMNGFYD--KEVTDGPVTT-------YLGHATQILWKDTQEVGCAVESCEKIEQSHTWRYSVLVCNYNPTGNYLGQ 339
GEN++ GSTD ++ A+N +++ K+ T GP+T+ +GH TQ++W D+ +GC + S EQ W Y VCNY P+GNYLG+
Sbjct: 96 GENIYWQGSTDKNLK-FNPENALNSWFNEHKDYTYGPLTSEQMQSKKMVGHYTQMVWSDSVYIGCGLSS----EQKDGWIYYYFVCNYGPSGNYLGE 187 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27436.7509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27436.7509.1 >prot_H-paniculata_contig27436.7509.1 ID=prot_H-paniculata_contig27436.7509.1|Name=mRNA_H-paniculata_contig27436.7509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp YAQTLTNSQNCGELFHSEREDRNGWGENLFLCGSTDTTKDCYSAGYAMNGback to top mRNA from alignment at H-paniculata_contig27436:107..1101+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27436.7509.1 ID=mRNA_H-paniculata_contig27436.7509.1|Name=mRNA_H-paniculata_contig27436.7509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=995bp|location=Sequence derived from alignment at H-paniculata_contig27436:107..1101+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27436:107..1101+ >mRNA_H-paniculata_contig27436.7509.1 ID=mRNA_H-paniculata_contig27436.7509.1|Name=mRNA_H-paniculata_contig27436.7509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=708bp|location=Sequence derived from alignment at H-paniculata_contig27436:107..1101+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |